RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 CCSER1Q9C0I3 900 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 LRRC27Q9C0I9 530 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 MAF1Q9H063 256 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 DNAJC25Q9H1X3 360 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 RPAP3Q9H6T3 665 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-214ENST00000495485 CBX8Q9HC52 389 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-214ENST00000495485 TUBE1Q9UJT0 475 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 FLOT1O75955 427 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 DSG3P32926 999 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 CLK2P49760 499 aaKnown RBP11.57□□□□□ -0.56
HDAC3-214ENST00000495485 AMPD3Q01432 767 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 PDIA5Q14554 519 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 DHX8Q14562 1220 aaKnown RBP11.57□□□□□ -0.56
HDAC3-214ENST00000495485 ZYXQ15942 572 aaKnown RBP11.57□□□□□ -0.56
HDAC3-214ENST00000495485 CALCRLQ16602 461 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 LONRF3Q496Y0 759 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 C4orf32Q8N8J7 132 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 MLKLQ8NB16 471 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 CALML4Q96GE6 196 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 PDLIM2Q96JY6 352 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 GSDMAQ96QA5 445 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 RMND1Q9NWS8 449 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 SERTAD1Q9UHV2 236 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 PPP1R9AQ9ULJ8 1098 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 PRR12Q9ULL5 1215 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 ADAMTS5Q9UNA0 930 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 A0A0G2JMZ2 1700 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 ABCB11O95342 1321 aa11.57□□□□□ -0.56
HDAC3-214ENST00000495485 ATP2A1O14983 1001 aa11.56□□□□□ -0.56
HDAC3-214ENST00000495485 TBC1D8O95759 1140 aa11.56□□□□□ -0.56
HDAC3-214ENST00000495485 MAPK4P31152 587 aa11.56□□□□□ -0.56
HDAC3-214ENST00000495485 SPECC1Q5M775 1068 aa11.56□□□□□ -0.56
HDAC3-214ENST00000495485 FAM83BQ5T0W9 1011 aa11.56□□□□□ -0.56
HDAC3-214ENST00000495485 RRAGBQ5VZM2 374 aa11.56□□□□□ -0.56
HDAC3-214ENST00000495485 RASGRP2Q7LDG7 609 aa11.56□□□□□ -0.56
HDAC3-214ENST00000495485 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.56□□□□□ -0.56
HDAC3-214ENST00000495485 MCF2L2Q86YR7 1114 aa11.56□□□□□ -0.56
HDAC3-214ENST00000495485 SLFN12Q8IYM2 578 aa11.56□□□□□ -0.56
HDAC3-214ENST00000495485 PDILTQ8N807 584 aa11.56□□□□□ -0.56
HDAC3-214ENST00000495485 SHCBP1Q8NEM2 672 aa11.56□□□□□ -0.56
HDAC3-214ENST00000495485 GPRC5AQ8NFJ5 357 aa11.56□□□□□ -0.56
HDAC3-214ENST00000495485 DHX58Q96C10 678 aa11.56□□□□□ -0.56
HDAC3-214ENST00000495485 SLF1Q9BQI6 1058 aa11.56□□□□□ -0.56
HDAC3-214ENST00000495485 MAP3K20Q9NYL2 800 aaKnown RBP11.56□□□□□ -0.56
HDAC3-214ENST00000495485 COL11A1P12107 1806 aaPredicted RBP11.56□□□□□ -0.56
HDAC3-214ENST00000495485 ZNFX1Q9P2E3 1918 aaKnown RBP11.55□□□□□ -0.56
HDAC3-214ENST00000495485 SPDYE16A6NNV3 312 aaPredicted RBP11.55□□□□□ -0.56
HDAC3-214ENST00000495485 PIK3CDO00329 1044 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 IKBKBO14920 756 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 TBX3O15119 743 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 ZBED4O75132 1171 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 ADCY5O95622 1261 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 SLC25A27O95847 323 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 CYP2C8P10632 490 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 STAT6P42226 847 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 FXR2P51116 673 aaKnown RBP eCLIP11.55□□□□□ -0.56
HDAC3-214ENST00000495485 LBX1P52954 281 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 FCGRTP55899 365 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 LACTBP83111 547 aaPredicted RBP11.55□□□□□ -0.56
HDAC3-214ENST00000495485 NT5DC1Q5TFE4 455 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 SPICE1Q8N0Z3 855 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 ZNF296Q8WUU4 475 aaPredicted RBP11.55□□□□□ -0.56
HDAC3-214ENST00000495485 KIFC2Q96AC6 838 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 EPSTI1Q96J88 318 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 CDK5RAP3Q96JB5 506 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 P2RX7Q99572 595 aaKnown RBP11.55□□□□□ -0.56
HDAC3-214ENST00000495485 ANO3Q9BYT9 981 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 RANBP17Q9H2T7 1088 aaKnown RBP11.55□□□□□ -0.56
HDAC3-214ENST00000495485 DISC1Q9NRI5 854 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 PCDHA5Q9Y5H7 936 aa11.55□□□□□ -0.56
HDAC3-214ENST00000495485 GCOM1H8Y6P7 765 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-214ENST00000495485 ACTN4O43707 911 aaKnown RBP11.54□□□□□ -0.56
HDAC3-214ENST00000495485 STRNO43815 780 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 GTPBP6O43824 516 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-214ENST00000495485 PPP1R11O60927 126 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-214ENST00000495485 POLR2MP0CAP2 368 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 PPP1R2P41236 205 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 ERVK-9P63128 1117 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 ERVK-24P63145 666 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 MDM2Q00987 491 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-214ENST00000495485 GRIN1Q05586 938 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 PNOCQ13519 176 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 TKFCQ3LXA3 575 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 USH1GQ495M9 461 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 KRT79Q5XKE5 535 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.54□□□□□ -0.56
HDAC3-214ENST00000495485 CTU1Q7Z7A3 348 aaKnown RBP11.54□□□□□ -0.56
HDAC3-214ENST00000495485 CABP7Q86V35 215 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 LUZP1Q86V48 1076 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 NUP88Q99567 741 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-214ENST00000495485 TRIM5Q9C035 493 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 NT5C3AQ9H0P0 336 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 MROH8Q9H579 483 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 TMEM260Q9NX78 707 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 STK17AQ9UEE5 414 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 LRWD1Q9UFC0 647 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 FBXO40Q9UH90 709 aa11.54□□□□□ -0.56
HDAC3-214ENST00000495485 DDX25Q9UHL0 483 aaKnown RBP11.54□□□□□ -0.56
HDAC3-214ENST00000495485 KIAA0100Q14667 2235 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms