RNA–Protein interactions for RNA: ENST00000494511.5

PMP22-206, Transcript of peripheral myelin protein 22, humanhuman

TSL 1 (best) BASIC

Gene PMP22, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-206ENST00000494511 SLC43A3Q8NBI5 491 aa16.68■□□□□ 0.26
PMP22-206ENST00000494511 PDCD2LQ9BRP1 358 aa16.68■□□□□ 0.26
PMP22-206ENST00000494511 TRPV6Q9H1D0 765 aa16.68■□□□□ 0.26
PMP22-206ENST00000494511 MAP3K20Q9NYL2 800 aaKnown RBP16.68■□□□□ 0.26
PMP22-206ENST00000494511 EYSQ5T1H1 3165 aa16.67■□□□□ 0.26
PMP22-206ENST00000494511 SORBS3O60504 671 aa16.67■□□□□ 0.26
PMP22-206ENST00000494511 GH1P01241 217 aa16.67■□□□□ 0.26
PMP22-206ENST00000494511 CD4P01730 458 aa16.67■□□□□ 0.26
PMP22-206ENST00000494511 FPGSQ05932 587 aa16.67■□□□□ 0.26
PMP22-206ENST00000494511 KRT32Q14532 448 aa16.67■□□□□ 0.26
PMP22-206ENST00000494511 PGM5Q15124 567 aa16.67■□□□□ 0.26
PMP22-206ENST00000494511 TSGA10IPQ3SY00 556 aa16.67■□□□□ 0.26
PMP22-206ENST00000494511 SGMS1Q86VZ5 419 aa16.67■□□□□ 0.26
PMP22-206ENST00000494511 AFG1LQ8WV93 481 aa16.67■□□□□ 0.26
PMP22-206ENST00000494511 MTG1Q9BT17 334 aaPredicted RBP16.67■□□□□ 0.26
PMP22-206ENST00000494511 BRPF3Q9ULD4 1205 aa16.67■□□□□ 0.26
PMP22-206ENST00000494511 MRVI1Q9Y6F6 885 aa16.67■□□□□ 0.26
PMP22-206ENST00000494511 A6NJR5 290 aa16.66■□□□□ 0.26
PMP22-206ENST00000494511 SMARCA1P28370 1054 aa16.66■□□□□ 0.26
PMP22-206ENST00000494511 ARHGAP1Q07960 439 aa16.66■□□□□ 0.26
PMP22-206ENST00000494511 FAM47CQ5HY64 1035 aa16.66■□□□□ 0.26
PMP22-206ENST00000494511 APOA5Q6Q788 366 aa16.66■□□□□ 0.26
PMP22-206ENST00000494511 TMTC3Q6ZXV5 915 aa16.66■□□□□ 0.26
PMP22-206ENST00000494511 SAMD3Q8N6K7 520 aa16.66■□□□□ 0.26
PMP22-206ENST00000494511 JAKMIP1Q96N16 626 aaKnown RBP16.66■□□□□ 0.26
PMP22-206ENST00000494511 PPP4R2Q9NY27 417 aa16.66■□□□□ 0.26
PMP22-206ENST00000494511 DDX41Q9UJV9 622 aaKnown RBP16.66■□□□□ 0.26
PMP22-206ENST00000494511 NAP1L2Q9ULW6 460 aaPredicted RBP16.66■□□□□ 0.26
PMP22-206ENST00000494511 SCN10AQ9Y5Y9 1956 aa16.66■□□□□ 0.26
PMP22-206ENST00000494511 B4GALT4O60513 344 aa16.65■□□□□ 0.26
PMP22-206ENST00000494511 RGS20O76081 388 aa16.65■□□□□ 0.26
PMP22-206ENST00000494511 CCND2P30279 289 aa16.65■□□□□ 0.26
PMP22-206ENST00000494511 CYP2C18P33260 490 aa16.65■□□□□ 0.26
PMP22-206ENST00000494511 FGD1P98174 961 aa16.65■□□□□ 0.26
PMP22-206ENST00000494511 NBPF20Q3BBV1 942 aa16.65■□□□□ 0.26
PMP22-206ENST00000494511 MFSD5Q6N075 450 aa16.65■□□□□ 0.26
PMP22-206ENST00000494511 USP17L6PQ6QN14 398 aa16.65■□□□□ 0.26
PMP22-206ENST00000494511 VSIG10LQ86VR7 867 aa16.65■□□□□ 0.26
PMP22-206ENST00000494511 ALDH8A1Q9H2A2 487 aaPredicted RBP16.65■□□□□ 0.26
PMP22-206ENST00000494511 TRMT13Q9NUP7 481 aaKnown RBP16.65■□□□□ 0.26
PMP22-206ENST00000494511 SNX14Q9Y5W7 946 aa16.65■□□□□ 0.26
PMP22-206ENST00000494511 KLF18A0A0U1RQI7 1052 aa16.64■□□□□ 0.25
PMP22-206ENST00000494511 ZBTB43O43298 467 aa16.64■□□□□ 0.25
PMP22-206ENST00000494511 MMP3P08254 477 aa16.64■□□□□ 0.25
PMP22-206ENST00000494511 HSPA4P34932 840 aa16.64■□□□□ 0.25
PMP22-206ENST00000494511 RTN1Q16799 776 aa16.64■□□□□ 0.25
PMP22-206ENST00000494511 DHX37Q8IY37 1157 aaKnown RBP16.64■□□□□ 0.25
PMP22-206ENST00000494511 SMARCC2Q8TAQ2 1214 aa16.64■□□□□ 0.25
PMP22-206ENST00000494511 GPKOWQ92917 476 aaPredicted RBP eCLIP16.64■□□□□ 0.25
PMP22-206ENST00000494511 CUL5Q93034 780 aa16.64■□□□□ 0.25
PMP22-206ENST00000494511 HIPK3Q9H422 1215 aa16.64■□□□□ 0.25
PMP22-206ENST00000494511 UMODL1Q5DID0 1318 aa16.64■□□□□ 0.25
PMP22-206ENST00000494511 GOLGA8AA7E2F4 631 aa16.63■□□□□ 0.25
PMP22-206ENST00000494511 GOLGA8BA8MQT2 603 aa16.63■□□□□ 0.25
PMP22-206ENST00000494511 KPNA6O60684 536 aa16.63■□□□□ 0.25
PMP22-206ENST00000494511 REC8O95072 547 aa16.63■□□□□ 0.25
PMP22-206ENST00000494511 HMGB1P09429 215 aaKnown RBP16.63■□□□□ 0.25
PMP22-206ENST00000494511 CYP2C9P11712 490 aa16.63■□□□□ 0.25
PMP22-206ENST00000494511 CSF2RAP15509 400 aa16.63■□□□□ 0.25
PMP22-206ENST00000494511 CCL23P55773 120 aa16.63■□□□□ 0.25
PMP22-206ENST00000494511 FAM109BQ6ICB4 259 aaPredicted RBP16.63■□□□□ 0.25
PMP22-206ENST00000494511 HEATR3Q7Z4Q2 680 aa16.63■□□□□ 0.25
PMP22-206ENST00000494511 KCNB2Q92953 911 aa16.63■□□□□ 0.25
PMP22-206ENST00000494511 RNPC3Q96LT9 517 aaKnown RBP16.63■□□□□ 0.25
PMP22-206ENST00000494511 SEZ6LQ9BYH1 1024 aa16.63■□□□□ 0.25
PMP22-206ENST00000494511 RTEL1Q9NZ71 1219 aa16.63■□□□□ 0.25
PMP22-206ENST00000494511 MEIS2O14770 477 aa16.62■□□□□ 0.25
PMP22-206ENST00000494511 ACRP10323 421 aa16.62■□□□□ 0.25
PMP22-206ENST00000494511 MRPS9P82933 396 aaKnown RBP16.62■□□□□ 0.25
PMP22-206ENST00000494511 SP2Q02086 613 aa16.62■□□□□ 0.25
PMP22-206ENST00000494511 APOBRQ0VD83 1088 aa16.62■□□□□ 0.25
PMP22-206ENST00000494511 PPIGQ13427 754 aaKnown RBP eCLIP16.62■□□□□ 0.25
PMP22-206ENST00000494511 UBE2SQ16763 222 aa16.62■□□□□ 0.25
PMP22-206ENST00000494511 BLOC1S2Q6QNY1 142 aa16.62■□□□□ 0.25
PMP22-206ENST00000494511 Q6ZUG5 572 aa16.62■□□□□ 0.25
PMP22-206ENST00000494511 TMEM199Q8N511 208 aa16.62■□□□□ 0.25
PMP22-206ENST00000494511 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.62■□□□□ 0.25
PMP22-206ENST00000494511 NOC4LQ9BVI4 516 aaKnown RBP16.62■□□□□ 0.25
PMP22-206ENST00000494511 COL25A1Q9BXS0 654 aaPredicted RBP16.62■□□□□ 0.25
PMP22-206ENST00000494511 PSTPIP2Q9H939 334 aa16.62■□□□□ 0.25
PMP22-206ENST00000494511 RBM28Q9NW13 759 aaKnown RBP16.62■□□□□ 0.25
PMP22-206ENST00000494511 CNTNAP5Q8WYK1 1306 aa16.62■□□□□ 0.25
PMP22-206ENST00000494511 DOCK5Q9H7D0 1870 aa16.61■□□□□ 0.25
PMP22-206ENST00000494511 GGPS1O95749 300 aa16.61■□□□□ 0.25
PMP22-206ENST00000494511 CASTP20810 708 aaKnown RBP16.61■□□□□ 0.25
PMP22-206ENST00000494511 UBA1P22314 1058 aaKnown RBP16.61■□□□□ 0.25
PMP22-206ENST00000494511 LAMC2Q13753 1193 aa16.61■□□□□ 0.25
PMP22-206ENST00000494511 DGKDQ16760 1214 aa16.61■□□□□ 0.25
PMP22-206ENST00000494511 C16orf59Q7L2K0 433 aa16.61■□□□□ 0.25
PMP22-206ENST00000494511 BRF1Q92994 677 aa16.61■□□□□ 0.25
PMP22-206ENST00000494511 GUCD1Q96NT3 240 aa16.61■□□□□ 0.25
PMP22-206ENST00000494511 BCAS3Q9H6U6 928 aa16.61■□□□□ 0.25
PMP22-206ENST00000494511 CUL9Q8IWT3 2517 aa16.6■□□□□ 0.25
PMP22-206ENST00000494511 PIK3CDO00329 1044 aa16.6■□□□□ 0.25
PMP22-206ENST00000494511 CENPBP07199 599 aaPredicted RBP16.6■□□□□ 0.25
PMP22-206ENST00000494511 ZNF286BP0CG31 522 aa16.6■□□□□ 0.25
PMP22-206ENST00000494511 CDC27P30260 824 aa16.6■□□□□ 0.25
PMP22-206ENST00000494511 CELF3Q5SZQ8 465 aaKnown RBP16.6■□□□□ 0.25
PMP22-206ENST00000494511 MYSM1Q5VVJ2 828 aa16.6■□□□□ 0.25
PMP22-206ENST00000494511 WWC2Q6AWC2 1192 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms