RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 SRRDQ9UH36 339 aa7.49□□□□□ -1.21
CLTC-208ENST00000496076 ST6GALNAC2Q9UJ37 374 aa7.49□□□□□ -1.21
CLTC-208ENST00000496076 EMC9Q9Y3B6 208 aa7.49□□□□□ -1.21
CLTC-208ENST00000496076 ANKRD34BA5PLL1 514 aa7.48□□□□□ -1.21
CLTC-208ENST00000496076 THBDP07204 575 aa7.48□□□□□ -1.21
CLTC-208ENST00000496076 MILR1Q7Z6M3 343 aa7.48□□□□□ -1.21
CLTC-208ENST00000496076 INF2Q27J81 1249 aa7.47□□□□□ -1.21
CLTC-208ENST00000496076 POMZP3Q6PJE2 187 aa7.47□□□□□ -1.21
CLTC-208ENST00000496076 VHLLQ6RSH7 139 aa7.47□□□□□ -1.21
CLTC-208ENST00000496076 LCORQ96JN0 433 aaPredicted RBP7.47□□□□□ -1.21
CLTC-208ENST00000496076 APBA2Q99767 749 aa7.47□□□□□ -1.21
CLTC-208ENST00000496076 SUV39H1O43463 412 aa7.46□□□□□ -1.22
CLTC-208ENST00000496076 STAT5AP42229 794 aa7.46□□□□□ -1.22
CLTC-208ENST00000496076 FAM126BQ8IXS8 530 aa7.46□□□□□ -1.22
CLTC-208ENST00000496076 BVESQ8NE79 360 aa7.46□□□□□ -1.22
CLTC-208ENST00000496076 SLC6A11P48066 632 aa7.45□□□□□ -1.22
CLTC-208ENST00000496076 SPRED1Q7Z699 444 aa7.45□□□□□ -1.22
CLTC-208ENST00000496076 CRACR2BQ8N4Y2 399 aaPredicted RBP7.45□□□□□ -1.22
CLTC-208ENST00000496076 SH3RF3Q8TEJ3 882 aaPredicted RBP7.45□□□□□ -1.22
CLTC-208ENST00000496076 GPRASP2Q96D09 838 aa7.45□□□□□ -1.22
CLTC-208ENST00000496076 SHDQ96IW2 340 aa7.45□□□□□ -1.22
CLTC-208ENST00000496076 SORCS2Q96PQ0 1159 aa7.45□□□□□ -1.22
CLTC-208ENST00000496076 NGRNQ9NPE2 291 aaKnown RBP7.45□□□□□ -1.22
CLTC-208ENST00000496076 CYP26B1Q9NR63 512 aa7.45□□□□□ -1.22
CLTC-208ENST00000496076 C9orf118A6NHY6 69 aa7.44□□□□□ -1.22
CLTC-208ENST00000496076 NOP56O00567 594 aaKnown RBP7.44□□□□□ -1.22
CLTC-208ENST00000496076 LAMTOR5O43504 91 aa7.44□□□□□ -1.22
CLTC-208ENST00000496076 B4GALT3O60512 393 aa7.44□□□□□ -1.22
CLTC-208ENST00000496076 C6P13671 934 aa7.44□□□□□ -1.22
CLTC-208ENST00000496076 FPR2P25090 351 aa7.44□□□□□ -1.22
CLTC-208ENST00000496076 CASP7P55210 303 aa7.44□□□□□ -1.22
CLTC-208ENST00000496076 SURF1Q15526 300 aa7.44□□□□□ -1.22
CLTC-208ENST00000496076 CR1LQ2VPA4 569 aa7.44□□□□□ -1.22
CLTC-208ENST00000496076 MROH9Q5TGP6 573 aa7.44□□□□□ -1.22
CLTC-208ENST00000496076 PRAMEF18Q5VWM3 479 aa7.44□□□□□ -1.22
CLTC-208ENST00000496076 GTF2IRD2BQ6EKJ0 949 aa7.44□□□□□ -1.22
CLTC-208ENST00000496076 GTF2IRD2Q86UP8 949 aa7.44□□□□□ -1.22
CLTC-208ENST00000496076 RASGRP4Q8TDF6 673 aa7.44□□□□□ -1.22
CLTC-208ENST00000496076 KISS1RQ969F8 398 aaPredicted RBP7.44□□□□□ -1.22
CLTC-208ENST00000496076 TIMM13Q9Y5L4 95 aaPredicted RBP7.44□□□□□ -1.22
CLTC-208ENST00000496076 CYP1A1P04798 512 aaPredicted RBP7.43□□□□□ -1.22
CLTC-208ENST00000496076 RPL11P62913 178 aaKnown RBP7.43□□□□□ -1.22
CLTC-208ENST00000496076 NKX3-2P78367 333 aa7.43□□□□□ -1.22
CLTC-208ENST00000496076 ADAM9Q13443 819 aa7.43□□□□□ -1.22
CLTC-208ENST00000496076 IQCEQ6IPM2 695 aa7.43□□□□□ -1.22
CLTC-208ENST00000496076 CEP68Q76N32 757 aa7.43□□□□□ -1.22
CLTC-208ENST00000496076 RIOX2Q8IUF8 465 aa7.43□□□□□ -1.22
CLTC-208ENST00000496076 FRS2Q8WU20 508 aa7.43□□□□□ -1.22
CLTC-208ENST00000496076 PPP1R14AQ96A00 147 aa7.43□□□□□ -1.22
CLTC-208ENST00000496076 YIPF4Q9BSR8 244 aa7.43□□□□□ -1.22
CLTC-208ENST00000496076 SCAND2PQ9GZW5 306 aaPredicted RBP7.43□□□□□ -1.22
CLTC-208ENST00000496076 PPP4R1LQ9P1A2 415 aa7.43□□□□□ -1.22
CLTC-208ENST00000496076 ZNF28P17035 718 aa7.42□□□□□ -1.22
CLTC-208ENST00000496076 TRIM59Q8IWR1 403 aa7.42□□□□□ -1.22
CLTC-208ENST00000496076 NPLOC4Q8TAT6 608 aa7.42□□□□□ -1.22
CLTC-208ENST00000496076 CPLX3Q8WVH0 158 aa7.42□□□□□ -1.22
CLTC-208ENST00000496076 TRMT2BQ96GJ1 504 aaKnown RBP7.42□□□□□ -1.22
CLTC-208ENST00000496076 NKX2-4Q9H2Z4 354 aa7.42□□□□□ -1.22
CLTC-208ENST00000496076 TSC22D4Q9Y3Q8 395 aa7.42□□□□□ -1.22
CLTC-208ENST00000496076 X6R8D5 127 aa7.42□□□□□ -1.22
CLTC-208ENST00000496076 NPEPPSL1A6NEC2 478 aa7.41□□□□□ -1.22
CLTC-208ENST00000496076 SCAMP3O14828 347 aaKnown RBP7.41□□□□□ -1.22
CLTC-208ENST00000496076 NAT2P11245 290 aa7.41□□□□□ -1.22
CLTC-208ENST00000496076 TACR2P21452 398 aa7.41□□□□□ -1.22
CLTC-208ENST00000496076 IL13P35225 146 aa7.41□□□□□ -1.22
CLTC-208ENST00000496076 BCL6P41182 706 aa7.41□□□□□ -1.22
CLTC-208ENST00000496076 GDF5P43026 501 aa7.41□□□□□ -1.22
CLTC-208ENST00000496076 NASPP49321 788 aaPredicted RBP7.41□□□□□ -1.22
CLTC-208ENST00000496076 CYP4F3Q08477 520 aa7.41□□□□□ -1.22
CLTC-208ENST00000496076 ICAM4Q14773 271 aa7.41□□□□□ -1.22
CLTC-208ENST00000496076 CDSNQ15517 529 aa7.41□□□□□ -1.22
CLTC-208ENST00000496076 PLEKHH3Q7Z736 793 aa7.41□□□□□ -1.22
CLTC-208ENST00000496076 MRGPRX3Q96LB0 322 aa7.41□□□□□ -1.22
CLTC-208ENST00000496076 LGR4Q9BXB1 951 aa7.41□□□□□ -1.22
CLTC-208ENST00000496076 ZNF143P52747 638 aaPredicted RBP7.4□□□□□ -1.22
CLTC-208ENST00000496076 METTL16Q86W50 562 aaKnown RBP7.4□□□□□ -1.22
CLTC-208ENST00000496076 Q8N1X5 172 aa7.4□□□□□ -1.22
CLTC-208ENST00000496076 FAM169BQ8N8A8 192 aa7.4□□□□□ -1.22
CLTC-208ENST00000496076 KLC2Q9H0B6 622 aa7.4□□□□□ -1.22
CLTC-208ENST00000496076 TMEM168Q9H0V1 697 aa7.4□□□□□ -1.22
CLTC-208ENST00000496076 L2HGDHQ9H9P8 463 aa7.4□□□□□ -1.22
CLTC-208ENST00000496076 ARNTLO00327 626 aa7.39□□□□□ -1.23
CLTC-208ENST00000496076 HMGA2P52926 109 aa7.39□□□□□ -1.23
CLTC-208ENST00000496076 CCDC103Q8IW40 242 aa7.39□□□□□ -1.23
CLTC-208ENST00000496076 Q8N1Y9 231 aa7.39□□□□□ -1.23
CLTC-208ENST00000496076 DIO2Q92813 273 aa7.39□□□□□ -1.23
CLTC-208ENST00000496076 MBD6Q96DN6 1003 aa7.39□□□□□ -1.23
CLTC-208ENST00000496076 TMEM169Q96HH4 297 aa7.39□□□□□ -1.23
CLTC-208ENST00000496076 ZSWIM3Q96MP5 696 aa7.39□□□□□ -1.23
CLTC-208ENST00000496076 YTHDC1Q96MU7 727 aaKnown RBP7.39□□□□□ -1.23
CLTC-208ENST00000496076 TMEFF2Q9UIK5 374 aaPredicted RBP7.39□□□□□ -1.23
CLTC-208ENST00000496076 GPR42O15529 346 aa7.38□□□□□ -1.23
CLTC-208ENST00000496076 GTF2A2P52657 109 aa7.38□□□□□ -1.23
CLTC-208ENST00000496076 MLLT6P55198 1093 aaPredicted RBP7.38□□□□□ -1.23
CLTC-208ENST00000496076 E4F1Q66K89 784 aaPredicted RBP7.38□□□□□ -1.23
CLTC-208ENST00000496076 NLRP10Q86W26 655 aa7.38□□□□□ -1.23
CLTC-208ENST00000496076 TOE1Q96GM8 510 aaKnown RBP7.38□□□□□ -1.23
CLTC-208ENST00000496076 CLIC6Q96NY7 704 aa7.38□□□□□ -1.23
CLTC-208ENST00000496076 CDK5RAP1Q96SZ6 601 aaKnown RBP7.38□□□□□ -1.23
CLTC-208ENST00000496076 MRIQ9BWK5 157 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms