RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 MTUS1Q9ULD2 1270 aa16.05■□□□□ 0.16
SAMM50-204ENST00000493161 CKBP12277 381 aa16.04■□□□□ 0.16
SAMM50-204ENST00000493161 ZNF200P98182 395 aaPredicted RBP16.04■□□□□ 0.16
SAMM50-204ENST00000493161 GPATCH4Q5T3I0 446 aaKnown RBP16.04■□□□□ 0.16
SAMM50-204ENST00000493161 TRAF7Q6Q0C0 670 aa16.04■□□□□ 0.16
SAMM50-204ENST00000493161 ADGRF4Q8IZF3 695 aa16.04■□□□□ 0.16
SAMM50-204ENST00000493161 CAGE1Q8TC20 777 aa16.04■□□□□ 0.16
SAMM50-204ENST00000493161 NSUN6Q8TEA1 469 aaKnown RBP16.04■□□□□ 0.16
SAMM50-204ENST00000493161 FAM122AQ96E09 287 aa16.04■□□□□ 0.16
SAMM50-204ENST00000493161 ALG1Q9BT22 464 aa16.04■□□□□ 0.16
SAMM50-204ENST00000493161 LRFN3Q9BTN0 628 aa16.04■□□□□ 0.16
SAMM50-204ENST00000493161 B4DLN1 442 aa16.03■□□□□ 0.16
SAMM50-204ENST00000493161 CXCL10P02778 98 aa16.03■□□□□ 0.16
SAMM50-204ENST00000493161 EIF2AK2P19525 551 aaKnown RBP16.03■□□□□ 0.16
SAMM50-204ENST00000493161 MRPL12P52815 198 aaKnown RBP16.03■□□□□ 0.16
SAMM50-204ENST00000493161 HIC1Q14526 733 aa16.03■□□□□ 0.16
SAMM50-204ENST00000493161 STXBP2Q15833 593 aa16.03■□□□□ 0.16
SAMM50-204ENST00000493161 QRICH1Q2TAL8 776 aa16.03■□□□□ 0.16
SAMM50-204ENST00000493161 FAM117BQ6P1L5 589 aa16.03■□□□□ 0.16
SAMM50-204ENST00000493161 DGKHQ86XP1 1220 aa16.03■□□□□ 0.16
SAMM50-204ENST00000493161 CCDC155Q8N6L0 562 aa16.03■□□□□ 0.16
SAMM50-204ENST00000493161 PNMA1Q8ND90 353 aa16.03■□□□□ 0.16
SAMM50-204ENST00000493161 RMDN3Q96TC7 470 aa16.03■□□□□ 0.16
SAMM50-204ENST00000493161 ZBED2Q9BTP6 218 aa16.03■□□□□ 0.16
SAMM50-204ENST00000493161 CD320Q9NPF0 282 aa16.03■□□□□ 0.16
SAMM50-204ENST00000493161 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
SAMM50-204ENST00000493161 GTF2IRD1Q9UHL9 959 aa16.03■□□□□ 0.16
SAMM50-204ENST00000493161 DDX41Q9UJV9 622 aaKnown RBP16.03■□□□□ 0.16
SAMM50-204ENST00000493161 ABCB11O95342 1321 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 TRIM6-TRIM34B2RNG4 842 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 SORBS3O60504 671 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 KDM4AO75164 1064 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 ZNF286BP0CG31 522 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 CASTP20810 708 aaKnown RBP16.02■□□□□ 0.16
SAMM50-204ENST00000493161 PSEN2P49810 448 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 RBL2Q08999 1139 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 MBTPS1Q14703 1052 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 TRIM71Q2Q1W2 868 aaKnown RBP16.02■□□□□ 0.16
SAMM50-204ENST00000493161 CNKSR3Q6P9H4 555 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 C7orf31Q8N865 590 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 ESR2Q92731 530 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 RILPL2Q969X0 211 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 CRBNQ96SW2 442 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 SUGCTQ9HAC7 445 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 VAT1LQ9HCJ6 419 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 C11orf16Q9NQ32 467 aa16.02■□□□□ 0.16
SAMM50-204ENST00000493161 LINC01553A4QN01 128 aa16.01■□□□□ 0.15
SAMM50-204ENST00000493161 OPLAHO14841 1288 aa16.01■□□□□ 0.15
SAMM50-204ENST00000493161 GJB5O95377 273 aa16.01■□□□□ 0.15
SAMM50-204ENST00000493161 PCP11498 1178 aaKnown RBP16.01■□□□□ 0.15
SAMM50-204ENST00000493161 SDSP20132 328 aa16.01■□□□□ 0.15
SAMM50-204ENST00000493161 MFSD10Q14728 455 aa16.01■□□□□ 0.15
SAMM50-204ENST00000493161 DGKDQ16760 1214 aa16.01■□□□□ 0.15
SAMM50-204ENST00000493161 ZNF618Q5T7W0 954 aa16.01■□□□□ 0.15
SAMM50-204ENST00000493161 ARHGEF16Q5VV41 709 aa16.01■□□□□ 0.15
SAMM50-204ENST00000493161 IWS1Q96ST2 819 aa16.01■□□□□ 0.15
SAMM50-204ENST00000493161 LNPKQ9C0E8 428 aa16.01■□□□□ 0.15
SAMM50-204ENST00000493161 RNF41Q9H4P4 317 aaPredicted RBP16.01■□□□□ 0.15
SAMM50-204ENST00000493161 KAT14Q9H8E8 782 aa16.01■□□□□ 0.15
SAMM50-204ENST00000493161 JMJD4Q9H9V9 463 aa16.01■□□□□ 0.15
SAMM50-204ENST00000493161 KIAA1217Q5T5P2 1943 aa16.01■□□□□ 0.15
SAMM50-204ENST00000493161 FAM86C2PA6NEL3 165 aa16■□□□□ 0.15
SAMM50-204ENST00000493161 B4E1Z4 1266 aa16■□□□□ 0.15
SAMM50-204ENST00000493161 HAS3O00219 553 aa16■□□□□ 0.15
SAMM50-204ENST00000493161 ZNF213O14771 459 aa16■□□□□ 0.15
SAMM50-204ENST00000493161 RGS20O76081 388 aa16■□□□□ 0.15
SAMM50-204ENST00000493161 NR3C2P08235 984 aa16■□□□□ 0.15
SAMM50-204ENST00000493161 ERVK-21P61565 698 aa16■□□□□ 0.15
SAMM50-204ENST00000493161 KIAA0753Q2KHM9 967 aa16■□□□□ 0.15
SAMM50-204ENST00000493161 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16■□□□□ 0.15
SAMM50-204ENST00000493161 FBXO11Q86XK2 927 aa16■□□□□ 0.15
SAMM50-204ENST00000493161 ENAHQ8N8S7 591 aaPredicted RBP16■□□□□ 0.15
SAMM50-204ENST00000493161 ANKS1AQ92625 1134 aa16■□□□□ 0.15
SAMM50-204ENST00000493161 RAD9AQ99638 391 aa16■□□□□ 0.15
SAMM50-204ENST00000493161 PXMP2Q9NR77 195 aa16■□□□□ 0.15
SAMM50-204ENST00000493161 ABHD14A-ACY1A0A1B0GW23 586 aa15.99■□□□□ 0.15
SAMM50-204ENST00000493161 PPP1R11O60927 126 aaPredicted RBP15.99■□□□□ 0.15
SAMM50-204ENST00000493161 EIF3JO75822 258 aaKnown RBP15.99■□□□□ 0.15
SAMM50-204ENST00000493161 F2P00734 622 aa15.99■□□□□ 0.15
SAMM50-204ENST00000493161 CFBP00751 764 aa15.99■□□□□ 0.15
SAMM50-204ENST00000493161 RRP1P56182 461 aaKnown RBP15.99■□□□□ 0.15
SAMM50-204ENST00000493161 PTK7Q13308 1070 aa15.99■□□□□ 0.15
SAMM50-204ENST00000493161 HDAC1Q13547 482 aaPredicted RBP15.99■□□□□ 0.15
SAMM50-204ENST00000493161 MCF2L2Q86YR7 1114 aa15.99■□□□□ 0.15
SAMM50-204ENST00000493161 STAG2Q8N3U4 1231 aa15.99■□□□□ 0.15
SAMM50-204ENST00000493161 PPTC7Q8NI37 304 aa15.99■□□□□ 0.15
SAMM50-204ENST00000493161 EMID1Q96A84 441 aaPredicted RBP15.99■□□□□ 0.15
SAMM50-204ENST00000493161 ZFP91Q96JP5 570 aaPredicted RBP15.99■□□□□ 0.15
SAMM50-204ENST00000493161 TGS1Q96RS0 853 aaKnown RBP15.99■□□□□ 0.15
SAMM50-204ENST00000493161 ZSCAN10Q96SZ4 725 aaPredicted RBP15.99■□□□□ 0.15
SAMM50-204ENST00000493161 ZSWIM5Q9P217 1185 aa15.99■□□□□ 0.15
SAMM50-204ENST00000493161 MRPL11Q9Y3B7 192 aaKnown RBP15.99■□□□□ 0.15
SAMM50-204ENST00000493161 MRVI1Q9Y6F6 885 aa15.99■□□□□ 0.15
SAMM50-204ENST00000493161 DHX16O60231 1041 aaKnown RBP15.98■□□□□ 0.15
SAMM50-204ENST00000493161 SP2Q02086 613 aa15.98■□□□□ 0.15
SAMM50-204ENST00000493161 LAMC2Q13753 1193 aa15.98■□□□□ 0.15
SAMM50-204ENST00000493161 IKBKEQ14164 716 aa15.98■□□□□ 0.15
SAMM50-204ENST00000493161 ASPRV1Q53RT3 343 aa15.98■□□□□ 0.15
SAMM50-204ENST00000493161 TMEM31Q5JXX7 168 aa15.98■□□□□ 0.15
SAMM50-204ENST00000493161 IQCA1Q86XH1 822 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms