RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 SYTL5Q8TDW5 730 aaPredicted RBP25.13■■□□□ 1.61
PFDN4-205ENST00000493356 NSUN6Q8TEA1 469 aaKnown RBP25.13■■□□□ 1.61
PFDN4-205ENST00000493356 ESR2Q92731 530 aa25.13■■□□□ 1.61
PFDN4-205ENST00000493356 FAM122AQ96E09 287 aa25.13■■□□□ 1.61
PFDN4-205ENST00000493356 RNF41Q9H4P4 317 aaPredicted RBP25.13■■□□□ 1.61
PFDN4-205ENST00000493356 ABCB11O95342 1321 aa25.12■■□□□ 1.61
PFDN4-205ENST00000493356 NEDD4P46934 1319 aa25.12■■□□□ 1.61
PFDN4-205ENST00000493356 MYH6P13533 1939 aa25.12■■□□□ 1.61
PFDN4-205ENST00000493356 CASTP20810 708 aaKnown RBP25.12■■□□□ 1.61
PFDN4-205ENST00000493356 DEFB103AP81534 67 aa25.12■■□□□ 1.61
PFDN4-205ENST00000493356 DGKHQ86XP1 1220 aa25.12■■□□□ 1.61
PFDN4-205ENST00000493356 EPHX3Q9H6B9 360 aa25.12■■□□□ 1.61
PFDN4-205ENST00000493356 PARNO95453 639 aaKnown RBP25.11■■□□□ 1.61
PFDN4-205ENST00000493356 CXCL10P02778 98 aa25.11■■□□□ 1.61
PFDN4-205ENST00000493356 STXBP2Q15833 593 aa25.11■■□□□ 1.61
PFDN4-205ENST00000493356 CNKSR3Q6P9H4 555 aa25.11■■□□□ 1.61
PFDN4-205ENST00000493356 PNMA1Q8ND90 353 aa25.11■■□□□ 1.61
PFDN4-205ENST00000493356 RMDN3Q96TC7 470 aa25.11■■□□□ 1.61
PFDN4-205ENST00000493356 ZBED2Q9BTP6 218 aa25.11■■□□□ 1.61
PFDN4-205ENST00000493356 GTF2IRD1Q9UHL9 959 aa25.11■■□□□ 1.61
PFDN4-205ENST00000493356 LAMA4Q16363 1823 aa25.11■■□□□ 1.61
PFDN4-205ENST00000493356 NBNO60934 754 aa25.1■■□□□ 1.61
PFDN4-205ENST00000493356 CKBP12277 381 aa25.1■■□□□ 1.61
PFDN4-205ENST00000493356 ADGRF4Q8IZF3 695 aa25.1■■□□□ 1.61
PFDN4-205ENST00000493356 GDPD5Q8WTR4 605 aa25.1■■□□□ 1.61
PFDN4-205ENST00000493356 IWS1Q96ST2 819 aa25.1■■□□□ 1.61
PFDN4-205ENST00000493356 HDAC6Q9UBN7 1215 aa25.1■■□□□ 1.61
PFDN4-205ENST00000493356 DGKDQ16760 1214 aa25.09■■□□□ 1.61
PFDN4-205ENST00000493356 TCTN1Q2MV58 587 aa25.09■■□□□ 1.61
PFDN4-205ENST00000493356 MCF2L2Q86YR7 1114 aa25.09■■□□□ 1.61
PFDN4-205ENST00000493356 LMCD1Q9NZU5 365 aa25.09■■□□□ 1.61
PFDN4-205ENST00000493356 DDX41Q9UJV9 622 aaKnown RBP25.09■■□□□ 1.61
PFDN4-205ENST00000493356 GJB5O95377 273 aa25.08■■□□□ 1.61
PFDN4-205ENST00000493356 PSEN2P49810 448 aa25.08■■□□□ 1.61
PFDN4-205ENST00000493356 C7orf31Q8N865 590 aa25.08■■□□□ 1.61
PFDN4-205ENST00000493356 EMID1Q96A84 441 aaPredicted RBP25.08■■□□□ 1.61
PFDN4-205ENST00000493356 LRFN3Q9BTN0 628 aa25.08■■□□□ 1.61
PFDN4-205ENST00000493356 MYH7BA7E2Y1 1941 aa25.08■■□□□ 1.6
PFDN4-205ENST00000493356 SIP14410 1827 aa25.07■■□□□ 1.6
PFDN4-205ENST00000493356 ABHD14A-ACY1A0A1B0GW23 586 aa25.07■■□□□ 1.6
PFDN4-205ENST00000493356 TRIM6-TRIM34B2RNG4 842 aa25.07■■□□□ 1.6
PFDN4-205ENST00000493356 F2P00734 622 aa25.07■■□□□ 1.6
PFDN4-205ENST00000493356 EIF2AK2P19525 551 aaKnown RBP25.07■■□□□ 1.6
PFDN4-205ENST00000493356 QRICH1Q2TAL8 776 aa25.07■■□□□ 1.6
PFDN4-205ENST00000493356 ARHGEF16Q5VV41 709 aa25.07■■□□□ 1.6
PFDN4-205ENST00000493356 IQCA1Q86XH1 822 aa25.07■■□□□ 1.6
PFDN4-205ENST00000493356 RAD9AQ99638 391 aa25.07■■□□□ 1.6
PFDN4-205ENST00000493356 ALG1Q9BT22 464 aa25.07■■□□□ 1.6
PFDN4-205ENST00000493356 KATNAL1Q9BW62 490 aa25.07■■□□□ 1.6
PFDN4-205ENST00000493356 KAT14Q9H8E8 782 aa25.07■■□□□ 1.6
PFDN4-205ENST00000493356 SUGCTQ9HAC7 445 aa25.07■■□□□ 1.6
PFDN4-205ENST00000493356 ZNF213O14771 459 aa25.06■■□□□ 1.6
PFDN4-205ENST00000493356 KDM4AO75164 1064 aa25.06■■□□□ 1.6
PFDN4-205ENST00000493356 EIF3JO75822 258 aaKnown RBP25.06■■□□□ 1.6
PFDN4-205ENST00000493356 NT5C2P49902 561 aa25.06■■□□□ 1.6
PFDN4-205ENST00000493356 MFAP1P55081 439 aaKnown RBP25.06■■□□□ 1.6
PFDN4-205ENST00000493356 ERVK-21P61565 698 aa25.06■■□□□ 1.6
PFDN4-205ENST00000493356 PTK7Q13308 1070 aa25.06■■□□□ 1.6
PFDN4-205ENST00000493356 TRIM71Q2Q1W2 868 aaKnown RBP25.06■■□□□ 1.6
PFDN4-205ENST00000493356 ASPRV1Q53RT3 343 aa25.06■■□□□ 1.6
PFDN4-205ENST00000493356 CCDC178Q5BJE1 867 aa25.06■■□□□ 1.6
PFDN4-205ENST00000493356 FBXO11Q86XK2 927 aa25.06■■□□□ 1.6
PFDN4-205ENST00000493356 ANKS1AQ92625 1134 aa25.06■■□□□ 1.6
PFDN4-205ENST00000493356 RILPL2Q969X0 211 aa25.06■■□□□ 1.6
PFDN4-205ENST00000493356 MTUS1Q9ULD2 1270 aa25.06■■□□□ 1.6
PFDN4-205ENST00000493356 MRPL11Q9Y3B7 192 aaKnown RBP25.06■■□□□ 1.6
PFDN4-205ENST00000493356 MRVI1Q9Y6F6 885 aa25.06■■□□□ 1.6
PFDN4-205ENST00000493356 RBAK-RBAKDNI3L0D1 243 aa25.05■■□□□ 1.6
PFDN4-205ENST00000493356 HAS3O00219 553 aa25.05■■□□□ 1.6
PFDN4-205ENST00000493356 EFCAB14O75071 495 aa25.05■■□□□ 1.6
PFDN4-205ENST00000493356 ZNF286BP0CG31 522 aa25.05■■□□□ 1.6
PFDN4-205ENST00000493356 HDAC1Q13547 482 aaPredicted RBP25.05■■□□□ 1.6
PFDN4-205ENST00000493356 LAMC2Q13753 1193 aa25.05■■□□□ 1.6
PFDN4-205ENST00000493356 MFSD10Q14728 455 aa25.05■■□□□ 1.6
PFDN4-205ENST00000493356 KIAA0753Q2KHM9 967 aa25.05■■□□□ 1.6
PFDN4-205ENST00000493356 TRAF7Q6Q0C0 670 aa25.05■■□□□ 1.6
PFDN4-205ENST00000493356 PPTC7Q8NI37 304 aa25.05■■□□□ 1.6
PFDN4-205ENST00000493356 KHSRPQ92945 711 aaKnown RBP eCLIP25.05■■□□□ 1.6
PFDN4-205ENST00000493356 WNT8BQ93098 351 aa25.05■■□□□ 1.6
PFDN4-205ENST00000493356 TGS1Q96RS0 853 aaKnown RBP25.05■■□□□ 1.6
PFDN4-205ENST00000493356 PXMP2Q9NR77 195 aa25.05■■□□□ 1.6
PFDN4-205ENST00000493356 LINC01553A4QN01 128 aa25.04■■□□□ 1.6
PFDN4-205ENST00000493356 NR3C2P08235 984 aa25.04■■□□□ 1.6
PFDN4-205ENST00000493356 IKBKEQ14164 716 aa25.04■■□□□ 1.6
PFDN4-205ENST00000493356 MBTPS1Q14703 1052 aa25.04■■□□□ 1.6
PFDN4-205ENST00000493356 ZSCAN10Q96SZ4 725 aaPredicted RBP25.04■■□□□ 1.6
PFDN4-205ENST00000493356 JMJD4Q9H9V9 463 aa25.04■■□□□ 1.6
PFDN4-205ENST00000493356 B4E1Z4 1266 aa25.03■■□□□ 1.6
PFDN4-205ENST00000493356 DHX16O60231 1041 aaKnown RBP25.03■■□□□ 1.6
PFDN4-205ENST00000493356 CFBP00751 764 aa25.03■■□□□ 1.6
PFDN4-205ENST00000493356 SDSP20132 328 aa25.03■■□□□ 1.6
PFDN4-205ENST00000493356 RRP1P56182 461 aaKnown RBP25.03■■□□□ 1.6
PFDN4-205ENST00000493356 TMEM31Q5JXX7 168 aa25.03■■□□□ 1.6
PFDN4-205ENST00000493356 ZNF618Q5T7W0 954 aa25.03■■□□□ 1.6
PFDN4-205ENST00000493356 DHX37Q8IY37 1157 aaKnown RBP25.03■■□□□ 1.6
PFDN4-205ENST00000493356 ENAHQ8N8S7 591 aaPredicted RBP25.03■■□□□ 1.6
PFDN4-205ENST00000493356 CRBNQ96SW2 442 aa25.03■■□□□ 1.6
PFDN4-205ENST00000493356 LNPKQ9C0E8 428 aa25.03■■□□□ 1.6
PFDN4-205ENST00000493356 VAT1LQ9HCJ6 419 aa25.03■■□□□ 1.6
PFDN4-205ENST00000493356 OPLAHO14841 1288 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms