RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SCYL3Q8IZE3 742 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 ETNPPLQ8TBG4 499 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 TRPM4Q8TD43 1214 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 CACTINQ8WUQ7 758 aaKnown RBP15.75■□□□□ 0.11
PTPN7-216ENST00000492977 LARP4BQ92615 738 aaKnown RBP15.75■□□□□ 0.11
PTPN7-216ENST00000492977 FHDC1Q9C0D6 1143 aaPredicted RBP15.75■□□□□ 0.11
PTPN7-216ENST00000492977 NT5C3AQ9H0P0 336 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 AS3MTQ9HBK9 375 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 BLOC1S4Q9NUP1 217 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 PNMA2Q9UL42 364 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 DOCK1Q14185 1865 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 CFBP00751 764 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 PPP1R2P41236 205 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 STIM1Q13586 685 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 PRR16Q569H4 304 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 CDKAL1Q5VV42 579 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 TMC6Q7Z403 805 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 ADSSL1Q8N142 457 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 GIMAP8Q8ND71 665 aaPredicted RBP15.75■□□□□ 0.11
PTPN7-216ENST00000492977 RAD54LQ92698 747 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 LENG9Q96B70 501 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 SAMSN1Q9NSI8 373 aaKnown RBP15.75■□□□□ 0.11
PTPN7-216ENST00000492977 CTNND2Q9UQB3 1225 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 PVALEFA0A1B0GWK0 134 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 FDX1P10109 184 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 TAL1P17542 331 aaPredicted RBP15.74■□□□□ 0.11
PTPN7-216ENST00000492977 ZNF76P36508 570 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 EPS15P42566 896 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 PRCPP42785 496 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 STX17P56962 302 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 ASIC1P78348 528 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 NOLC1Q14978 699 aaKnown RBP eCLIP15.74■□□□□ 0.11
PTPN7-216ENST00000492977 TPD52L1Q16890 204 aaPredicted RBP15.74■□□□□ 0.11
PTPN7-216ENST00000492977 FCHSD1Q86WN1 690 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 CCDC150Q8NCX0 1101 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 NELFBQ8WX92 580 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 NAP1L5Q96NT1 182 aaPredicted RBP15.74■□□□□ 0.11
PTPN7-216ENST00000492977 CTAGE1Q96RT6 745 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 NUDT12Q9BQG2 462 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 PICK1Q9NRD5 415 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 SPTLC3Q9NUV7 552 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 EXOC1Q9NV70 894 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 GGA3Q9NZ52 723 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 PYCARDQ9ULZ3 195 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 GDAQ9Y2T3 454 aa15.74■□□□□ 0.11
PTPN7-216ENST00000492977 FAM86B1E9PN63 330 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 OFD1O75665 1012 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 FAM86B2P0C5J1 330 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 CCT6AP40227 531 aaKnown RBP15.73■□□□□ 0.11
PTPN7-216ENST00000492977 HIRAP54198 1017 aaPredicted RBP15.73■□□□□ 0.11
PTPN7-216ENST00000492977 LRMPQ12912 555 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 MTMR2Q13614 643 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 MCM6Q14566 821 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 SUPT20HL1Q3ZLR7 823 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 COBLL1Q53SF7 1204 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 VSTM4Q8IW00 320 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 SAMD3Q8N6K7 520 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 WRNIP1Q96S55 665 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 EMILIN3Q9NT22 766 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 CCPG1Q9ULG6 757 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 RABGAP1Q9Y3P9 1069 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 ZNF536O15090 1300 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 PITPNM2Q9BZ72 1349 aa15.73■□□□□ 0.11
PTPN7-216ENST00000492977 PTPRAP18433 802 aa15.72■□□□□ 0.11
PTPN7-216ENST00000492977 VCAM1P19320 739 aa15.72■□□□□ 0.11
PTPN7-216ENST00000492977 BACE1P56817 501 aa15.72■□□□□ 0.11
PTPN7-216ENST00000492977 SPAG1Q07617 926 aa15.72■□□□□ 0.11
PTPN7-216ENST00000492977 PDE4DQ08499 809 aa15.72■□□□□ 0.11
PTPN7-216ENST00000492977 HAUS3Q68CZ6 603 aa15.72■□□□□ 0.11
PTPN7-216ENST00000492977 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.72■□□□□ 0.11
PTPN7-216ENST00000492977 MCF2L2Q86YR7 1114 aa15.72■□□□□ 0.11
PTPN7-216ENST00000492977 ZNF280CQ8ND82 737 aa15.72■□□□□ 0.11
PTPN7-216ENST00000492977 ERMNQ8TAM6 284 aa15.72■□□□□ 0.11
PTPN7-216ENST00000492977 TBC1D5Q92609 795 aa15.72■□□□□ 0.11
PTPN7-216ENST00000492977 GJA10Q969M2 543 aa15.72■□□□□ 0.11
PTPN7-216ENST00000492977 DHTKD1Q96HY7 919 aaPredicted RBP15.72■□□□□ 0.11
PTPN7-216ENST00000492977 TANGO6Q9C0B7 1094 aa15.72■□□□□ 0.11
PTPN7-216ENST00000492977 SLC38A10Q9HBR0 1119 aa15.72■□□□□ 0.11
PTPN7-216ENST00000492977 PPP1R9AQ9ULJ8 1098 aa15.72■□□□□ 0.11
PTPN7-216ENST00000492977 A0A1B0GTH6 734 aa15.71■□□□□ 0.11
PTPN7-216ENST00000492977 MYMKA6NI61 221 aa15.71■□□□□ 0.11
PTPN7-216ENST00000492977 C19orf81C9J6K1 198 aa15.71■□□□□ 0.11
PTPN7-216ENST00000492977 PSMA7O14818 248 aa15.71■□□□□ 0.11
PTPN7-216ENST00000492977 MSH4O15457 936 aa15.71■□□□□ 0.11
PTPN7-216ENST00000492977 HSD17B4P51659 736 aa15.71■□□□□ 0.11
PTPN7-216ENST00000492977 GHRHRQ02643 423 aa15.71■□□□□ 0.11
PTPN7-216ENST00000492977 SPIRE1Q08AE8 756 aa15.71■□□□□ 0.11
PTPN7-216ENST00000492977 SPP2Q13103 211 aa15.71■□□□□ 0.11
PTPN7-216ENST00000492977 NR1I3Q14994 352 aa15.71■□□□□ 0.11
PTPN7-216ENST00000492977 HSP90AA4PQ58FG1 418 aa15.71■□□□□ 0.11
PTPN7-216ENST00000492977 UNC13DQ70J99 1090 aa15.71■□□□□ 0.11
PTPN7-216ENST00000492977 KLRG1Q96E93 195 aa15.71■□□□□ 0.11
PTPN7-216ENST00000492977 AGBL1Q96MI9 1066 aa15.71■□□□□ 0.11
PTPN7-216ENST00000492977 INTS13Q9NVM9 706 aa15.71■□□□□ 0.11
PTPN7-216ENST00000492977 MAP3K20Q9NYL2 800 aaKnown RBP15.71■□□□□ 0.11
PTPN7-216ENST00000492977 IGLV3-22A0A075B6J6 115 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 LRRC10BA6NIK2 292 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 FLOT1O75955 427 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 ECM1Q16610 540 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 NOL9Q5SY16 702 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms