RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SEMA6BQ9H3T3 888 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 HAUS4Q9H6D7 363 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 A0A0U1RQJ8 604 aa12.33□□□□□ -0.44
CMSS1-208ENST00000496116 A0A1W2PQJ5 194 aa12.33□□□□□ -0.44
CMSS1-208ENST00000496116 MEA1Q16626 185 aa12.33□□□□□ -0.44
CMSS1-208ENST00000496116 MIIPQ5JXC2 388 aa12.33□□□□□ -0.44
CMSS1-208ENST00000496116 HYIQ5T013 277 aa12.33□□□□□ -0.44
CMSS1-208ENST00000496116 FOXR2Q6PJQ5 311 aa12.33□□□□□ -0.44
CMSS1-208ENST00000496116 MOXD1Q6UVY6 613 aa12.33□□□□□ -0.44
CMSS1-208ENST00000496116 SRGAP1Q7Z6B7 1085 aa12.33□□□□□ -0.44
CMSS1-208ENST00000496116 SLFN12Q8IYM2 578 aa12.33□□□□□ -0.44
CMSS1-208ENST00000496116 SLC35F6Q8N357 371 aa12.33□□□□□ -0.44
CMSS1-208ENST00000496116 ATRIPQ8WXE1 791 aa12.33□□□□□ -0.44
CMSS1-208ENST00000496116 HPS3Q969F9 1004 aa12.33□□□□□ -0.44
CMSS1-208ENST00000496116 NUDT12Q9BQG2 462 aa12.33□□□□□ -0.44
CMSS1-208ENST00000496116 ANO3Q9BYT9 981 aa12.33□□□□□ -0.44
CMSS1-208ENST00000496116 SCN9AQ15858 1988 aa12.33□□□□□ -0.44
CMSS1-208ENST00000496116 FAM196BA6NMK8 535 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 USP17L15C9J2P7 530 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 USP17L13C9JLJ4 530 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 USP17L11C9JVI0 530 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 USP17L18D6R9N7 530 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 USP17L22D6RA61 530 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 USP17L17D6RBQ6 530 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 USP17L19D6RCP7 530 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 USP17L20D6RJB6 530 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 ARHGAP25P42331 645 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 USP17L24Q0WX57 530 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 ABCB5Q2M3G0 1257 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 ZNF772Q68DY9 489 aaPredicted RBP12.32□□□□□ -0.44
CMSS1-208ENST00000496116 USP17L6PQ6QN14 398 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 CCDC170Q8IYT3 715 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 GMCL1P1Q8NEA9 526 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 EEF2KMTQ96G04 330 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 AMNQ9BXJ7 453 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 PCDHAC2Q9Y5I4 1007 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 ARFGEF1Q9Y6D6 1849 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 CYP3A7-CYP3A51PA0A087WV96 503 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 F5H6K3 240 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 ENTPD3O75355 529 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 SLURP2P0DP57 97 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 CYP3A7P24462 503 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 CHMP4BP1P59074 171 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 KLRC3Q07444 240 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 EHHADHQ08426 723 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 MAN2A1Q16706 1144 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 VWA3BQ502W6 1294 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 HAUS3Q68CZ6 603 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 WDR59Q6PJI9 974 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 SH3BP5LQ7L8J4 393 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
CMSS1-208ENST00000496116 EHBP1Q8NDI1 1231 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 SUPT20HQ8NEM7 779 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 GMCL1Q96IK5 515 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 AGPAT5Q9NUQ2 364 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 ZNF446Q9NWS9 450 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 SLX4Q8IY92 1834 aa12.32□□□□□ -0.44
CMSS1-208ENST00000496116 ATRNL1Q5VV63 1379 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 KRT86O43790 486 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 CDK17Q00537 523 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 IKQ13123 557 aaPredicted RBP12.31□□□□□ -0.44
CMSS1-208ENST00000496116 ZNF662Q6ZS27 426 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 KCNK18Q7Z418 384 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 MYOCDQ8IZQ8 938 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 NDST4Q9H3R1 872 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 KCNMB3Q9NPA1 279 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 FAM53CQ9NYF3 392 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 ZNF219Q9P2Y4 722 aaPredicted RBP12.31□□□□□ -0.44
CMSS1-208ENST00000496116 GUCA1BQ9UMX6 200 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 ZNF646O15015 1829 aaPredicted RBP12.31□□□□□ -0.44
CMSS1-208ENST00000496116 SPDYE3A6NKU9 549 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 ATP8B1O43520 1251 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 KIF20AO95235 890 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 GDF11O95390 407 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 COASYQ13057 564 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 ECM1Q16610 540 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 AOC3Q16853 763 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 WHAMMP3Q1A5X7 153 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 RBM26Q5T8P6 1007 aaKnown RBP12.31□□□□□ -0.44
CMSS1-208ENST00000496116 CC2D2BQ6DHV5 1058 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 KIAA1328Q86T90 577 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 FBXO11Q86XK2 927 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 CCDC65Q8IXS2 484 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 NHEJ1Q9H9Q4 299 aaPredicted RBP12.31□□□□□ -0.44
CMSS1-208ENST00000496116 PANK4Q9NVE7 773 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 KIAA1024Q9UPX6 916 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 STK24Q9Y6E0 443 aa12.31□□□□□ -0.44
CMSS1-208ENST00000496116 EIF3CLB5ME19 914 aaKnown RBP12.3□□□□□ -0.44
CMSS1-208ENST00000496116 MEIS2O14770 477 aa12.3□□□□□ -0.44
CMSS1-208ENST00000496116 TBX3O15119 743 aa12.3□□□□□ -0.44
CMSS1-208ENST00000496116 FOSP01100 380 aaPredicted RBP12.3□□□□□ -0.44
CMSS1-208ENST00000496116 SSBP05455 408 aaKnown RBP eCLIP12.3□□□□□ -0.44
CMSS1-208ENST00000496116 KLK7P49862 253 aa12.3□□□□□ -0.44
CMSS1-208ENST00000496116 FAM26FQ5R3K3 315 aa12.3□□□□□ -0.44
CMSS1-208ENST00000496116 CCDC122Q5T0U0 273 aa12.3□□□□□ -0.44
CMSS1-208ENST00000496116 ERMNQ8TAM6 284 aa12.3□□□□□ -0.44
CMSS1-208ENST00000496116 DNAJC19Q96DA6 116 aa12.3□□□□□ -0.44
CMSS1-208ENST00000496116 MBOAT7Q96N66 472 aa12.3□□□□□ -0.44
CMSS1-208ENST00000496116 EIF3CQ99613 913 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms