RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 LY6KQ17RY6 165 aa20.71■□□□□ 0.91
NUP50-218ENST00000493456 TMCO2Q7Z6W1 182 aaPredicted RBP20.71■□□□□ 0.91
NUP50-218ENST00000493456 TICAM2Q86XR7 235 aa20.71■□□□□ 0.91
NUP50-218ENST00000493456 KHSRPQ92945 711 aaKnown RBP eCLIP20.71■□□□□ 0.911e-7■□□□□ 8.2
NUP50-218ENST00000493456 IWS1Q96ST2 819 aa20.71■□□□□ 0.91
NUP50-218ENST00000493456 UBE2ZQ9H832 354 aaPredicted RBP20.71■□□□□ 0.91
NUP50-218ENST00000493456 SUGCTQ9HAC7 445 aa20.71■□□□□ 0.91
NUP50-218ENST00000493456 IKBKEQ14164 716 aa20.7■□□□□ 0.9
NUP50-218ENST00000493456 STXBP2Q15833 593 aa20.7■□□□□ 0.9
NUP50-218ENST00000493456 SEPT14Q6ZU15 432 aa20.7■□□□□ 0.9
NUP50-218ENST00000493456 C7orf31Q8N865 590 aa20.7■□□□□ 0.9
NUP50-218ENST00000493456 EMID1Q96A84 441 aaPredicted RBP20.7■□□□□ 0.9
NUP50-218ENST00000493456 MTUS1Q9ULD2 1270 aa20.7■□□□□ 0.9
NUP50-218ENST00000493456 ABCB11O95342 1321 aa20.7■□□□□ 0.9
NUP50-218ENST00000493456 SIP14410 1827 aa20.69■□□□□ 0.9
NUP50-218ENST00000493456 BRWD1Q9NSI6 2320 aa20.69■□□□□ 0.9
NUP50-218ENST00000493456 LINC01553A4QN01 128 aa20.69■□□□□ 0.9
NUP50-218ENST00000493456 PTK7Q13308 1070 aa20.69■□□□□ 0.9
NUP50-218ENST00000493456 LEXMQ3ZCV2 418 aa20.69■□□□□ 0.9
NUP50-218ENST00000493456 MCMDC2Q4G0Z9 681 aa20.69■□□□□ 0.9
NUP50-218ENST00000493456 MFSD6Q6ZSS7 791 aa20.69■□□□□ 0.9
NUP50-218ENST00000493456 MCF2L2Q86YR7 1114 aa20.69■□□□□ 0.9
NUP50-218ENST00000493456 HDAC6Q9UBN7 1215 aa20.69■□□□□ 0.9
NUP50-218ENST00000493456 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.68■□□□□ 0.9
NUP50-218ENST00000493456 F2P00734 622 aa20.68■□□□□ 0.9
NUP50-218ENST00000493456 HSPD1P10809 573 aaKnown RBP20.68■□□□□ 0.9
NUP50-218ENST00000493456 NT5C2P49902 561 aa20.68■□□□□ 0.9
NUP50-218ENST00000493456 CDC37Q16543 378 aaPredicted RBP20.68■□□□□ 0.9
NUP50-218ENST00000493456 CHST3Q7LGC8 479 aa20.68■□□□□ 0.9
NUP50-218ENST00000493456 SYTL5Q8TDW5 730 aaPredicted RBP20.68■□□□□ 0.9
NUP50-218ENST00000493456 CRBNQ96SW2 442 aa20.68■□□□□ 0.9
NUP50-218ENST00000493456 RMDN3Q96TC7 470 aa20.68■□□□□ 0.9
NUP50-218ENST00000493456 RNF41Q9H4P4 317 aaPredicted RBP20.68■□□□□ 0.9
NUP50-218ENST00000493456 ZBTB47Q9UFB7 747 aaPredicted RBP20.68■□□□□ 0.9
NUP50-218ENST00000493456 PIEZO1Q92508 2521 aa20.67■□□□□ 0.9
NUP50-218ENST00000493456 KIAA1217Q5T5P2 1943 aa20.67■□□□□ 0.9
NUP50-218ENST00000493456 A0A0D9SFI3 127 aa20.67■□□□□ 0.9
NUP50-218ENST00000493456 FAM86C2PA6NEL3 165 aa20.67■□□□□ 0.9
NUP50-218ENST00000493456 PSEN2P49810 448 aa20.67■□□□□ 0.9
NUP50-218ENST00000493456 MFSD10Q14728 455 aa20.67■□□□□ 0.9
NUP50-218ENST00000493456 DIEXFQ68CQ4 756 aaKnown RBP20.67■□□□□ 0.9
NUP50-218ENST00000493456 DGKHQ86XP1 1220 aa20.67■□□□□ 0.9
NUP50-218ENST00000493456 PPTC7Q8NI37 304 aa20.67■□□□□ 0.9
NUP50-218ENST00000493456 ESR2Q92731 530 aa20.67■□□□□ 0.9
NUP50-218ENST00000493456 FAM227BQ96M60 508 aa20.67■□□□□ 0.9
NUP50-218ENST00000493456 TAAR1Q96RJ0 339 aa20.67■□□□□ 0.9
NUP50-218ENST00000493456 CD320Q9NPF0 282 aa20.67■□□□□ 0.9
NUP50-218ENST00000493456 DDX41Q9UJV9 622 aaKnown RBP20.67■□□□□ 0.9
NUP50-218ENST00000493456 INSL6Q9Y581 213 aa20.67■□□□□ 0.9
NUP50-218ENST00000493456 PCDHB15Q9Y5E8 787 aa20.67■□□□□ 0.9
NUP50-218ENST00000493456 EMSYQ7Z589 1322 aa20.67■□□□□ 0.9
NUP50-218ENST00000493456 PRR33A8MZF0 331 aa20.66■□□□□ 0.9
NUP50-218ENST00000493456 GOLGA8HP0CJ92 632 aa20.66■□□□□ 0.9
NUP50-218ENST00000493456 HAND2P61296 217 aa20.66■□□□□ 0.9
NUP50-218ENST00000493456 LAMC2Q13753 1193 aa20.66■□□□□ 0.9
NUP50-218ENST00000493456 KIAA0753Q2KHM9 967 aa20.66■□□□□ 0.9
NUP50-218ENST00000493456 TCTN1Q2MV58 587 aa20.66■□□□□ 0.9
NUP50-218ENST00000493456 TRIM71Q2Q1W2 868 aaKnown RBP20.66■□□□□ 0.9
NUP50-218ENST00000493456 FAM178BQ8IXR5 827 aa20.66■□□□□ 0.9
NUP50-218ENST00000493456 ALG1Q9BT22 464 aa20.66■□□□□ 0.9
NUP50-218ENST00000493456 UBA5Q9GZZ9 404 aa20.66■□□□□ 0.9
NUP50-218ENST00000493456 COL20A1Q9P218 1284 aa20.66■□□□□ 0.9
NUP50-218ENST00000493456 CTNNA3Q9UI47 895 aa20.66■□□□□ 0.9
NUP50-218ENST00000493456 WDFY4Q6ZS81 3184 aa20.65■□□□□ 0.9
NUP50-218ENST00000493456 HAS3O00219 553 aa20.65■□□□□ 0.9
NUP50-218ENST00000493456 LGR5O75473 907 aa20.65■□□□□ 0.9
NUP50-218ENST00000493456 EIF3JO75822 258 aaKnown RBP20.65■□□□□ 0.9
NUP50-218ENST00000493456 KCNA5P22460 613 aa20.65■□□□□ 0.9
NUP50-218ENST00000493456 PUS10Q3MIT2 529 aaKnown RBP20.65■□□□□ 0.9
NUP50-218ENST00000493456 CCDC178Q5BJE1 867 aa20.65■□□□□ 0.9
NUP50-218ENST00000493456 ZNF618Q5T7W0 954 aa20.65■□□□□ 0.9
NUP50-218ENST00000493456 ARHGEF16Q5VV41 709 aa20.65■□□□□ 0.9
NUP50-218ENST00000493456 TRAF7Q6Q0C0 670 aa20.65■□□□□ 0.9
NUP50-218ENST00000493456 TBC1D10CQ8IV04 446 aa20.65■□□□□ 0.9
NUP50-218ENST00000493456 GJD3Q8N144 294 aa20.65■□□□□ 0.9
NUP50-218ENST00000493456 FBXO22Q8NEZ5 403 aa20.65■□□□□ 0.9
NUP50-218ENST00000493456 TBC1D5Q92609 795 aa20.65■□□□□ 0.9
NUP50-218ENST00000493456 MRPL11Q9Y3B7 192 aaKnown RBP20.65■□□□□ 0.9
NUP50-218ENST00000493456 MRVI1Q9Y6F6 885 aa20.65■□□□□ 0.9
NUP50-218ENST00000493456 CCDC171Q6TFL3 1326 aa20.64■□□□□ 0.89
NUP50-218ENST00000493456 HOXD8P13378 290 aaPredicted RBP20.64■□□□□ 0.89
NUP50-218ENST00000493456 ZNF589Q86UQ0 364 aaPredicted RBP20.64■□□□□ 0.89
NUP50-218ENST00000493456 ADGRF4Q8IZF3 695 aa20.64■□□□□ 0.89
NUP50-218ENST00000493456 PNMA1Q8ND90 353 aa20.64■□□□□ 0.89
NUP50-218ENST00000493456 CPVLQ9H3G5 476 aa20.64■□□□□ 0.89
NUP50-218ENST00000493456 MUC6Q6W4X9 2439 aa20.64■□□□□ 0.89
NUP50-218ENST00000493456 AMHP03971 560 aa20.63■□□□□ 0.89
NUP50-218ENST00000493456 ZNF286BP0CG31 522 aa20.63■□□□□ 0.89
NUP50-218ENST00000493456 ALADP13716 330 aa20.63■□□□□ 0.89
NUP50-218ENST00000493456 EIF2AK2P19525 551 aaKnown RBP20.63■□□□□ 0.89
NUP50-218ENST00000493456 MBTPS1Q14703 1052 aa20.63■□□□□ 0.89
NUP50-218ENST00000493456 PTPROQ16827 1216 aa20.63■□□□□ 0.89
NUP50-218ENST00000493456 ASPRV1Q53RT3 343 aa20.63■□□□□ 0.89
NUP50-218ENST00000493456 FAM117BQ6P1L5 589 aa20.63■□□□□ 0.89
NUP50-218ENST00000493456 IQCA1Q86XH1 822 aa20.63■□□□□ 0.89
NUP50-218ENST00000493456 DHX37Q8IY37 1157 aaKnown RBP20.63■□□□□ 0.89
NUP50-218ENST00000493456 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.63■□□□□ 0.89
NUP50-218ENST00000493456 MRPL38Q96DV4 380 aaKnown RBP20.63■□□□□ 0.89
NUP50-218ENST00000493456 SAMD11Q96NU1 681 aa20.63■□□□□ 0.89
NUP50-218ENST00000493456 PXMP2Q9NR77 195 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms