RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 LAMA2P24043 3122 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 LAMA3Q16787 3333 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 TRIM43BA6NCK2 446 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 B4DLN1 442 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 NKRFO15226 690 aaKnown RBP eCLIP8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 PRPF3O43395 683 aaKnown RBP8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 MYCLP12524 364 aaPredicted RBP8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 ITGB8P26012 769 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 MRPL12P52815 198 aaKnown RBP8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 CCT2P78371 535 aaKnown RBP8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 SP2Q02086 613 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 TLE2Q04725 743 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 ARHGAP1Q07960 439 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 PFKFB3Q16875 520 aaPredicted RBP8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 CXCL17Q6UXB2 119 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 SH3RF1Q7Z6J0 888 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 SLC43A3Q8NBI5 491 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 PCSK9Q8NBP7 692 aaKnown RBP8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 PHKBQ93100 1093 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 TRIM43Q96BQ3 446 aaPredicted RBP8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 ZNF274Q96GC6 653 aaPredicted RBP8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 MPHOSPH6Q99547 160 aaKnown RBP8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 GDF15Q99988 308 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 AP5M1Q9H0R1 490 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 SPC25Q9HBM1 224 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 STARD7Q9NQZ5 370 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 BARHL2Q9NY43 387 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 TPCN1Q9ULQ1 816 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 ATP11BQ9Y2G3 1177 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 ELP1O95163 1332 aa8.28□□□□□ -1.08
PDLIM1-204ENST00000492511 ALPK3Q96L96 1907 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 BAZ2BQ9UIF8 2168 aaKnown RBP8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 CCDC196A0A1B0GTZ2 297 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 A6NJR5 290 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 ARVCFO00192 962 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 DTNBO60941 627 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 IFNAR1P17181 557 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 CCND2P30279 289 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 CLK2P49760 499 aaKnown RBP8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 PSMC6P62333 389 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 FAAP100Q0VG06 881 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 TTLL4Q14679 1199 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 ANKRD33Q7Z3H0 272 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 OR6J1Q8NGC5 347 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 SMARCC2Q8TAQ2 1214 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 AFG1LQ8WV93 481 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 INPP4AQ96PE3 977 aaPredicted RBP8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 KIF2CQ99661 725 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 RIC8AQ9NPQ8 531 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 PDLIM7Q9NR12 457 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 RTEL1Q9NZ71 1219 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 PCDHA6Q9UN73 950 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 TELO2Q9Y4R8 837 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 PCDHA8Q9Y5H6 950 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 MCM3APO60318 1980 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 CUL9Q8IWT3 2517 aa8.27□□□□□ -1.09
PDLIM1-204ENST00000492511 SMCO2A6NFE2 343 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 SPATA31C2B4DYI2 1134 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 LARGE1O95461 756 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 GH1P01241 217 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 SCG2P13521 617 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 ICAM3P32942 547 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 MAGEA10P43363 369 aaPredicted RBP8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 AK2P54819 239 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 NAPAP54920 295 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 PURAQ00577 322 aaKnown RBP8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 SCRN1Q12765 414 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 STK3Q13188 491 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 ITGA7Q13683 1181 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 MYSM1Q5VVJ2 828 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 PCNX4Q63HM2 1172 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 PPP1R18Q6NYC8 613 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 PPP1R13LQ8WUF5 828 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 CUL5Q93034 780 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 EMID1Q96A84 441 aaPredicted RBP8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 PGBD1Q96JS3 809 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 GLT1D1Q96MS3 346 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 TOX2Q96NM4 488 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 SLC26A6Q9BXS9 759 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 TMEM260Q9NX78 707 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 MRVI1Q9Y6F6 885 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 SZT2Q5T011 3432 aa8.26□□□□□ -1.09
PDLIM1-204ENST00000492511 A0A0U1RQG5 324 aaPredicted RBP8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 hCG_1984214I3L0E3 225 aa8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 KIAA0355O15063 1070 aa8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 EDIL3O43854 480 aa8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 ZEB2O60315 1214 aa8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 SORBS3O60504 671 aa8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 PFKFB2O60825 505 aa8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 PQBP1O60828 265 aaKnown RBP8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 ATP9AO75110 1047 aa8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 STAM2O75886 525 aa8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 CABYRO75952 493 aa8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 CTDNEP1O95476 244 aa8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 CD4P01730 458 aa8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 MMP3P08254 477 aa8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 MYL3P08590 195 aa8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 CLTBP09497 229 aa8.25□□□□□ -1.09
PDLIM1-204ENST00000492511 TGFB3P10600 412 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms