RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 TMEM47Q9BQJ4 181 aa11.41□□□□□ -0.58
SCNM1-206ENST00000497147 SUGCTQ9HAC7 445 aa11.41□□□□□ -0.58
SCNM1-206ENST00000497147 RAVER2Q9HCJ3 691 aaKnown RBP11.41□□□□□ -0.58
SCNM1-206ENST00000497147 PDGFCQ9NRA1 345 aa11.41□□□□□ -0.58
SCNM1-206ENST00000497147 MTMR7Q9Y216 660 aa11.41□□□□□ -0.58
SCNM1-206ENST00000497147 CYP46A1Q9Y6A2 500 aa11.41□□□□□ -0.58
SCNM1-206ENST00000497147 SCN5AQ14524 2016 aa11.41□□□□□ -0.58
SCNM1-206ENST00000497147 DMDP11532 3685 aa11.4□□□□□ -0.58
SCNM1-206ENST00000497147 WDR19Q8NEZ3 1342 aa11.4□□□□□ -0.58
SCNM1-206ENST00000497147 SOWAHBA6NEL2 793 aa11.4□□□□□ -0.58
SCNM1-206ENST00000497147 KIF28PB7ZC32 967 aa11.4□□□□□ -0.58
SCNM1-206ENST00000497147 F5H6K3 240 aa11.4□□□□□ -0.58
SCNM1-206ENST00000497147 IQCF3P0C7M6 154 aa11.4□□□□□ -0.58
SCNM1-206ENST00000497147 KLRC3Q07444 240 aa11.4□□□□□ -0.58
SCNM1-206ENST00000497147 TAPT1Q6NXT6 567 aa11.4□□□□□ -0.58
SCNM1-206ENST00000497147 NFXL1Q6ZNB6 911 aa11.4□□□□□ -0.58
SCNM1-206ENST00000497147 FAM133AQ8N9E0 248 aa11.4□□□□□ -0.58
SCNM1-206ENST00000497147 PRPF38AQ8NAV1 312 aaKnown RBP11.4□□□□□ -0.58
SCNM1-206ENST00000497147 GMCL1P1Q8NEA9 526 aa11.4□□□□□ -0.58
SCNM1-206ENST00000497147 PPP1R13LQ8WUF5 828 aa11.4□□□□□ -0.58
SCNM1-206ENST00000497147 MTA3Q9BTC8 594 aa11.4□□□□□ -0.58
SCNM1-206ENST00000497147 AP5M1Q9H0R1 490 aa11.4□□□□□ -0.58
SCNM1-206ENST00000497147 MTUS1Q9ULD2 1270 aa11.4□□□□□ -0.58
SCNM1-206ENST00000497147 ZNF536O15090 1300 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 CCDC69A6NI79 296 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 ST18O60284 1047 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 ZEB2O60315 1214 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 NDUFB10O96000 172 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 SUPT20HL2P0C7V6 817 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 RPS6KB1P23443 525 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 RFC2P35250 354 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 NOVP48745 357 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 ANTXR2P58335 489 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 CCDC96Q2M329 555 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 SLFN13Q68D06 897 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 RCSD1Q6JBY9 416 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 RUFY3Q7L099 469 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 TMTC2Q8N394 836 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 PNMA1Q8ND90 353 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 PRSS33Q8NF86 280 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 CHMP4CQ96CF2 233 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 TCEANC2Q96MN5 208 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 LRRC2Q9BYS8 371 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 TM6SF1Q9BZW5 370 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 FTOQ9C0B1 505 aaKnown RBP eCLIP11.39□□□□□ -0.59
SCNM1-206ENST00000497147 SLC38A10Q9HBR0 1119 aa11.39□□□□□ -0.59
SCNM1-206ENST00000497147 ZFHX2Q9C0A1 2572 aaPredicted RBP11.39□□□□□ -0.59
SCNM1-206ENST00000497147 H3BQ06 376 aaPredicted RBP11.38□□□□□ -0.59
SCNM1-206ENST00000497147 SH2B2O14492 632 aaPredicted RBP11.38□□□□□ -0.59
SCNM1-206ENST00000497147 ZBED4O75132 1171 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 CPA1P15085 419 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 SLC1A4P43007 532 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 RBM25P49756 843 aaKnown RBP11.38□□□□□ -0.59
SCNM1-206ENST00000497147 ERVK-21P61565 698 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 WDR5P61964 334 aaKnown RBP11.38□□□□□ -0.59
SCNM1-206ENST00000497147 EXOSC10Q01780 885 aaKnown RBP11.38□□□□□ -0.59
SCNM1-206ENST00000497147 ZP2Q05996 745 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 GPNMBQ14956 572 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 SEC23AQ15436 765 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 IER5LQ5T953 404 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 SYNE3Q6ZMZ3 975 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 Q6ZUG5 572 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 CATIPQ7Z7H3 387 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 FBXO16Q8IX29 292 aaPredicted RBP11.38□□□□□ -0.59
SCNM1-206ENST00000497147 CHST13Q8NET6 341 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 NEK9Q8TD19 979 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 IGDCC4Q8TDY8 1250 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 KIFC2Q96AC6 838 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 UPF3BQ9BZI7 483 aaKnown RBP11.38□□□□□ -0.59
SCNM1-206ENST00000497147 LY9Q9HBG7 655 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 ZSWIM6Q9HCJ5 1215 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 HOMER2Q9NSB8 354 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 FBXO40Q9UH90 709 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 SLC12A7Q9Y666 1083 aa11.38□□□□□ -0.59
SCNM1-206ENST00000497147 PTPRSQ13332 1948 aa11.37□□□□□ -0.59
SCNM1-206ENST00000497147 DCHS1Q96JQ0 3298 aa11.37□□□□□ -0.59
SCNM1-206ENST00000497147 C19orf67A6NJJ6 358 aa11.37□□□□□ -0.59
SCNM1-206ENST00000497147 PITPNM1O00562 1244 aa11.37□□□□□ -0.59
SCNM1-206ENST00000497147 BAIAP3O94812 1187 aa11.37□□□□□ -0.59
SCNM1-206ENST00000497147 BMP3P12645 472 aa11.37□□□□□ -0.59
SCNM1-206ENST00000497147 LIFRP42702 1097 aa11.37□□□□□ -0.59
SCNM1-206ENST00000497147 DEFB103AP81534 67 aa11.37□□□□□ -0.59
SCNM1-206ENST00000497147 PURAQ00577 322 aaKnown RBP11.37□□□□□ -0.59
SCNM1-206ENST00000497147 IKQ13123 557 aaPredicted RBP11.37□□□□□ -0.59
SCNM1-206ENST00000497147 TCTN1Q2MV58 587 aa11.37□□□□□ -0.59
SCNM1-206ENST00000497147 IQSEC1Q6DN90 963 aa11.37□□□□□ -0.59
SCNM1-206ENST00000497147 EEPD1Q7L9B9 569 aa11.37□□□□□ -0.59
SCNM1-206ENST00000497147 DCAF4Q8WV16 495 aa11.37□□□□□ -0.59
SCNM1-206ENST00000497147 GMCL1Q96IK5 515 aa11.37□□□□□ -0.59
SCNM1-206ENST00000497147 A1CFQ9NQ94 594 aaKnown RBP11.37□□□□□ -0.59
SCNM1-206ENST00000497147 GPHNQ9NQX3 736 aaPredicted RBP11.37□□□□□ -0.59
SCNM1-206ENST00000497147 PDRG1Q9NUG6 133 aa11.37□□□□□ -0.59
SCNM1-206ENST00000497147 NAP1L2Q9ULW6 460 aaPredicted RBP11.37□□□□□ -0.59
SCNM1-206ENST00000497147 Q9Y3F1 56 aa11.37□□□□□ -0.59
SCNM1-206ENST00000497147 LINC01553A4QN01 128 aa11.36□□□□□ -0.59
SCNM1-206ENST00000497147 ASB14A6NK59 587 aa11.36□□□□□ -0.59
SCNM1-206ENST00000497147 DDAH1O94760 285 aa11.36□□□□□ -0.59
SCNM1-206ENST00000497147 PARP1P09874 1014 aaKnown RBP11.36□□□□□ -0.59
SCNM1-206ENST00000497147 STAT2P52630 851 aa11.36□□□□□ -0.59
SCNM1-206ENST00000497147 COL9A3Q14050 684 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms