RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SOGA3Q5TF21 947 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 DCAF15Q66K64 600 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 KIAA1211LQ6NV74 962 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 GIMAP6Q6P9H5 292 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 LIMS2Q7Z4I7 341 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 TMEM52Q8NDY8 209 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 TRIM55Q9BYV6 548 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 KLHL25Q9H0H3 589 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 DEF6Q9H4E7 631 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 FAM86C1Q9NVL1 165 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 PRR13Q9NZ81 148 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 C11orf21Q9P2W6 132 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 CDK11AQ9UQ88 783 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 MROH6A6NGR9 719 aa4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 TP53P04637 393 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 SLC7A5Q01650 507 aa4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 KLF10Q13118 480 aa4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 SLC9A5Q14940 896 aa4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 GNPTABQ3T906 1256 aa4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 PLEKHH3Q7Z736 793 aa4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 CPA5Q8WXQ8 436 aa4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 TSPAN17Q96FV3 270 aa4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 DHRS1Q96LJ7 313 aa4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 DEPDC7Q96QD5 511 aa4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 HAUS7Q99871 368 aa4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 CCDC113Q9H0I3 377 aa4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 ZSWIM4Q9H7M6 989 aa4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 PCDH18Q9HCL0 1135 aa4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 SPATA6Q9NWH7 488 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P30-201ENST00000492455 SUSD5O60279 629 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 DDAH1O94760 285 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 TBC1D8O95759 1140 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 CAPNS1P04632 268 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 EPHX1P07099 455 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 CYP2C8P10632 490 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 CEBPAP49715 358 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 CACNB2Q08289 660 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 SMAD4Q13485 552 aaKnown RBP4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 AUHQ13825 339 aaKnown RBP4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 RASGRF1Q13972 1273 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 NCAPHQ15003 741 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 SLC10A6Q3KNW5 377 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 ANKRD39Q53RE8 183 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 RTP2Q5QGT7 225 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 SPATC1Q76KD6 591 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 LRP10Q7Z4F1 713 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 PEX11GQ96HA9 241 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 NOX5Q96PH1 765 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 ZNF341Q9BYN7 854 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 KANSL2Q9H9L4 492 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 APEX2Q9UBZ4 518 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 R3HCC1Q9Y3T6 440 aaKnown RBP4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 TCAF1Q9Y4C2 921 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 ZNF451Q9Y4E5 1061 aa4.45□□□□□ -1.7
HMGB1P30-201ENST00000492455 NPEPPSL1A6NEC2 478 aa4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 CCDC85CA6NKD9 419 aa4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 PDPK1O15530 556 aa4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 LAMTOR5O43504 91 aa4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 DIAPH1O60610 1272 aaKnown RBP4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 L1CAMP32004 1257 aa4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 NOP2P46087 812 aaKnown RBP4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 CDSNQ15517 529 aa4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 SMN1Q16637 294 aaKnown RBP4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 JAZF1Q86VZ6 243 aa4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 PALM2Q8IXS6 379 aa4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 CCDC144CPQ8IYA2 1237 aa4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 C7orf61Q8IZ16 206 aa4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 LILRB2Q8N423 598 aa4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 SMARCC1Q92922 1105 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 SRPK1Q96SB4 655 aaKnown RBP4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 LGR4Q9BXB1 951 aa4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 SLC12A9Q9BXP2 914 aa4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 TBX22Q9Y458 520 aa4.44□□□□□ -1.7
HMGB1P30-201ENST00000492455 U2SURPO15042 1029 aaKnown RBP4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 ZBTB7AO95365 584 aa4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 CD247P20963 164 aa4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 RPL13P26373 211 aaKnown RBP4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 INHBEP58166 350 aa4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 ZNF445P59923 1031 aa4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 FHL2Q14192 279 aa4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 ZNF585AQ6P3V2 769 aa4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 CIR1Q86X95 450 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 JMYQ8N9B5 988 aa4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 ST13P5Q8NFI4 369 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 FGD4Q96M96 766 aa4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 DNAJC7Q99615 494 aa4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 SSBP3Q9BWW4 388 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 SEMA4AQ9H3S1 761 aa4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 BCAS3Q9H6U6 928 aa4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 GP6Q9HCN6 339 aa4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 WDR33Q9C0J8 1336 aaKnown RBP4.43□□□□□ -1.7
HMGB1P30-201ENST00000492455 MUSKO15146 869 aa4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 FGF10O15520 208 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 TBX1O43435 398 aa4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 ADCY3O60266 1144 aa4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 GLI4P10075 376 aa4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 SELENOPP49908 381 aa4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 ZNF143P52747 638 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 RBM10P98175 930 aaKnown RBP4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 PURAQ00577 322 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms