RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 LTBP1Q14766 1721 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 A0A087WZG4 1122 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 JMJD7P0C870 316 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 CD247P20963 164 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 USP53Q70EK8 1073 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 NECAB2Q7Z6G3 386 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 SPATS2Q86XZ4 545 aaKnown RBP3.92□□□□□ -1.78
SNX13-209ENST00000492626 TMEM192Q8IY95 271 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 PTPRN2Q92932 1015 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 NOL6Q9H6R4 1146 aaKnown RBP3.92□□□□□ -1.78
SNX13-209ENST00000492626 SPATA31A3Q5VYP0 1347 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 DNAJA2O60884 412 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 PEX14O75381 377 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 U2AF1L5P0DN76 240 aaPredicted RBP3.92□□□□□ -1.78
SNX13-209ENST00000492626 PYGMP11217 842 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 HOXC12P31275 282 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 NOP2P46087 812 aaKnown RBP3.92□□□□□ -1.78
SNX13-209ENST00000492626 IL2P60568 153 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 U2AF1Q01081 240 aaKnown RBP eCLIP3.92□□□□□ -1.78
SNX13-209ENST00000492626 TTF1Q15361 905 aaPredicted RBP3.92□□□□□ -1.78
SNX13-209ENST00000492626 FAM47CQ5HY64 1035 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 LETMD1Q6P1Q0 360 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 BTN2A2Q8WVV5 523 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 RELTQ969Z4 430 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 GP6Q9HCN6 339 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 DISC1Q9NRI5 854 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 APOBEC2Q9Y235 224 aaKnown RBP3.92□□□□□ -1.78
SNX13-209ENST00000492626 STARD13Q9Y3M8 1113 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 GSG1L2A8MUP6 293 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 GSTA4O15217 222 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 BCRP11274 1271 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 GRIK5Q16478 980 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 ANKRD39Q53RE8 183 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 C20orf204Q6ZNR8 217 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 SMG8Q8ND04 991 aaKnown RBP3.92□□□□□ -1.78
SNX13-209ENST00000492626 FLAD1Q8NFF5 587 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 IRF7Q92985 503 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 BRF1Q92994 677 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 ISL2Q96A47 359 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 RCC1LQ96I51 464 aaKnown RBP3.92□□□□□ -1.78
SNX13-209ENST00000492626 IFT22Q9H7X7 185 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 PPP1R9AQ9ULJ8 1098 aa3.92□□□□□ -1.78
SNX13-209ENST00000492626 KDM6AO15550 1401 aaPredicted RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 E2F8A0AVK6 867 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 CTSBP07858 339 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 MAP4K2Q12851 820 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 BIRC2Q13490 618 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 GAS6Q14393 721 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 EZH2Q15910 746 aaKnown RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 DDX1Q92499 740 aaKnown RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 NRSN2Q9GZP1 204 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 PRDM6Q9NQX0 595 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 NOP53Q9NZM5 478 aaKnown RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 GABBR1Q9UBS5 961 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 CEP131Q9UPN4 1083 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 DLEC1Q9Y238 1755 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 CCDC194A0A1B0GVG4 234 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 OIP5O43482 229 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 MYO1BO43795 1136 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 UBOX5O94941 541 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 GLB1P16278 677 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 SEPHS1P49903 392 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 TMPRSS15P98073 1019 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 FAPQ12884 760 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 PKN2Q16513 984 aaKnown RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 FOXD4L6Q3SYB3 417 aaPredicted RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 FOXD4L3Q6VB84 417 aaPredicted RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 PODNQ7Z5L7 613 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 ZC3H7AQ8IWR0 971 aaKnown RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 TRIM59Q8IWR1 403 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 GALNT11Q8NCW6 608 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 KREMEN1Q96MU8 473 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 PUS7LQ9H0K6 701 aaKnown RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 KCNH6Q9H252 994 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 APEX2Q9UBZ4 518 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 CGGBP1Q9UFW8 167 aaPredicted RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 SPEF1Q9Y4P9 236 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 A0A087X0B3 334 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 C9IYK1 514 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 CAP2P40123 477 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 CDKN1CP49918 316 aaPredicted RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 GRB10Q13322 594 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 HLTFQ14527 1009 aaKnown RBP eCLIP3.91□□□□□ -1.78
SNX13-209ENST00000492626 DPY19L1Q2PZI1 675 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 YOD1Q5VVQ6 348 aaPredicted RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 FOXB2Q5VYV0 432 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 GTF2IRD2BQ6EKJ0 949 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 CCSAPQ6IQ19 270 aaPredicted RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 CDH24Q86UP0 819 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 GTF2IRD2Q86UP8 949 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 CERS3Q8IU89 383 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 CHPFQ8IZ52 775 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 PI4K2BQ8TCG2 481 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 DCAF4Q8WV16 495 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 RNF141Q8WVD5 230 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 KISS1RQ969F8 398 aaPredicted RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 SYTL4Q96C24 671 aaPredicted RBP3.91□□□□□ -1.78
SNX13-209ENST00000492626 COX4I2Q96KJ9 171 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 C8orf48Q96LL4 319 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms