RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 KPNA6O60684 536 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 CFBP00751 764 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 TIMP1P01033 207 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 MYL3P08590 195 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 ITGA7Q13683 1181 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 SEC23AQ15436 765 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 SHHQ15465 462 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 STXBP2Q15833 593 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 TMEM67Q5HYA8 995 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 ARHGEF16Q5VV41 709 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 PADI6Q6TGC4 694 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 NFXL1Q6ZNB6 911 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 CYB5R4Q7L1T6 521 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 CENPQQ7L2Z9 268 aaPredicted RBP9.1□□□□□ -0.95
SRRM1-220ENST00000496882 HOMER1Q86YM7 354 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 NSUN6Q8TEA1 469 aaKnown RBP9.1□□□□□ -0.95
SRRM1-220ENST00000496882 IWS1Q96ST2 819 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 PPP1R12CQ9BZL4 782 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 IL25Q9H293 177 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 JMJD4Q9H9V9 463 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 RBM8AQ9Y5S9 174 aaKnown RBP9.1□□□□□ -0.95
SRRM1-220ENST00000496882 MCM3APO60318 1980 aa9.1□□□□□ -0.95
SRRM1-220ENST00000496882 RBM47A0AV96 593 aaKnown RBP9.09□□□□□ -0.95
SRRM1-220ENST00000496882 SUPT20HL2P0C7V6 817 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 TXNP10599 105 aaKnown RBP9.09□□□□□ -0.95
SRRM1-220ENST00000496882 EDNRBP24530 442 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 KIF5BP33176 963 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 CDK7P50613 346 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 GRM4Q14833 912 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 FAM47CQ5HY64 1035 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 C6orf132Q5T0Z8 1188 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 RNF20Q5VTR2 975 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 MFSD5Q6N075 450 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 SEPT14Q6ZU15 432 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 FAM126BQ8IXS8 530 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 STAG2Q8N3U4 1231 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 SAMD3Q8N6K7 520 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 CTCFLQ8NI51 663 aaPredicted RBP9.09□□□□□ -0.95
SRRM1-220ENST00000496882 MAP4K1Q92918 833 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 RMDN3Q96TC7 470 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 MTG1Q9BT17 334 aaPredicted RBP9.09□□□□□ -0.95
SRRM1-220ENST00000496882 MTIF3Q9H2K0 278 aaKnown RBP9.09□□□□□ -0.95
SRRM1-220ENST00000496882 MAP3K20Q9NYL2 800 aaKnown RBP9.09□□□□□ -0.95
SRRM1-220ENST00000496882 MAD2L2Q9UI95 211 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 PCDHA1Q9Y5I3 950 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 ADGRG1Q9Y653 693 aa9.09□□□□□ -0.95
SRRM1-220ENST00000496882 DDX49Q9Y6V7 483 aaKnown RBP9.09□□□□□ -0.95
SRRM1-220ENST00000496882 DNAH12Q6ZR08 3092 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 LRRC37A2A6NM11 1700 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 LTBP2Q14767 1821 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 CCDC69A6NI79 296 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 CTAGE5O15320 804 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 GH1P01241 217 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 MCM5P33992 734 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 GNAQP50148 359 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 FOSBP53539 338 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 SMAD3P84022 425 aaKnown RBP9.08□□□□□ -0.96
SRRM1-220ENST00000496882 C9orf50Q5SZB4 431 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 FAM109BQ6ICB4 259 aaPredicted RBP9.08□□□□□ -0.96
SRRM1-220ENST00000496882 PSRC1Q6PGN9 363 aaPredicted RBP9.08□□□□□ -0.96
SRRM1-220ENST00000496882 Q7L0L9 218 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 CHST3Q7LGC8 479 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 TMTC2Q8N394 836 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 SYTL5Q8TDW5 730 aaPredicted RBP9.08□□□□□ -0.96
SRRM1-220ENST00000496882 TAAR1Q96RJ0 339 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 HIPK3Q9H422 1215 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 ANO2Q9NQ90 1003 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 SEC63Q9UGP8 760 aaKnown RBP9.08□□□□□ -0.96
SRRM1-220ENST00000496882 TBX21Q9UL17 535 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 NOD1Q9Y239 953 aa9.08□□□□□ -0.96
SRRM1-220ENST00000496882 PNMA6FA0A0J9YX94 578 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 PALM3A6NDB9 673 aaPredicted RBP9.07□□□□□ -0.96
SRRM1-220ENST00000496882 GCOM1H8Y6P7 765 aaPredicted RBP9.07□□□□□ -0.96
SRRM1-220ENST00000496882 PRC1O43663 620 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 DDAH1O94760 285 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 POLR2MP0CAP2 368 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 CALM1P0DP23 149 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 CALM2P0DP24 149 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 CALM3P0DP25 149 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 MYCLP12524 364 aaPredicted RBP9.07□□□□□ -0.96
SRRM1-220ENST00000496882 EIF2AK2P19525 551 aaKnown RBP9.07□□□□□ -0.96
SRRM1-220ENST00000496882 ITGB8P26012 769 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 CHMP4BP1P59074 171 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 PSMC6P62333 389 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 PURAQ00577 322 aaKnown RBP9.07□□□□□ -0.96
SRRM1-220ENST00000496882 KCNV1Q6PIU1 500 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 SYNE3Q6ZMZ3 975 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 SLC43A3Q8NBI5 491 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 NLRP7Q8WX94 980 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 CUL5Q93034 780 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 ZDHHC16Q969W1 377 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 RRP36Q96EU6 259 aaKnown RBP9.07□□□□□ -0.96
SRRM1-220ENST00000496882 TMEM87BQ96K49 555 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 PIGSQ96S52 555 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 LZTS2Q9BRK4 669 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 ESYT1Q9BSJ8 1104 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 MTA3Q9BTC8 594 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 PXMP2Q9NR77 195 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 MTMR10Q9NXD2 777 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 STXBP5LQ9Y2K9 1186 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 319.5 ms