RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 ERVK-24P63145 666 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 ARHGAP4P98171 946 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 CYP4A11Q02928 519 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 SF3B2Q13435 895 aaKnown RBP11.64□□□□□ -0.55
SAMM50-206ENST00000494795 FBXO11Q86XK2 927 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 RTKN2Q8IZC4 609 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 CRYGNQ8WXF5 182 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 CHP1Q99653 195 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 DNAI1Q9UI46 699 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 ZNRF3Q9ULT6 936 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 MARCH6O60337 910 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 CFBP00751 764 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 UBXN1Q04323 297 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 PPP4R3AQ6IN85 833 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 ACRBPQ8NEB7 543 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 FAM151AQ8WW52 585 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 CCDC34Q96HJ3 373 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 AK8Q96MA6 479 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 C7orf25Q9BPX7 421 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 LIMA1Q9UHB6 759 aaKnown RBP11.64□□□□□ -0.55
SAMM50-206ENST00000494795 PSDA5PKW4 1024 aaPredicted RBP11.64□□□□□ -0.55
SAMM50-206ENST00000494795 TBC1D10BQ4KMP7 808 aaPredicted RBP11.64□□□□□ -0.55
SAMM50-206ENST00000494795 NIM1KQ8IY84 436 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 GMCL1P1Q8NEA9 526 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 SUPT20HQ8NEM7 779 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 RAD54LQ92698 747 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 CALML4Q96GE6 196 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 PURBQ96QR8 312 aaKnown RBP11.64□□□□□ -0.55
SAMM50-206ENST00000494795 AMNQ9BXJ7 453 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 EXOC1Q9NV70 894 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 BCS1LQ9Y276 419 aa11.64□□□□□ -0.55
SAMM50-206ENST00000494795 EML1O00423 815 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 DYNC1I1O14576 645 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 INPP5BP32019 993 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 GTF2F1P35269 517 aaKnown RBP eCLIP11.63□□□□□ -0.55
SAMM50-206ENST00000494795 APBA1Q02410 837 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 SPIRE1Q08AE8 756 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 NCBP1Q09161 790 aaKnown RBP11.63□□□□□ -0.55
SAMM50-206ENST00000494795 R3HDM1Q15032 1099 aaKnown RBP11.63□□□□□ -0.55
SAMM50-206ENST00000494795 CSGALNACT2Q8N6G5 542 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 GMCL1Q96IK5 515 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 KCNMB3Q9NPA1 279 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 LZTFL1Q9NQ48 299 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 AGPAT5Q9NUQ2 364 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 RGL1Q9NZL6 768 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 LRRC10BA6NIK2 292 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 AKR1B15C9JRZ8 316 aaPredicted RBP11.63□□□□□ -0.55
SAMM50-206ENST00000494795 hCG_1984214I3L0E3 225 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 EPHB6O15197 1021 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 RASA3Q14644 834 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 KCNB1Q14721 858 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 SV2BQ7L1I2 683 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 ZNF713Q8N859 430 aaPredicted RBP11.63□□□□□ -0.55
SAMM50-206ENST00000494795 ETNPPLQ8TBG4 499 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 DNAJC19Q96DA6 116 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 AGBL1Q96MI9 1066 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 EPC1Q9H2F5 836 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 RGPD3A6NKT7 1758 aaPredicted RBP11.63□□□□□ -0.55
SAMM50-206ENST00000494795 RGPD4Q7Z3J3 1758 aa11.63□□□□□ -0.55
SAMM50-206ENST00000494795 MFAP3LO75121 409 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 TMEM119Q4V9L6 283 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 WNK4Q96J92 1243 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 CDK5RAP3Q96JB5 506 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 WDR18Q9BV38 432 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 MYOZ2Q9NPC6 264 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 RMND1Q9NWS8 449 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 PIM2Q9P1W9 311 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 TRIM10Q9UDY6 481 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 TTC26A0AVF1 554 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 CASP5P51878 434 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 ARSHQ5FYA8 562 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 KRT79Q5XKE5 535 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 NCAPH2Q6IBW4 605 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 CATSPER3Q86XQ3 398 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 NELFCDQ8IXH7 590 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 CCDC112Q8NEF3 446 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 NLGN2Q8NFZ4 835 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 P2RX5Q93086 422 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 TMOD2Q9NZR1 351 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 PKD2L1Q9P0L9 805 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 TMX2Q9Y320 296 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 GJA3Q9Y6H8 435 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 MSH4O15457 936 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 CHMP2AO43633 222 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 STAT2P52630 851 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 MIIPQ5JXC2 388 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 ZNF507Q8TCN5 953 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 KCNV2Q8TDN2 545 aa11.62□□□□□ -0.55
SAMM50-206ENST00000494795 SFI1A8K8P3 1242 aa11.61□□□□□ -0.55
SAMM50-206ENST00000494795 RSPH10B2B2RC85 870 aa11.61□□□□□ -0.55
SAMM50-206ENST00000494795 CTIFO43310 598 aaKnown RBP11.61□□□□□ -0.55
SAMM50-206ENST00000494795 RSPH10BP0C881 870 aa11.61□□□□□ -0.55
SAMM50-206ENST00000494795 SPATA31C1P0DKV0 1188 aa11.61□□□□□ -0.55
SAMM50-206ENST00000494795 CAP2P40123 477 aa11.61□□□□□ -0.55
SAMM50-206ENST00000494795 PABPC4Q13310 644 aaKnown RBP eCLIP11.61□□□□□ -0.553e-13■□□□□ 9.3
SAMM50-206ENST00000494795 TMEM266Q2M3C6 531 aa11.61□□□□□ -0.55
SAMM50-206ENST00000494795 PPP1R18Q6NYC8 613 aa11.61□□□□□ -0.55
SAMM50-206ENST00000494795 TRMT1LQ7Z2T5 733 aaKnown RBP11.61□□□□□ -0.55
SAMM50-206ENST00000494795 CNOT6LQ96LI5 555 aaKnown RBP11.61□□□□□ -0.55
SAMM50-206ENST00000494795 HOMER2Q9NSB8 354 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms