RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 ADCY7P51828 1080 aa26.92■■□□□ 1.9
CLIC3-203ENST00000494426 MRPS9P82933 396 aaKnown RBP26.92■■□□□ 1.9
CLIC3-203ENST00000494426 TLK2Q86UE8 772 aa26.92■■□□□ 1.9
CLIC3-203ENST00000494426 COPS5Q92905 334 aa26.92■■□□□ 1.9
CLIC3-203ENST00000494426 UPF2Q9HAU5 1272 aaKnown RBP26.92■■□□□ 1.9
CLIC3-203ENST00000494426 PHF24Q9UPV7 400 aa26.92■■□□□ 1.9
CLIC3-203ENST00000494426 CCND2P30279 289 aa26.91■■□□□ 1.9
CLIC3-203ENST00000494426 CPLX2Q6PUV4 134 aaKnown RBP26.91■■□□□ 1.9
CLIC3-203ENST00000494426 TRIM22Q8IYM9 498 aa26.91■■□□□ 1.9
CLIC3-203ENST00000494426 TBC1D32Q96NH3 1257 aa26.91■■□□□ 1.9
CLIC3-203ENST00000494426 TSEN34Q9BSV6 310 aaKnown RBP26.91■■□□□ 1.9
CLIC3-203ENST00000494426 HTATIP2Q9BUP3 242 aa26.91■■□□□ 1.9
CLIC3-203ENST00000494426 PCDHA6Q9UN73 950 aa26.91■■□□□ 1.9
CLIC3-203ENST00000494426 PCDHA8Q9Y5H6 950 aa26.91■■□□□ 1.9
CLIC3-203ENST00000494426 ESYT2A0FGR8 921 aa26.9■■□□□ 1.9
CLIC3-203ENST00000494426 TXNP10599 105 aaKnown RBP26.9■■□□□ 1.9
CLIC3-203ENST00000494426 CLK2P49760 499 aaKnown RBP26.9■■□□□ 1.9
CLIC3-203ENST00000494426 BEX3Q00994 111 aa26.9■■□□□ 1.9
CLIC3-203ENST00000494426 ST3GAL1Q11201 340 aa26.9■■□□□ 1.9
CLIC3-203ENST00000494426 TTLL4Q14679 1199 aa26.9■■□□□ 1.9
CLIC3-203ENST00000494426 KCNA10Q16322 511 aa26.9■■□□□ 1.9
CLIC3-203ENST00000494426 TEX2Q8IWB9 1127 aa26.9■■□□□ 1.9
CLIC3-203ENST00000494426 GTF3C6Q969F1 213 aa26.9■■□□□ 1.9
CLIC3-203ENST00000494426 ZMYND12Q9H0C1 365 aa26.9■■□□□ 1.9
CLIC3-203ENST00000494426 SPC25Q9HBM1 224 aa26.9■■□□□ 1.9
CLIC3-203ENST00000494426 TMEM260Q9NX78 707 aa26.9■■□□□ 1.9
CLIC3-203ENST00000494426 VPS54Q9P1Q0 977 aa26.9■■□□□ 1.9
CLIC3-203ENST00000494426 DEXIO95424 95 aa26.89■■□□□ 1.9
CLIC3-203ENST00000494426 LY6KQ17RY6 165 aa26.89■■□□□ 1.9
CLIC3-203ENST00000494426 GNASQ5JWF2 1037 aa26.89■■□□□ 1.9
CLIC3-203ENST00000494426 FERMT2Q96AC1 680 aa26.89■■□□□ 1.9
CLIC3-203ENST00000494426 AP5M1Q9H0R1 490 aa26.89■■□□□ 1.9
CLIC3-203ENST00000494426 DDX41Q9UJV9 622 aaKnown RBP26.89■■□□□ 1.9
CLIC3-203ENST00000494426 NKRFO15226 690 aaKnown RBP eCLIP26.88■■□□□ 1.89
CLIC3-203ENST00000494426 ACLYP53396 1101 aa26.88■■□□□ 1.89
CLIC3-203ENST00000494426 LRRC26Q2I0M4 334 aa26.88■■□□□ 1.89
CLIC3-203ENST00000494426 PCNX4Q63HM2 1172 aa26.88■■□□□ 1.89
CLIC3-203ENST00000494426 DPF3Q92784 378 aa26.88■■□□□ 1.89
CLIC3-203ENST00000494426 PGBD1Q96JS3 809 aa26.88■■□□□ 1.89
CLIC3-203ENST00000494426 AIFM3Q96NN9 605 aa26.88■■□□□ 1.89
CLIC3-203ENST00000494426 GLT8D2Q9H1C3 349 aa26.88■■□□□ 1.89
CLIC3-203ENST00000494426 LIMCH1Q9UPQ0 1083 aa26.88■■□□□ 1.89
CLIC3-203ENST00000494426 MOXD2PA6NHM9 499 aa26.87■■□□□ 1.89
CLIC3-203ENST00000494426 SPDYE3A6NKU9 549 aa26.87■■□□□ 1.89
CLIC3-203ENST00000494426 CDKL5O76039 1030 aa26.87■■□□□ 1.89
CLIC3-203ENST00000494426 ASGR1P07306 291 aa26.87■■□□□ 1.89
CLIC3-203ENST00000494426 RABEP1Q15276 862 aa26.87■■□□□ 1.89
CLIC3-203ENST00000494426 FSCN1Q16658 493 aaKnown RBP26.87■■□□□ 1.89
CLIC3-203ENST00000494426 CCDC12Q8WUD4 166 aaPredicted RBP26.87■■□□□ 1.89
CLIC3-203ENST00000494426 SH3GLB2Q9NR46 395 aa26.87■■□□□ 1.89
CLIC3-203ENST00000494426 RTEL1Q9NZ71 1219 aa26.87■■□□□ 1.89
CLIC3-203ENST00000494426 A0A1W2PQ45 241 aaPredicted RBP26.86■■□□□ 1.89
CLIC3-203ENST00000494426 A0A1W2PQY0 241 aa26.86■■□□□ 1.89
CLIC3-203ENST00000494426 ATN1P54259 1190 aaPredicted RBP26.86■■□□□ 1.89
CLIC3-203ENST00000494426 XRRA1Q6P2D8 792 aa26.86■■□□□ 1.89
CLIC3-203ENST00000494426 SLC39A5Q6ZMH5 540 aa26.86■■□□□ 1.89
CLIC3-203ENST00000494426 PCSK9Q8NBP7 692 aaKnown RBP26.86■■□□□ 1.89
CLIC3-203ENST00000494426 OR6J1Q8NGC5 347 aa26.86■■□□□ 1.89
CLIC3-203ENST00000494426 INPP4AQ96PE3 977 aaPredicted RBP26.86■■□□□ 1.89
CLIC3-203ENST00000494426 C6orf50Q9HD87 102 aa26.86■■□□□ 1.89
CLIC3-203ENST00000494426 STK36Q9NRP7 1315 aa26.86■■□□□ 1.89
CLIC3-203ENST00000494426 MYH7BA7E2Y1 1941 aa26.85■■□□□ 1.89
CLIC3-203ENST00000494426 STAM2O75886 525 aa26.85■■□□□ 1.89
CLIC3-203ENST00000494426 FOSP01100 380 aaPredicted RBP26.85■■□□□ 1.89
CLIC3-203ENST00000494426 FDPSP14324 419 aaKnown RBP26.85■■□□□ 1.89
CLIC3-203ENST00000494426 SP2Q02086 613 aa26.85■■□□□ 1.89
CLIC3-203ENST00000494426 SEMA3FQ13275 785 aa26.85■■□□□ 1.89
CLIC3-203ENST00000494426 JAKMIP3Q5VZ66 844 aa26.85■■□□□ 1.89
CLIC3-203ENST00000494426 ANO3Q9BYT9 981 aa26.85■■□□□ 1.89
CLIC3-203ENST00000494426 MRVI1Q9Y6F6 885 aa26.85■■□□□ 1.89
CLIC3-203ENST00000494426 ARHGAP1Q07960 439 aa26.84■■□□□ 1.89
CLIC3-203ENST00000494426 AP3B2Q13367 1082 aa26.84■■□□□ 1.89
CLIC3-203ENST00000494426 NSUN7Q8NE18 718 aaKnown RBP26.84■■□□□ 1.89
CLIC3-203ENST00000494426 CCDC148Q8NFR7 591 aa26.84■■□□□ 1.89
CLIC3-203ENST00000494426 GNA11P29992 359 aa26.83■■□□□ 1.89
CLIC3-203ENST00000494426 ICAM3P32942 547 aa26.83■■□□□ 1.89
CLIC3-203ENST00000494426 KCNV1Q6PIU1 500 aa26.83■■□□□ 1.89
CLIC3-203ENST00000494426 UBIAD1Q9Y5Z9 338 aa26.83■■□□□ 1.89
CLIC3-203ENST00000494426 PDE4DIPQ5VU43 2346 aa26.83■■□□□ 1.89
CLIC3-203ENST00000494426 A6NJR5 290 aa26.82■■□□□ 1.88
CLIC3-203ENST00000494426 SPATA31C2B4DYI2 1134 aa26.82■■□□□ 1.88
CLIC3-203ENST00000494426 GH1P01241 217 aa26.82■■□□□ 1.88
CLIC3-203ENST00000494426 TGFB3P10600 412 aa26.82■■□□□ 1.88
CLIC3-203ENST00000494426 ITGB5P18084 799 aa26.82■■□□□ 1.88
CLIC3-203ENST00000494426 SNX17Q15036 470 aa26.82■■□□□ 1.88
CLIC3-203ENST00000494426 RASGRP4Q8TDF6 673 aa26.82■■□□□ 1.88
CLIC3-203ENST00000494426 BCAS3Q9H6U6 928 aa26.82■■□□□ 1.88
CLIC3-203ENST00000494426 ORC3Q9UBD5 711 aaPredicted RBP26.82■■□□□ 1.88
CLIC3-203ENST00000494426 EVI5O60447 810 aa26.81■■□□□ 1.88
CLIC3-203ENST00000494426 JAK2O60674 1132 aa26.81■■□□□ 1.88
CLIC3-203ENST00000494426 SREBF1P36956 1147 aa26.81■■□□□ 1.88
CLIC3-203ENST00000494426 NLRP5P59047 1200 aa26.81■■□□□ 1.88
CLIC3-203ENST00000494426 NPY5RQ15761 445 aa26.81■■□□□ 1.88
CLIC3-203ENST00000494426 GNPTABQ3T906 1256 aa26.81■■□□□ 1.88
CLIC3-203ENST00000494426 CXCL17Q6UXB2 119 aa26.81■■□□□ 1.88
CLIC3-203ENST00000494426 REXO1Q8N1G1 1221 aaKnown RBP26.81■■□□□ 1.88
CLIC3-203ENST00000494426 CRYGNQ8WXF5 182 aa26.81■■□□□ 1.88
CLIC3-203ENST00000494426 ZSCAN31Q96LW9 406 aaPredicted RBP26.81■■□□□ 1.88
CLIC3-203ENST00000494426 EHMT1Q9H9B1 1298 aa26.81■■□□□ 1.88
CLIC3-203ENST00000494426 STARD7Q9NQZ5 370 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms