RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 UIMC1Q96RL1 719 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 KCND1Q9NSA2 647 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 LIMA1Q9UHB6 759 aaKnown RBP11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 PTPRFP10586 1907 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 OTOFQ9HC10 1997 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 LRRC10BA6NIK2 292 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 USP27XA6NNY8 438 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 WDR46O15213 610 aaKnown RBP11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 TEX33O43247 280 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 SLC26A4O43511 780 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 SFPQP23246 707 aaKnown RBP eCLIP11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 STAT3P40763 770 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 EHHADHQ08426 723 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 STK4Q13043 487 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 DGKZQ13574 1117 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 PRR16Q569H4 304 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 TTI2Q6NXR4 508 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 SV2BQ7L1I2 683 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 LDHDQ86WU2 507 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 SLFN12Q8IYM2 578 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 KIAA0895Q8NCT3 520 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 TMX1Q9H3N1 280 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 ZNF112Q9UJU3 913 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 VAV3Q9UKW4 847 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 MSH4O15457 936 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 FCER1AP12319 257 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 KCNJ6P48051 423 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 AMPD3Q01432 767 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 PDE4DQ08499 809 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 DHX8Q14562 1220 aaKnown RBP11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 KRT31Q15323 416 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 SPECC1LQ69YQ0 1117 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 TMEM139Q8IV31 216 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 CYP2W1Q8TAV3 490 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 LPAR1Q92633 364 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 HPS3Q969F9 1004 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 DNAJC19Q96DA6 116 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 CDK5RAP3Q96JB5 506 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 FEZ1Q99689 392 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 DUSP9Q99956 384 aaKnown RBP11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 EXOC1Q9NV70 894 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 GPRC5DQ9NZD1 345 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 ABCB11O95342 1321 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 KDM3AQ9Y4C1 1321 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 LOC285556D6RIA3 1793 aa11.9□□□□□ -0.5
PRPF4B-209ENST00000494674 PVALEFA0A1B0GWK0 134 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 POTEB3A0JP26 581 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 POTECB2RU33 542 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 GCOM1H8Y6P7 765 aaPredicted RBP11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 MED24O75448 989 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 ICAM1P05362 532 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 POLR2MP0CAP2 368 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 CCT6AP40227 531 aaKnown RBP11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 GHRHRQ02643 423 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 GOLGA8FQ08AF8 430 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 GOLGA8DPQ0D2H9 430 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 ANGEL2Q5VTE6 544 aaKnown RBP11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 POTEBQ6S5H4 581 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 UNC13DQ70J99 1090 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 FCHSD1Q86WN1 690 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 DHTKD1Q96HY7 919 aaPredicted RBP11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 FAM20AQ96MK3 541 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 WDR18Q9BV38 432 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 MRPL11Q9Y3B7 192 aaKnown RBP11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 LOXHD1Q8IVV2 1947 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 H7C1D1 291 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 PSMA7O14818 248 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 MARCH6O60337 910 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 CFBP00751 764 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 SPATA31C1P0DKV0 1188 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 HSD17B4P51659 736 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 HIRAP54198 1017 aaPredicted RBP11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 TERF1P54274 439 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 TCP11X2Q5H9J9 407 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 E4F1Q66K89 784 aaPredicted RBP11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 APOBEC3FQ8IUX4 373 aaKnown RBP11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 GPC2Q8N158 579 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 TC2NQ8N9U0 490 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 CLEC4DQ8WXI8 215 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 AGBL1Q96MI9 1066 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 CTAGE1Q96RT6 745 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 SLF1Q9BQI6 1058 aa11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 R3HCC1Q9Y3T6 440 aaKnown RBP11.89□□□□□ -0.51
PRPF4B-209ENST00000494674 KCNJ18B7U540 433 aa11.88□□□□□ -0.51
PRPF4B-209ENST00000494674 E9PMD0 336 aa11.88□□□□□ -0.51
PRPF4B-209ENST00000494674 VCAM1P19320 739 aa11.88□□□□□ -0.51
PRPF4B-209ENST00000494674 LMNB1P20700 586 aa11.88□□□□□ -0.51
PRPF4B-209ENST00000494674 CCNE1P24864 410 aa11.88□□□□□ -0.51
PRPF4B-209ENST00000494674 COPB1P53618 953 aaKnown RBP11.88□□□□□ -0.51
PRPF4B-209ENST00000494674 SPAG1Q07617 926 aa11.88□□□□□ -0.51
PRPF4B-209ENST00000494674 MTMR2Q13614 643 aa11.88□□□□□ -0.51
PRPF4B-209ENST00000494674 KCNJ12Q14500 433 aa11.88□□□□□ -0.51
PRPF4B-209ENST00000494674 DYMQ7RTS9 669 aa11.88□□□□□ -0.51
PRPF4B-209ENST00000494674 SCYL3Q8IZE3 742 aa11.88□□□□□ -0.51
PRPF4B-209ENST00000494674 CCAR2Q8N163 923 aaKnown RBP11.88□□□□□ -0.51
PRPF4B-209ENST00000494674 PRPF38AQ8NAV1 312 aaKnown RBP11.88□□□□□ -0.51
PRPF4B-209ENST00000494674 DDX12PQ92771 950 aa11.88□□□□□ -0.51
PRPF4B-209ENST00000494674 P2RX5Q93086 422 aa11.88□□□□□ -0.51
PRPF4B-209ENST00000494674 CCDC47Q96A33 483 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms