RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 C2orf71A6NGG8 1288 aa5.94□□□□□ -1.46
CD46-218ENST00000496723 SEPHS1P49903 392 aa5.94□□□□□ -1.46
CD46-218ENST00000496723 RAB33AQ14088 237 aa5.94□□□□□ -1.46
CD46-218ENST00000496723 EEPD1Q7L9B9 569 aa5.94□□□□□ -1.46
CD46-218ENST00000496723 ZNF761Q86XN6 746 aaPredicted RBP5.94□□□□□ -1.46
CD46-218ENST00000496723 LINC00482Q8N8I6 264 aa5.94□□□□□ -1.46
CD46-218ENST00000496723 SPATA6Q9NWH7 488 aaPredicted RBP5.94□□□□□ -1.46
CD46-218ENST00000496723 BACE2Q9Y5Z0 518 aa5.94□□□□□ -1.46
CD46-218ENST00000496723 C1QTNF3-AMACRE9PGA6 284 aa5.93□□□□□ -1.46
CD46-218ENST00000496723 ITGAVP06756 1048 aa5.93□□□□□ -1.46
CD46-218ENST00000496723 ADAM17P78536 824 aa5.93□□□□□ -1.46
CD46-218ENST00000496723 TRIM59Q8IWR1 403 aa5.93□□□□□ -1.46
CD46-218ENST00000496723 TTC9BQ8N6N2 239 aa5.93□□□□□ -1.46
CD46-218ENST00000496723 ZBTB8AQ96BR9 441 aa5.93□□□□□ -1.46
CD46-218ENST00000496723 SAMD11Q96NU1 681 aa5.93□□□□□ -1.46
CD46-218ENST00000496723 NOX5Q96PH1 765 aa5.93□□□□□ -1.46
CD46-218ENST00000496723 MTA3Q9BTC8 594 aa5.93□□□□□ -1.46
CD46-218ENST00000496723 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.93□□□□□ -1.46
CD46-218ENST00000496723 RWDD3Q9Y3V2 267 aa5.93□□□□□ -1.46
CD46-218ENST00000496723 U2SURPO15042 1029 aaKnown RBP5.92□□□□□ -1.46
CD46-218ENST00000496723 SMARCA5O60264 1052 aaPredicted RBP5.92□□□□□ -1.46
CD46-218ENST00000496723 CYP2C8P10632 490 aa5.92□□□□□ -1.46
CD46-218ENST00000496723 PAMP19021 973 aa5.92□□□□□ -1.46
CD46-218ENST00000496723 KIAA2012Q0VF49 1180 aa5.92□□□□□ -1.46
CD46-218ENST00000496723 CPZQ66K79 652 aa5.92□□□□□ -1.46
CD46-218ENST00000496723 WWC2Q6AWC2 1192 aa5.92□□□□□ -1.46
CD46-218ENST00000496723 GTF2IRD2BQ6EKJ0 949 aa5.92□□□□□ -1.46
CD46-218ENST00000496723 GTF2IRD2Q86UP8 949 aa5.92□□□□□ -1.46
CD46-218ENST00000496723 ZNF227Q86WZ6 799 aa5.92□□□□□ -1.46
CD46-218ENST00000496723 USP33Q8TEY7 942 aa5.92□□□□□ -1.46
CD46-218ENST00000496723 MRGPRX3Q96LB0 322 aa5.92□□□□□ -1.46
CD46-218ENST00000496723 C1QTNF3Q9BXJ4 246 aa5.92□□□□□ -1.46
CD46-218ENST00000496723 FBLN5Q9UBX5 448 aa5.92□□□□□ -1.46
CD46-218ENST00000496723 NPHP3-ACAD11A0A0J9YXS1 232 aa5.91□□□□□ -1.46
CD46-218ENST00000496723 TBX1O43435 398 aa5.91□□□□□ -1.46
CD46-218ENST00000496723 PPP1R11O60927 126 aaPredicted RBP5.91□□□□□ -1.46
CD46-218ENST00000496723 TNFRSF1AP19438 455 aa5.91□□□□□ -1.46
CD46-218ENST00000496723 SCRN1Q12765 414 aa5.91□□□□□ -1.46
CD46-218ENST00000496723 SF3A1Q15459 793 aaKnown RBP5.91□□□□□ -1.46
CD46-218ENST00000496723 SLC10A6Q3KNW5 377 aa5.91□□□□□ -1.46
CD46-218ENST00000496723 ADAMTS17Q8TE56 1095 aa5.91□□□□□ -1.46
CD46-218ENST00000496723 BTN2A2Q8WVV5 523 aa5.91□□□□□ -1.46
CD46-218ENST00000496723 HIRIP3Q9BW71 556 aaPredicted RBP5.91□□□□□ -1.46
CD46-218ENST00000496723 EPN3Q9H201 632 aa5.91□□□□□ -1.46
CD46-218ENST00000496723 BCAS3Q9H6U6 928 aa5.91□□□□□ -1.46
CD46-218ENST00000496723 RXFP1Q9HBX9 757 aa5.91□□□□□ -1.46
CD46-218ENST00000496723 AGRPO00253 132 aa5.9□□□□□ -1.46
CD46-218ENST00000496723 NPHS1O60500 1241 aa5.9□□□□□ -1.46
CD46-218ENST00000496723 PLATP00750 562 aa5.9□□□□□ -1.46
CD46-218ENST00000496723 RPL13P26373 211 aaKnown RBP5.9□□□□□ -1.46
CD46-218ENST00000496723 FAM124AQ86V42 546 aa5.9□□□□□ -1.46
CD46-218ENST00000496723 COPS5Q92905 334 aa5.9□□□□□ -1.46
CD46-218ENST00000496723 ARMC5Q96C12 935 aa5.9□□□□□ -1.46
CD46-218ENST00000496723 NKX2-4Q9H2Z4 354 aa5.9□□□□□ -1.46
CD46-218ENST00000496723 GPRC5CQ9NQ84 441 aa5.9□□□□□ -1.46
CD46-218ENST00000496723 CYP26B1Q9NR63 512 aa5.9□□□□□ -1.46
CD46-218ENST00000496723 GULP1Q9UBP9 304 aa5.9□□□□□ -1.46
CD46-218ENST00000496723 CCDC85CA6NKD9 419 aa5.89□□□□□ -1.47
CD46-218ENST00000496723 ZXDAP98168 799 aa5.89□□□□□ -1.47
CD46-218ENST00000496723 FAM26FQ5R3K3 315 aa5.89□□□□□ -1.47
CD46-218ENST00000496723 NBPF6Q5VWK0 638 aa5.89□□□□□ -1.47
CD46-218ENST00000496723 CPNE8Q86YQ8 564 aa5.89□□□□□ -1.47
CD46-218ENST00000496723 DCP2Q8IU60 420 aaKnown RBP5.89□□□□□ -1.47
CD46-218ENST00000496723 LGI4Q8N135 537 aa5.89□□□□□ -1.47
CD46-218ENST00000496723 SREK1Q8WXA9 508 aaKnown RBP5.89□□□□□ -1.47
CD46-218ENST00000496723 DDX11Q96FC9 970 aa5.89□□□□□ -1.47
CD46-218ENST00000496723 NBPF4Q96M43 638 aa5.89□□□□□ -1.47
CD46-218ENST00000496723 C11orf84Q9BUA3 381 aaPredicted RBP5.89□□□□□ -1.47
CD46-218ENST00000496723 CLEC1BQ9P126 229 aa5.89□□□□□ -1.47
CD46-218ENST00000496723 C7orf72A4D263 438 aa5.88□□□□□ -1.47
CD46-218ENST00000496723 THBDP07204 575 aa5.88□□□□□ -1.47
CD46-218ENST00000496723 SNRPB2P08579 225 aaKnown RBP5.88□□□□□ -1.47
CD46-218ENST00000496723 PLS3P13797 630 aa5.88□□□□□ -1.47
CD46-218ENST00000496723 HOXC12P31275 282 aa5.88□□□□□ -1.47
CD46-218ENST00000496723 THBS2P35442 1172 aa5.88□□□□□ -1.47
CD46-218ENST00000496723 ECI1P42126 302 aa5.88□□□□□ -1.47
CD46-218ENST00000496723 RBL2Q08999 1139 aa5.88□□□□□ -1.47
CD46-218ENST00000496723 SMAD4Q13485 552 aaKnown RBP5.88□□□□□ -1.47
CD46-218ENST00000496723 SF1Q15637 639 aaKnown RBP5.88□□□□□ -1.47
CD46-218ENST00000496723 RGL3Q3MIN7 710 aa5.88□□□□□ -1.47
CD46-218ENST00000496723 TBC1D10BQ4KMP7 808 aaPredicted RBP5.88□□□□□ -1.47
CD46-218ENST00000496723 BORAQ6PGQ7 559 aa5.88□□□□□ -1.47
CD46-218ENST00000496723 ETV3LQ6ZN32 361 aa5.88□□□□□ -1.47
CD46-218ENST00000496723 TTLL6Q8N841 843 aa5.88□□□□□ -1.47
CD46-218ENST00000496723 KYQ8NBH2 561 aa5.88□□□□□ -1.47
CD46-218ENST00000496723 GORASP1Q9BQQ3 440 aa5.88□□□□□ -1.47
CD46-218ENST00000496723 AP5M1Q9H0R1 490 aa5.88□□□□□ -1.47
CD46-218ENST00000496723 A0A1W2PQU0 124 aa5.87□□□□□ -1.47
CD46-218ENST00000496723 MATN3O15232 486 aa5.87□□□□□ -1.47
CD46-218ENST00000496723 AKAP8O43823 692 aaKnown RBP5.87□□□□□ -1.47
CD46-218ENST00000496723 NTRK1P04629 796 aa5.87□□□□□ -1.47
CD46-218ENST00000496723 C8BP07358 591 aa5.87□□□□□ -1.47
CD46-218ENST00000496723 ZNF20P17024 532 aa5.87□□□□□ -1.47
CD46-218ENST00000496723 KCNJ6P48051 423 aa5.87□□□□□ -1.47
CD46-218ENST00000496723 PPP2R2AP63151 447 aa5.87□□□□□ -1.47
CD46-218ENST00000496723 CYP4F3Q08477 520 aa5.87□□□□□ -1.47
CD46-218ENST00000496723 ST13P5Q8NFI4 369 aaPredicted RBP5.87□□□□□ -1.47
CD46-218ENST00000496723 PLEKHO2Q8TD55 490 aa5.87□□□□□ -1.47
CD46-218ENST00000496723 LOXL4Q96JB6 756 aa5.87□□□□□ -1.47
CD46-218ENST00000496723 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms