RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 STRIP1Q5VSL9 837 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 MCTP2Q6DN12 878 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 RCSD1Q6JBY9 416 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 KRT25Q7Z3Z0 450 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 CCDC82Q8N4S0 544 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 SRBD1Q8N5C6 995 aaKnown RBP9.77□□□□□ -0.85
EPHA4-213ENST00000495693 IQUBQ8NA54 791 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 CCDC150Q8NCX0 1101 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 ZNF358Q9NW07 568 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 RMND1Q9NWS8 449 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 BARHL2Q9NY43 387 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 SERPINB13Q9UIV8 391 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 SYNPO2Q9UMS6 1093 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 TTF2Q9UNY4 1162 aaKnown RBP9.77□□□□□ -0.85
EPHA4-213ENST00000495693 DAGLAQ9Y4D2 1042 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.77□□□□□ -0.85
EPHA4-213ENST00000495693 A6NJY4 79 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 DKK1O94907 266 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 TTLL1O95922 423 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 TUBB4AP04350 444 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 CYP2D6P10635 497 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 PRPHP41219 470 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 PPP1R2P41236 205 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 MMP14P50281 582 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 TRAF1Q13077 416 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 ZNF827Q17R98 1081 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 C2CD5Q86YS7 1000 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 ZNF295-AS1Q8N0V1 137 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 CCDC47Q96A33 483 aaKnown RBP9.76□□□□□ -0.85
EPHA4-213ENST00000495693 AK8Q96MA6 479 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 ZDHHC15Q96MV8 337 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 GSDMAQ96QA5 445 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 TMEM47Q9BQJ4 181 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 CUEDC2Q9H467 287 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 TIMMDC1Q9NPL8 285 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 GJB4Q9NTQ9 266 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 SERPINA10Q9UK55 444 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 KIAA1024Q9UPX6 916 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 JAG2Q9Y219 1238 aa9.76□□□□□ -0.85
EPHA4-213ENST00000495693 COL2A1P02458 1487 aaPredicted RBP9.76□□□□□ -0.85
EPHA4-213ENST00000495693 SNED1Q8TER0 1413 aa9.75□□□□□ -0.85
EPHA4-213ENST00000495693 A0A1B0GTH6 734 aa9.75□□□□□ -0.85
EPHA4-213ENST00000495693 KIF2AO00139 706 aaPredicted RBP9.75□□□□□ -0.85
EPHA4-213ENST00000495693 SLFN14P0C7P3 912 aa9.75□□□□□ -0.85
EPHA4-213ENST00000495693 ERCC5P28715 1186 aaPredicted RBP9.75□□□□□ -0.85
EPHA4-213ENST00000495693 TOB1P50616 345 aaPredicted RBP9.75□□□□□ -0.85
EPHA4-213ENST00000495693 EPHA4P54764 986 aa9.75□□□□□ -0.85
EPHA4-213ENST00000495693 SF3B2Q13435 895 aaKnown RBP9.75□□□□□ -0.85
EPHA4-213ENST00000495693 C4orf17Q53FE4 359 aa9.75□□□□□ -0.85
EPHA4-213ENST00000495693 DNTTIP2Q5QJE6 756 aaKnown RBP9.75□□□□□ -0.85
EPHA4-213ENST00000495693 C11orf57Q6ZUT1 292 aaPredicted RBP9.75□□□□□ -0.85
EPHA4-213ENST00000495693 DHX40Q8IX18 779 aaKnown RBP9.75□□□□□ -0.85
EPHA4-213ENST00000495693 AOPEPQ8N6M6 819 aa9.75□□□□□ -0.85
EPHA4-213ENST00000495693 TNFRSF25Q93038 417 aa9.75□□□□□ -0.85
EPHA4-213ENST00000495693 ZNF622Q969S3 477 aaKnown RBP eCLIP9.75□□□□□ -0.85
EPHA4-213ENST00000495693 PRIMPOLQ96LW4 560 aa9.75□□□□□ -0.85
EPHA4-213ENST00000495693 RAB34Q9BZG1 259 aa9.75□□□□□ -0.85
EPHA4-213ENST00000495693 OSBPL5Q9H0X9 879 aaPredicted RBP9.75□□□□□ -0.85
EPHA4-213ENST00000495693 IL17RBQ9NRM6 502 aa9.75□□□□□ -0.85
EPHA4-213ENST00000495693 MAD2L2Q9UI95 211 aa9.75□□□□□ -0.85
EPHA4-213ENST00000495693 PCDHB6Q9Y5E3 794 aa9.75□□□□□ -0.85
EPHA4-213ENST00000495693 MYH1P12882 1939 aa9.75□□□□□ -0.85
EPHA4-213ENST00000495693 KLRF2D3W0D1 207 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 POLR2DO15514 142 aaKnown RBP9.74□□□□□ -0.85
EPHA4-213ENST00000495693 F11P03951 625 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 LMOD1P29536 600 aaPredicted RBP9.74□□□□□ -0.85
EPHA4-213ENST00000495693 GMPRP36959 345 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 KCNJ6P48051 423 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 PLCD1P51178 756 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 FOXK2Q01167 660 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 GABPAQ06546 454 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 NOLC1Q14978 699 aaKnown RBP eCLIP9.74□□□□□ -0.85
EPHA4-213ENST00000495693 RTKN2Q8IZC4 609 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 CMTR1Q8N1G2 835 aaKnown RBP9.74□□□□□ -0.85
EPHA4-213ENST00000495693 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.74□□□□□ -0.85
EPHA4-213ENST00000495693 CCDC112Q8NEF3 446 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 ANKRD20A12PQ8NF67 263 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 TPCN2Q8NHX9 752 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 DYNLL2Q96FJ2 89 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 NAP1L5Q96NT1 182 aaPredicted RBP9.74□□□□□ -0.85
EPHA4-213ENST00000495693 CTAGE1Q96RT6 745 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 IDI2Q9BXS1 227 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 ZMYND12Q9H0C1 365 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 SPTLC3Q9NUV7 552 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 USP40Q9NVE5 1235 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 TMOD2Q9NZR1 351 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 SCHIP1Q9P0W5 487 aaPredicted RBP9.74□□□□□ -0.85
EPHA4-213ENST00000495693 SAP30BPQ9UHR5 308 aaKnown RBP9.74□□□□□ -0.85
EPHA4-213ENST00000495693 SERTAD1Q9UHV2 236 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 CDK5RAP2Q96SN8 1893 aa9.74□□□□□ -0.85
EPHA4-213ENST00000495693 FAM196BA6NMK8 535 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 SLC26A4O43511 780 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 NMT2O60551 498 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 CRKP46108 304 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 NAPAP54920 295 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 NONOQ15233 471 aaKnown RBP eCLIP9.73□□□□□ -0.85
EPHA4-213ENST00000495693 SLC15A2Q16348 729 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 DPCR1Q3MIW9 517 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 LONRF3Q496Y0 759 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 DTHD1Q6ZMT9 781 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms