RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 LBX2Q6XYB7 198 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 ANKLE2Q86XL3 938 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 MIB1Q86YT6 1006 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 C1QL4Q86Z23 238 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 TEX2Q8IWB9 1127 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 PMFBP1Q8TBY8 1022 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 THAP3Q8WTV1 239 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-216ENST00000493758 EXOC2Q96KP1 924 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 TOX2Q96NM4 488 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 AP5M1Q9H0R1 490 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 PFDN2Q9UHV9 154 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 SMG5Q9UPR3 1016 aaKnown RBP6.61□□□□□ -1.35
ITGB1-216ENST00000493758 CDK11AQ9UQ88 783 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-216ENST00000493758 KDM2BQ8NHM5 1336 aa6.6□□□□□ -1.35
ITGB1-216ENST00000493758 CCDC163A0A0D9SF12 145 aa6.6□□□□□ -1.35
ITGB1-216ENST00000493758 WNT9AO14904 365 aa6.6□□□□□ -1.35
ITGB1-216ENST00000493758 FPR2P25090 351 aa6.6□□□□□ -1.35
ITGB1-216ENST00000493758 CHRNA2Q15822 529 aa6.6□□□□□ -1.35
ITGB1-216ENST00000493758 ZNF124Q15973 351 aa6.6□□□□□ -1.35
ITGB1-216ENST00000493758 TMEM132EQ6IEE7 984 aa6.6□□□□□ -1.35
ITGB1-216ENST00000493758 USP53Q70EK8 1073 aa6.6□□□□□ -1.35
ITGB1-216ENST00000493758 ZSWIM2Q8NEG5 633 aa6.6□□□□□ -1.35
ITGB1-216ENST00000493758 LNPKQ9C0E8 428 aa6.6□□□□□ -1.35
ITGB1-216ENST00000493758 EPB41L1Q9H4G0 881 aa6.6□□□□□ -1.35
ITGB1-216ENST00000493758 PCDHA2Q9Y5H9 948 aa6.6□□□□□ -1.35
ITGB1-216ENST00000493758 ZC3H12DA2A288 527 aaKnown RBP6.59□□□□□ -1.35
ITGB1-216ENST00000493758 FAM153BP0C7A2 387 aa6.59□□□□□ -1.35
ITGB1-216ENST00000493758 TRIM61Q5EBN2 209 aa6.59□□□□□ -1.35
ITGB1-216ENST00000493758 FOXB2Q5VYV0 432 aa6.59□□□□□ -1.35
ITGB1-216ENST00000493758 CEP68Q76N32 757 aa6.59□□□□□ -1.35
ITGB1-216ENST00000493758 USP33Q8TEY7 942 aa6.59□□□□□ -1.35
ITGB1-216ENST00000493758 PTPRN2Q92932 1015 aa6.59□□□□□ -1.35
ITGB1-216ENST00000493758 TRMT2BQ96GJ1 504 aaKnown RBP6.59□□□□□ -1.35
ITGB1-216ENST00000493758 DNAJC7Q99615 494 aa6.59□□□□□ -1.35
ITGB1-216ENST00000493758 DHRS4Q9BTZ2 278 aa6.59□□□□□ -1.35
ITGB1-216ENST00000493758 PDGFDQ9GZP0 370 aaPredicted RBP6.59□□□□□ -1.35
ITGB1-216ENST00000493758 COA3Q9Y2R0 106 aaPredicted RBP6.59□□□□□ -1.35
ITGB1-216ENST00000493758 MRPS23Q9Y3D9 190 aaKnown RBP6.59□□□□□ -1.35
ITGB1-216ENST00000493758 HCFC2Q9Y5Z7 792 aa6.59□□□□□ -1.35
ITGB1-216ENST00000493758 IRAK3Q9Y616 596 aa6.59□□□□□ -1.35
ITGB1-216ENST00000493758 RFXAPO00287 272 aa6.58□□□□□ -1.36
ITGB1-216ENST00000493758 AQP7O14520 342 aa6.58□□□□□ -1.36
ITGB1-216ENST00000493758 KCNQ2O43526 872 aa6.58□□□□□ -1.36
ITGB1-216ENST00000493758 ASGR2P07307 311 aa6.58□□□□□ -1.36
ITGB1-216ENST00000493758 NCAM1P13591 858 aa6.58□□□□□ -1.36
ITGB1-216ENST00000493758 PFKLP17858 780 aa6.58□□□□□ -1.36
ITGB1-216ENST00000493758 NAT1P18440 290 aa6.58□□□□□ -1.36
ITGB1-216ENST00000493758 GRK2P25098 689 aa6.58□□□□□ -1.36
ITGB1-216ENST00000493758 GRK3P35626 688 aa6.58□□□□□ -1.36
ITGB1-216ENST00000493758 GABREP78334 506 aa6.58□□□□□ -1.36
ITGB1-216ENST00000493758 HABP4Q5JVS0 413 aaKnown RBP6.58□□□□□ -1.36
ITGB1-216ENST00000493758 AMIGO3Q86WK7 504 aa6.58□□□□□ -1.36
ITGB1-216ENST00000493758 IFNL3Q8IZI9 196 aa6.58□□□□□ -1.36
ITGB1-216ENST00000493758 PHOSPHO1Q8TCT1 267 aa6.58□□□□□ -1.36
ITGB1-216ENST00000493758 CDC6Q99741 560 aa6.58□□□□□ -1.36
ITGB1-216ENST00000493758 SGPP1Q9BX95 441 aa6.58□□□□□ -1.36
ITGB1-216ENST00000493758 DBR1Q9UK59 544 aaKnown RBP6.58□□□□□ -1.36
ITGB1-216ENST00000493758 NPIPB6E9PJ23 425 aa6.57□□□□□ -1.36
ITGB1-216ENST00000493758 SGSM2O43147 1006 aa6.57□□□□□ -1.36
ITGB1-216ENST00000493758 MSCO60682 206 aa6.57□□□□□ -1.36
ITGB1-216ENST00000493758 DGKIO75912 1065 aa6.57□□□□□ -1.36
ITGB1-216ENST00000493758 PMLP29590 882 aa6.57□□□□□ -1.36
ITGB1-216ENST00000493758 BMS1Q14692 1282 aaKnown RBP6.57□□□□□ -1.36
ITGB1-216ENST00000493758 FAM209AQ5JX71 171 aa6.57□□□□□ -1.36
ITGB1-216ENST00000493758 LCE3BQ5TA77 95 aa6.57□□□□□ -1.36
ITGB1-216ENST00000493758 B3GNT8Q7Z7M8 397 aa6.57□□□□□ -1.36
ITGB1-216ENST00000493758 TMEFF1Q8IYR6 380 aa6.57□□□□□ -1.36
ITGB1-216ENST00000493758 GSTCDQ8NEC7 633 aa6.57□□□□□ -1.36
ITGB1-216ENST00000493758 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.57□□□□□ -1.36
ITGB1-216ENST00000493758 ALG3Q92685 438 aa6.57□□□□□ -1.36
ITGB1-216ENST00000493758 CLDND1Q9NY35 253 aa6.57□□□□□ -1.36
ITGB1-216ENST00000493758 TADA3O75528 432 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 HTRA3P83110 453 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 SSPNQ14714 243 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 CCDC144BQ3MJ40 725 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 ZNF385BQ569K4 471 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 KCNT2Q6UVM3 1135 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 FAM129CQ86XR2 697 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 SIAH1Q8IUQ4 282 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 TMEM151BQ8IW70 566 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 LRRC56Q8IYG6 542 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-216ENST00000493758 TTLL11Q8NHH1 800 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 MRFAP1L1Q96HT8 127 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 IPO9Q96P70 1041 aaKnown RBP6.56□□□□□ -1.36
ITGB1-216ENST00000493758 MRPL4Q9BYD3 311 aaKnown RBP6.56□□□□□ -1.36
ITGB1-216ENST00000493758 PCDH18Q9HCL0 1135 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 EPB41L4AQ9HCS5 686 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-216ENST00000493758 BTG4Q9NY30 223 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 HSPBP1Q9NZL4 362 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 CNOT6Q9ULM6 557 aaKnown RBP6.56□□□□□ -1.36
ITGB1-216ENST00000493758 PLA2G2DQ9UNK4 145 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 KCTD3Q9Y597 815 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 PTCH2Q9Y6C5 1203 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 ASXL2Q76L83 1435 aa6.56□□□□□ -1.36
ITGB1-216ENST00000493758 ARVCFO00192 962 aa6.55□□□□□ -1.36
ITGB1-216ENST00000493758 HGSO14964 777 aaPredicted RBP6.55□□□□□ -1.36
ITGB1-216ENST00000493758 BUB1BO60566 1050 aaPredicted RBP6.55□□□□□ -1.36
ITGB1-216ENST00000493758 MAFKO60675 156 aa6.55□□□□□ -1.36
ITGB1-216ENST00000493758 EFCAB14O75071 495 aa6.55□□□□□ -1.36
ITGB1-216ENST00000493758 CACNB2Q08289 660 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms