RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 ARHGAP1Q07960 439 aa12.87□□□□□ -0.35
SNRNP200-207ENST00000493271 PTK7Q13308 1070 aa12.87□□□□□ -0.35
SNRNP200-207ENST00000493271 LAMC2Q13753 1193 aa12.87□□□□□ -0.35
SNRNP200-207ENST00000493271 GDF6Q6KF10 455 aaPredicted RBP12.87□□□□□ -0.35
SNRNP200-207ENST00000493271 OTUD7AQ8TE49 926 aaPredicted RBP12.87□□□□□ -0.35
SNRNP200-207ENST00000493271 EPHX3Q9H6B9 360 aa12.87□□□□□ -0.35
SNRNP200-207ENST00000493271 CTNNA3Q9UI47 895 aa12.87□□□□□ -0.35
SNRNP200-207ENST00000493271 F2P00734 622 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 CHMP4BP1P59074 171 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 PUS10Q3MIT2 529 aaKnown RBP12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 USH1GQ495M9 461 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 ASPRV1Q53RT3 343 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 KRT40Q6A162 431 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 KCNV1Q6PIU1 500 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 SEPT14Q6ZU15 432 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 IQCA1Q86XH1 822 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 PPTC7Q8NI37 304 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 SYTL5Q8TDW5 730 aaPredicted RBP12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 KAT2BQ92831 832 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 SAMD11Q96NU1 681 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 CTAGE1Q96RT6 745 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 RMDN3Q96TC7 470 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 SUGCTQ9HAC7 445 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 MAP3K20Q9NYL2 800 aaKnown RBP12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 MRPL11Q9Y3B7 192 aaKnown RBP12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 INSL6Q9Y581 213 aa12.86□□□□□ -0.35
SNRNP200-207ENST00000493271 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 LCHNA4D1U4 455 aa12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 PI4K2BG5E9Z4 385 aa12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 NBNO60934 754 aa12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 PSEN2P49810 448 aa12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 GPNMBQ14956 572 aa12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 CDC37Q16543 378 aaPredicted RBP12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 LY6KQ17RY6 165 aa12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 LEXMQ3ZCV2 418 aa12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 ARHGEF16Q5VV41 709 aa12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 SAMD3Q8N6K7 520 aa12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 PNMA1Q8ND90 353 aa12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 DHX38Q92620 1227 aaKnown RBP12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 UBE2ZQ9H832 354 aaPredicted RBP12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 DDX41Q9UJV9 622 aaKnown RBP12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 PCDHB15Q9Y5E8 787 aa12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 MRVI1Q9Y6F6 885 aa12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 COL4A4P53420 1690 aaPredicted RBP12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 CCDC171Q6TFL3 1326 aa12.85□□□□□ -0.35
SNRNP200-207ENST00000493271 A0A0D9SFI3 127 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 LINC01553A4QN01 128 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 HAS3O00219 553 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 ZNF213O14771 459 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 PPFIA4O75335 1185 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 LGR5O75473 907 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 HOXD8P13378 290 aaPredicted RBP12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 PDE1AP54750 535 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 DEFB103AP81534 67 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 GHRHRQ02643 423 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 TRAF1Q13077 416 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 MFSD10Q14728 455 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 PTPROQ16827 1216 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 TET1Q8NFU7 2136 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 GDPD5Q8WTR4 605 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 ANKS1AQ92625 1134 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 FAM227BQ96M60 508 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 TAAR1Q96RJ0 339 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 KAT14Q9H8E8 782 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 HDAC6Q9UBN7 1215 aa12.84□□□□□ -0.35
SNRNP200-207ENST00000493271 PRR33A8MZF0 331 aa12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 CAND2O75155 1236 aa12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 AMHP03971 560 aa12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 ALADP13716 330 aa12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 HAND2P61296 217 aa12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 KIAA0753Q2KHM9 967 aa12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 ANKRD45Q5TZF3 282 aa12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 CHST3Q7LGC8 479 aa12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 FBXO11Q86XK2 927 aa12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 DHX37Q8IY37 1157 aaKnown RBP12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 ADGRF4Q8IZF3 695 aa12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 GJD3Q8N144 294 aa12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 PPP1R13LQ8WUF5 828 aa12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 UBA5Q9GZZ9 404 aa12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 PXMP2Q9NR77 195 aa12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 FAM50BQ9Y247 325 aa12.83□□□□□ -0.36
SNRNP200-207ENST00000493271 PTPRSQ13332 1948 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 KIAA1217Q5T5P2 1943 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 TRIP12Q14669 1992 aaPredicted RBP12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 NR3C2P08235 984 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 PARP1P09874 1014 aaKnown RBP12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 GOLGA8HP0CJ92 632 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 TGFB3P10600 412 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 HTRA4P83105 476 aaPredicted RBP12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 TRIM71Q2Q1W2 868 aaKnown RBP12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 QRICH1Q2TAL8 776 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 TIGD5Q53EQ6 642 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 ZNF618Q5T7W0 954 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 ZNF589Q86UQ0 364 aaPredicted RBP12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 TBC1D10CQ8IV04 446 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 FAM178BQ8IXR5 827 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 FBXO22Q8NEZ5 403 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 ALG1Q9BT22 464 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms