RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 TM6SF1Q9BZW5 370 aa26.08■■□□□ 1.77
SNIP1-203ENST00000493916 POLR3EQ9NVU0 708 aa26.08■■□□□ 1.77
SNIP1-203ENST00000493916 CCDC196A0A1B0GTZ2 297 aa26.07■■□□□ 1.76
SNIP1-203ENST00000493916 A6NJR5 290 aa26.07■■□□□ 1.76
SNIP1-203ENST00000493916 DCDC2CA8MYV0 355 aa26.07■■□□□ 1.76
SNIP1-203ENST00000493916 MYCLP12524 364 aaPredicted RBP26.07■■□□□ 1.76
SNIP1-203ENST00000493916 CDC27P30260 824 aa26.07■■□□□ 1.76
SNIP1-203ENST00000493916 SH3RF1Q7Z6J0 888 aa26.07■■□□□ 1.76
SNIP1-203ENST00000493916 SMARCC2Q8TAQ2 1214 aa26.07■■□□□ 1.76
SNIP1-203ENST00000493916 LBHD1Q9BQE6 289 aaPredicted RBP26.07■■□□□ 1.76
SNIP1-203ENST00000493916 PCDH10Q9P2E7 1040 aa26.07■■□□□ 1.76
SNIP1-203ENST00000493916 NAP1L2Q9ULW6 460 aaPredicted RBP26.07■■□□□ 1.76
SNIP1-203ENST00000493916 TRIM43BA6NCK2 446 aa26.06■■□□□ 1.76
SNIP1-203ENST00000493916 KIAA0355O15063 1070 aa26.06■■□□□ 1.76
SNIP1-203ENST00000493916 RGS20O76081 388 aa26.06■■□□□ 1.76
SNIP1-203ENST00000493916 GH1P01241 217 aa26.06■■□□□ 1.76
SNIP1-203ENST00000493916 EVCP57679 992 aa26.06■■□□□ 1.76
SNIP1-203ENST00000493916 MDM2Q00987 491 aaPredicted RBP26.06■■□□□ 1.76
SNIP1-203ENST00000493916 FAAP100Q0VG06 881 aa26.06■■□□□ 1.76
SNIP1-203ENST00000493916 LY6KQ17RY6 165 aa26.06■■□□□ 1.76
SNIP1-203ENST00000493916 USP17L6PQ6QN14 398 aa26.06■■□□□ 1.76
SNIP1-203ENST00000493916 HEATR3Q7Z4Q2 680 aa26.06■■□□□ 1.76
SNIP1-203ENST00000493916 TRIM43Q96BQ3 446 aaPredicted RBP26.06■■□□□ 1.76
SNIP1-203ENST00000493916 PSTPIP2Q9H939 334 aa26.06■■□□□ 1.76
SNIP1-203ENST00000493916 DDX41Q9UJV9 622 aaKnown RBP26.06■■□□□ 1.76
SNIP1-203ENST00000493916 CYP46A1Q9Y6A2 500 aa26.06■■□□□ 1.76
SNIP1-203ENST00000493916 MRVI1Q9Y6F6 885 aa26.06■■□□□ 1.76
SNIP1-203ENST00000493916 hCG_1984214I3L0E3 225 aa26.05■■□□□ 1.76
SNIP1-203ENST00000493916 KPNA6O60684 536 aa26.05■■□□□ 1.76
SNIP1-203ENST00000493916 PURAQ00577 322 aaKnown RBP26.05■■□□□ 1.76
SNIP1-203ENST00000493916 ARHGAP1Q07960 439 aa26.05■■□□□ 1.76
SNIP1-203ENST00000493916 WWC2Q6AWC2 1192 aa26.05■■□□□ 1.76
SNIP1-203ENST00000493916 PPP1R18Q6NYC8 613 aa26.05■■□□□ 1.76
SNIP1-203ENST00000493916 KCNV1Q6PIU1 500 aa26.05■■□□□ 1.76
SNIP1-203ENST00000493916 TEX2Q8IWB9 1127 aa26.05■■□□□ 1.76
SNIP1-203ENST00000493916 FAM126BQ8IXS8 530 aa26.05■■□□□ 1.76
SNIP1-203ENST00000493916 ZNF713Q8N859 430 aaPredicted RBP26.05■■□□□ 1.76
SNIP1-203ENST00000493916 GPKOWQ92917 476 aaPredicted RBP eCLIP26.05■■□□□ 1.76
SNIP1-203ENST00000493916 EMID1Q96A84 441 aaPredicted RBP26.05■■□□□ 1.76
SNIP1-203ENST00000493916 UBE2OQ9C0C9 1292 aaKnown RBP26.05■■□□□ 1.76
SNIP1-203ENST00000493916 STAM2O75886 525 aa26.04■■□□□ 1.76
SNIP1-203ENST00000493916 ITGA7Q13683 1181 aa26.04■■□□□ 1.76
SNIP1-203ENST00000493916 V9GY48 417 aaPredicted RBP26.04■■□□□ 1.76
SNIP1-203ENST00000493916 GRIN2DO15399 1336 aa26.04■■□□□ 1.76
SNIP1-203ENST00000493916 TRIOBPQ9H2D6 2365 aa26.03■■□□□ 1.76
SNIP1-203ENST00000493916 EIF5BO60841 1220 aaKnown RBP26.03■■□□□ 1.76
SNIP1-203ENST00000493916 MYL3P08590 195 aa26.03■■□□□ 1.76
SNIP1-203ENST00000493916 ADD1P35611 737 aaKnown RBP26.03■■□□□ 1.76
SNIP1-203ENST00000493916 FXR1P51114 621 aaKnown RBP eCLIP26.03■■□□□ 1.76
SNIP1-203ENST00000493916 XRRA1Q6P2D8 792 aa26.03■■□□□ 1.76
SNIP1-203ENST00000493916 MTG1Q9BT17 334 aaPredicted RBP26.03■■□□□ 1.76
SNIP1-203ENST00000493916 TMEM39AQ9NV64 488 aa26.03■■□□□ 1.76
SNIP1-203ENST00000493916 TBX21Q9UL17 535 aa26.03■■□□□ 1.76
SNIP1-203ENST00000493916 TGFB3P10600 412 aa26.02■■□□□ 1.76
SNIP1-203ENST00000493916 MRPS9P82933 396 aaKnown RBP26.02■■□□□ 1.76
SNIP1-203ENST00000493916 TOB2Q14106 344 aaPredicted RBP26.02■■□□□ 1.76
SNIP1-203ENST00000493916 INPP4AQ96PE3 977 aaPredicted RBP26.02■■□□□ 1.76
SNIP1-203ENST00000493916 STXBP3O00186 592 aa26.01■■□□□ 1.75
SNIP1-203ENST00000493916 TLR3O15455 904 aaKnown RBP26.01■■□□□ 1.75
SNIP1-203ENST00000493916 CD4P01730 458 aa26.01■■□□□ 1.75
SNIP1-203ENST00000493916 MMP3P08254 477 aa26.01■■□□□ 1.75
SNIP1-203ENST00000493916 ANAPC15P60006 121 aa26.01■■□□□ 1.75
SNIP1-203ENST00000493916 PSMC6P62333 389 aa26.01■■□□□ 1.75
SNIP1-203ENST00000493916 PCNX4Q63HM2 1172 aa26.01■■□□□ 1.75
SNIP1-203ENST00000493916 TDHQ8IZJ6 230 aa26.01■■□□□ 1.75
SNIP1-203ENST00000493916 AFG1LQ8WV93 481 aa26.01■■□□□ 1.75
SNIP1-203ENST00000493916 BADQ92934 168 aa26.01■■□□□ 1.75
SNIP1-203ENST00000493916 BARHL2Q9NY43 387 aa26.01■■□□□ 1.75
SNIP1-203ENST00000493916 ITGB8P26012 769 aa26■■□□□ 1.75
SNIP1-203ENST00000493916 PDIA3P30101 505 aaKnown RBP26■■□□□ 1.75
SNIP1-203ENST00000493916 NAPAP54920 295 aa26■■□□□ 1.75
SNIP1-203ENST00000493916 LAMC2Q13753 1193 aa26■■□□□ 1.75
SNIP1-203ENST00000493916 UBE2SQ16763 222 aa26■■□□□ 1.75
SNIP1-203ENST00000493916 GNPTABQ3T906 1256 aa26■■□□□ 1.75
SNIP1-203ENST00000493916 TYW1BQ6NUM6 668 aa26■■□□□ 1.75
SNIP1-203ENST00000493916 PPTC7Q8NI37 304 aa26■■□□□ 1.75
SNIP1-203ENST00000493916 UPF3BQ9BZI7 483 aaKnown RBP26■■□□□ 1.75
SNIP1-203ENST00000493916 SCN10AQ9Y5Y9 1956 aa25.99■■□□□ 1.75
SNIP1-203ENST00000493916 RAG1P15918 1043 aa25.99■■□□□ 1.75
SNIP1-203ENST00000493916 UBA1P22314 1058 aaKnown RBP25.99■■□□□ 1.75
SNIP1-203ENST00000493916 ICAM3P32942 547 aa25.99■■□□□ 1.75
SNIP1-203ENST00000493916 PFKFB3Q16875 520 aaPredicted RBP25.99■■□□□ 1.75
SNIP1-203ENST00000493916 DHX37Q8IY37 1157 aaKnown RBP25.99■■□□□ 1.75
SNIP1-203ENST00000493916 RIC8AQ9NPQ8 531 aa25.99■■□□□ 1.75
SNIP1-203ENST00000493916 SPDYE3A6NKU9 549 aa25.98■■□□□ 1.75
SNIP1-203ENST00000493916 CELF3Q5SZQ8 465 aaKnown RBP25.98■■□□□ 1.75
SNIP1-203ENST00000493916 IL17RAQ96F46 866 aa25.98■■□□□ 1.75
SNIP1-203ENST00000493916 ZFP91Q96JP5 570 aaPredicted RBP25.98■■□□□ 1.75
SNIP1-203ENST00000493916 GLT8D2Q9H1C3 349 aa25.98■■□□□ 1.75
SNIP1-203ENST00000493916 LAMA3Q16787 3333 aa25.98■■□□□ 1.75
SNIP1-203ENST00000493916 PRPF3O43395 683 aaKnown RBP25.97■■□□□ 1.75
SNIP1-203ENST00000493916 TIMP1P01033 207 aa25.97■■□□□ 1.75
SNIP1-203ENST00000493916 HOXD8P13378 290 aaPredicted RBP25.97■■□□□ 1.75
SNIP1-203ENST00000493916 SCG2P13521 617 aa25.97■■□□□ 1.75
SNIP1-203ENST00000493916 ADCY7P51828 1080 aa25.97■■□□□ 1.75
SNIP1-203ENST00000493916 SP2Q02086 613 aa25.97■■□□□ 1.75
SNIP1-203ENST00000493916 NTRK3Q16288 839 aa25.97■■□□□ 1.75
SNIP1-203ENST00000493916 DGKDQ16760 1214 aa25.97■■□□□ 1.75
SNIP1-203ENST00000493916 MYSM1Q5VVJ2 828 aa25.97■■□□□ 1.75
SNIP1-203ENST00000493916 NFRKBQ6P4R8 1299 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms