RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 CDK5RAP3Q96JB5 506 aa18.55■□□□□ 0.56
ATG4B-225ENST00000494465 SLF1Q9BQI6 1058 aa18.55■□□□□ 0.56
ATG4B-225ENST00000494465 FZD1Q9UP38 647 aa18.55■□□□□ 0.56
ATG4B-225ENST00000494465 MAPK8IP1Q9UQF2 711 aa18.55■□□□□ 0.56
ATG4B-225ENST00000494465 SRCAPQ6ZRS2 3230 aa18.54■□□□□ 0.56
ATG4B-225ENST00000494465 MYMKA6NI61 221 aa18.54■□□□□ 0.56
ATG4B-225ENST00000494465 ICAM1P05362 532 aa18.54■□□□□ 0.56
ATG4B-225ENST00000494465 CDK11BP21127 795 aaKnown RBP18.54■□□□□ 0.56
ATG4B-225ENST00000494465 CCZ1BP86790 482 aa18.54■□□□□ 0.56
ATG4B-225ENST00000494465 CCZ1P86791 482 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-225ENST00000494465 ARMCX5Q6P1M9 558 aa18.54■□□□□ 0.56
ATG4B-225ENST00000494465 ZKSCAN4Q969J2 545 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-225ENST00000494465 AGBL1Q96MI9 1066 aa18.54■□□□□ 0.56
ATG4B-225ENST00000494465 IGLV3-22A0A075B6J6 115 aa18.54■□□□□ 0.56
ATG4B-225ENST00000494465 VCAM1P19320 739 aa18.54■□□□□ 0.56
ATG4B-225ENST00000494465 DHX8Q14562 1220 aaKnown RBP18.54■□□□□ 0.56
ATG4B-225ENST00000494465 WDR18Q9BV38 432 aa18.54■□□□□ 0.56
ATG4B-225ENST00000494465 RLFQ13129 1914 aa18.54■□□□□ 0.56
ATG4B-225ENST00000494465 STAT3P40763 770 aa18.53■□□□□ 0.56
ATG4B-225ENST00000494465 ASIC1P78348 528 aa18.53■□□□□ 0.56
ATG4B-225ENST00000494465 PTPN21Q16825 1174 aa18.53■□□□□ 0.56
ATG4B-225ENST00000494465 CNNM4Q6P4Q7 775 aa18.53■□□□□ 0.56
ATG4B-225ENST00000494465 WRNIP1Q96S55 665 aa18.53■□□□□ 0.56
ATG4B-225ENST00000494465 A0A1B0GTH6 734 aa18.53■□□□□ 0.56
ATG4B-225ENST00000494465 MSH4O15457 936 aa18.53■□□□□ 0.56
ATG4B-225ENST00000494465 PTPRAP18433 802 aa18.53■□□□□ 0.56
ATG4B-225ENST00000494465 SPP2Q13103 211 aa18.53■□□□□ 0.56
ATG4B-225ENST00000494465 NR1I3Q14994 352 aa18.53■□□□□ 0.56
ATG4B-225ENST00000494465 HOOK2Q96ED9 719 aa18.53■□□□□ 0.56
ATG4B-225ENST00000494465 FAM20AQ96MK3 541 aa18.53■□□□□ 0.56
ATG4B-225ENST00000494465 CCT6AP40227 531 aaKnown RBP18.52■□□□□ 0.56
ATG4B-225ENST00000494465 STK4Q13043 487 aa18.52■□□□□ 0.56
ATG4B-225ENST00000494465 SLC38A10Q9HBR0 1119 aa18.52■□□□□ 0.56
ATG4B-225ENST00000494465 CCPG1Q9ULG6 757 aa18.52■□□□□ 0.56
ATG4B-225ENST00000494465 KDM3AQ9Y4C1 1321 aa18.52■□□□□ 0.56
ATG4B-225ENST00000494465 SLC26A4O43511 780 aa18.52■□□□□ 0.55
ATG4B-225ENST00000494465 HSD17B4P51659 736 aa18.52■□□□□ 0.55
ATG4B-225ENST00000494465 PMS1P54277 932 aaKnown RBP18.52■□□□□ 0.55
ATG4B-225ENST00000494465 BACE1P56817 501 aa18.52■□□□□ 0.55
ATG4B-225ENST00000494465 PDE4DQ08499 809 aa18.52■□□□□ 0.55
ATG4B-225ENST00000494465 CLEC4DQ8WXI8 215 aa18.52■□□□□ 0.55
ATG4B-225ENST00000494465 EXOC1Q9NV70 894 aa18.52■□□□□ 0.55
ATG4B-225ENST00000494465 VAV3Q9UKW4 847 aa18.52■□□□□ 0.55
ATG4B-225ENST00000494465 PPP2R3BQ9Y5P8 575 aa18.52■□□□□ 0.55
ATG4B-225ENST00000494465 RBBP6Q7Z6E9 1792 aaKnown RBP18.51■□□□□ 0.55
ATG4B-225ENST00000494465 DDNO94850 711 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-225ENST00000494465 FCER1AP12319 257 aa18.51■□□□□ 0.55
ATG4B-225ENST00000494465 KLRG1Q96E93 195 aa18.51■□□□□ 0.55
ATG4B-225ENST00000494465 TANGO6Q9C0B7 1094 aa18.51■□□□□ 0.55
ATG4B-225ENST00000494465 NT5C3AQ9H0P0 336 aa18.51■□□□□ 0.55
ATG4B-225ENST00000494465 PPP1R9AQ9ULJ8 1098 aa18.51■□□□□ 0.55
ATG4B-225ENST00000494465 POTEB3A0JP26 581 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 TRIM49BA6NDI0 452 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 POTECB2RU33 542 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 MED24O75448 989 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 USP14P54578 494 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 POTEBQ6S5H4 581 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 KIAA0895Q8NCT3 520 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 CCDC150Q8NCX0 1101 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 RPAP3Q9H6T3 665 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-225ENST00000494465 ADD3Q9UEY8 706 aaKnown RBP18.5■□□□□ 0.55
ATG4B-225ENST00000494465 PVALEFA0A1B0GWK0 134 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 FLOT1O75955 427 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 SKILP12757 684 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 GHRHRQ02643 423 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 TBX2Q13207 712 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-225ENST00000494465 COBLL1Q53SF7 1204 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 UNC13DQ70J99 1090 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 ZNF280CQ8ND82 737 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 HPS3Q969F9 1004 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 KIAA1024Q9UPX6 916 aa18.5■□□□□ 0.55
ATG4B-225ENST00000494465 COL11A1P12107 1806 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-225ENST00000494465 LRRC10BA6NIK2 292 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 NFIBO00712 420 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 ZNF76P36508 570 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 EHHADHQ08426 723 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 TTI2Q6NXR4 508 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 DYMQ7RTS9 669 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 IRF2BP1Q8IU81 584 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 DDX12PQ92771 950 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 CCDC47Q96A33 483 aaKnown RBP18.49■□□□□ 0.55
ATG4B-225ENST00000494465 SYT17Q9BSW7 474 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 PICK1Q9NRD5 415 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 COL20A1Q9P218 1284 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 LIMA1Q9UHB6 759 aaKnown RBP18.49■□□□□ 0.55
ATG4B-225ENST00000494465 TEX33O43247 280 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 SPATA31C1P0DKV0 1188 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 YBX3P16989 372 aaKnown RBP eCLIP18.49■□□□□ 0.55
ATG4B-225ENST00000494465 UBXN2AP68543 259 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 TPD52L1Q16890 204 aaPredicted RBP18.49■□□□□ 0.55
ATG4B-225ENST00000494465 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.49■□□□□ 0.55
ATG4B-225ENST00000494465 DNAJC19Q96DA6 116 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 DHTKD1Q96HY7 919 aaPredicted RBP18.49■□□□□ 0.55
ATG4B-225ENST00000494465 RAVER2Q9HCJ3 691 aaKnown RBP18.49■□□□□ 0.55
ATG4B-225ENST00000494465 PITPNM2Q9BZ72 1349 aa18.49■□□□□ 0.55
ATG4B-225ENST00000494465 E9PMD0 336 aa18.48■□□□□ 0.55
ATG4B-225ENST00000494465 PSMA7O14818 248 aa18.48■□□□□ 0.55
ATG4B-225ENST00000494465 STIM1Q13586 685 aa18.48■□□□□ 0.55
ATG4B-225ENST00000494465 CATSPER3Q86XQ3 398 aa18.48■□□□□ 0.55
ATG4B-225ENST00000494465 CPXCR1Q8N123 301 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms