RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 TSPY2A6NKD2 308 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 H3BNC9 293 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 RNF113AO15541 343 aaKnown RBP11.41□□□□□ -0.58
SH3D21-204ENST00000496636 LGR5O75473 907 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 GH1P01241 217 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 CENPBP07199 599 aaPredicted RBP11.41□□□□□ -0.58
SH3D21-204ENST00000496636 MS4A1P11836 297 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 CASTP20810 708 aaKnown RBP11.41□□□□□ -0.58
SH3D21-204ENST00000496636 IRS1P35568 1242 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 SNAP25P60880 206 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 PTK7Q13308 1070 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 EPC2Q52LR7 807 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 SYDE2Q5VT97 1194 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 BTNL9Q6UXG8 535 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 BMP8AQ7Z5Y6 402 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 C7orf31Q8N865 590 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 PPP1R13LQ8WUF5 828 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 AFG1LQ8WV93 481 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 COPS5Q92905 334 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 GPATCH3Q96I76 525 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 MAF1Q9H063 256 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 NAPBQ9H115 298 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 ECHDC1Q9NTX5 307 aa11.41□□□□□ -0.58
SH3D21-204ENST00000496636 SPTBN4Q9H254 2564 aa11.4□□□□□ -0.58
SH3D21-204ENST00000496636 PATL2C9JE40 543 aaKnown RBP11.4□□□□□ -0.58
SH3D21-204ENST00000496636 RPS6P62753 249 aaKnown RBP11.4□□□□□ -0.58
SH3D21-204ENST00000496636 HNRNPUQ00839 825 aaKnown RBP eCLIP11.4□□□□□ -0.58
SH3D21-204ENST00000496636 PPARAQ07869 468 aa11.4□□□□□ -0.58
SH3D21-204ENST00000496636 GPM6BQ13491 265 aa11.4□□□□□ -0.58
SH3D21-204ENST00000496636 SMAD2Q15796 467 aaKnown RBP11.4□□□□□ -0.58
SH3D21-204ENST00000496636 DGKDQ16760 1214 aa11.4□□□□□ -0.58
SH3D21-204ENST00000496636 TCEAL5Q5H9L2 206 aa11.4□□□□□ -0.58
SH3D21-204ENST00000496636 EP400NLQ6ZTU2 488 aa11.4□□□□□ -0.58
SH3D21-204ENST00000496636 FBXO11Q86XK2 927 aa11.4□□□□□ -0.58
SH3D21-204ENST00000496636 SUGP1Q8IWZ8 645 aaKnown RBP11.4□□□□□ -0.58
SH3D21-204ENST00000496636 IFNL3Q8IZI9 196 aa11.4□□□□□ -0.58
SH3D21-204ENST00000496636 MYOCDQ8IZQ8 938 aa11.4□□□□□ -0.58
SH3D21-204ENST00000496636 YME1L1Q96TA2 773 aa11.4□□□□□ -0.58
SH3D21-204ENST00000496636 LRRCC1Q9C099 1032 aa11.4□□□□□ -0.58
SH3D21-204ENST00000496636 LMAN2LQ9H0V9 348 aa11.4□□□□□ -0.58
SH3D21-204ENST00000496636 CLDND1Q9NY35 253 aa11.4□□□□□ -0.58
SH3D21-204ENST00000496636 ARIH2O95376 493 aa11.39□□□□□ -0.59
SH3D21-204ENST00000496636 F2P00734 622 aa11.39□□□□□ -0.59
SH3D21-204ENST00000496636 ARHGAP1Q07960 439 aa11.39□□□□□ -0.59
SH3D21-204ENST00000496636 MKRN4PQ13434 485 aaPredicted RBP11.39□□□□□ -0.59
SH3D21-204ENST00000496636 SMAD4Q13485 552 aaKnown RBP11.39□□□□□ -0.59
SH3D21-204ENST00000496636 CCDC62Q6P9F0 684 aa11.39□□□□□ -0.59
SH3D21-204ENST00000496636 TRAF7Q6Q0C0 670 aa11.39□□□□□ -0.59
SH3D21-204ENST00000496636 RPAINQ86UA6 219 aa11.39□□□□□ -0.59
SH3D21-204ENST00000496636 PRSS33Q8NF86 280 aa11.39□□□□□ -0.59
SH3D21-204ENST00000496636 CLEC4DQ8WXI8 215 aa11.39□□□□□ -0.59
SH3D21-204ENST00000496636 KAT2BQ92831 832 aa11.39□□□□□ -0.59
SH3D21-204ENST00000496636 EMID1Q96A84 441 aaPredicted RBP11.39□□□□□ -0.59
SH3D21-204ENST00000496636 IRF2BPLQ9H1B7 796 aa11.39□□□□□ -0.59
SH3D21-204ENST00000496636 CHMP4BQ9H444 224 aaKnown RBP11.39□□□□□ -0.59
SH3D21-204ENST00000496636 MUTYHQ9UIF7 546 aa11.39□□□□□ -0.59
SH3D21-204ENST00000496636 DDX19BQ9UMR2 479 aa11.39□□□□□ -0.59
SH3D21-204ENST00000496636 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.39□□□□□ -0.59
SH3D21-204ENST00000496636 M0R2C6 588 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 NOVP48745 357 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 PSEN2P49810 448 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 MBTPS1Q14703 1052 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 TCTN1Q2MV58 587 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 TRIM71Q2Q1W2 868 aaKnown RBP11.38□□□□□ -0.59
SH3D21-204ENST00000496636 ZNF618Q5T7W0 954 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 RASGRP2Q7LDG7 609 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 SIRT2Q8IXJ6 389 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 TMEM192Q8IY95 271 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 RGS22Q8NE09 1264 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 PANK1Q8TE04 598 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 EDAQ92838 391 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 CHMP4CQ96CF2 233 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 HDAC6Q9UBN7 1215 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 RWDD3Q9Y3V2 267 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 TECTAO75443 2155 aa11.38□□□□□ -0.59
SH3D21-204ENST00000496636 PTPRZ1P23471 2315 aaPredicted RBP11.37□□□□□ -0.59
SH3D21-204ENST00000496636 RSPH10B2B2RC85 870 aa11.37□□□□□ -0.59
SH3D21-204ENST00000496636 CAND2O75155 1236 aa11.37□□□□□ -0.59
SH3D21-204ENST00000496636 RSPH10BP0C881 870 aa11.37□□□□□ -0.59
SH3D21-204ENST00000496636 TOP1P11387 765 aaKnown RBP11.37□□□□□ -0.59
SH3D21-204ENST00000496636 SLC16A2P36021 539 aa11.37□□□□□ -0.59
SH3D21-204ENST00000496636 MFSD10Q14728 455 aa11.37□□□□□ -0.59
SH3D21-204ENST00000496636 CTC1Q2NKJ3 1217 aa11.37□□□□□ -0.59
SH3D21-204ENST00000496636 PLEKHG4Q58EX7 1191 aa11.37□□□□□ -0.59
SH3D21-204ENST00000496636 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.37□□□□□ -0.59
SH3D21-204ENST00000496636 TRIM67Q6ZTA4 783 aa11.37□□□□□ -0.59
SH3D21-204ENST00000496636 RNF135Q8IUD6 432 aa11.37□□□□□ -0.59
SH3D21-204ENST00000496636 DBF4BQ8NFT6 615 aa11.37□□□□□ -0.59
SH3D21-204ENST00000496636 SEPT8Q92599 483 aa11.37□□□□□ -0.59
SH3D21-204ENST00000496636 C11orf84Q9BUA3 381 aaPredicted RBP11.37□□□□□ -0.59
SH3D21-204ENST00000496636 IL17RBQ9NRM6 502 aa11.37□□□□□ -0.59
SH3D21-204ENST00000496636 MTMR7Q9Y216 660 aa11.37□□□□□ -0.59
SH3D21-204ENST00000496636 RIF1Q5UIP0 2472 aaKnown RBP11.36□□□□□ -0.59
SH3D21-204ENST00000496636 C5orf42Q9H799 3197 aa11.36□□□□□ -0.59
SH3D21-204ENST00000496636 TMEM221A6NGB7 291 aa11.36□□□□□ -0.59
SH3D21-204ENST00000496636 M0R296 226 aa11.36□□□□□ -0.59
SH3D21-204ENST00000496636 HAS3O00219 553 aa11.36□□□□□ -0.59
SH3D21-204ENST00000496636 MBTPS2O43462 519 aa11.36□□□□□ -0.59
SH3D21-204ENST00000496636 GFRA3O60609 400 aa11.36□□□□□ -0.59
SH3D21-204ENST00000496636 RB1P06400 928 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms