RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 PRDM4Q9UKN5 801 aa13.88□□□□□ -0.19
HMGN1-220ENST00000492280 RRP1BQ14684 758 aaKnown RBP13.88□□□□□ -0.19
HMGN1-220ENST00000492280 C2CD5Q86YS7 1000 aa13.88□□□□□ -0.19
HMGN1-220ENST00000492280 GOLGA1Q92805 767 aa13.88□□□□□ -0.19
HMGN1-220ENST00000492280 CCDC51Q96ER9 411 aa13.88□□□□□ -0.19
HMGN1-220ENST00000492280 DHTKD1Q96HY7 919 aaPredicted RBP13.88□□□□□ -0.19
HMGN1-220ENST00000492280 TTYH3Q9C0H2 523 aa13.88□□□□□ -0.19
HMGN1-220ENST00000492280 ZCCHC17Q9NP64 241 aaKnown RBP13.88□□□□□ -0.19
HMGN1-220ENST00000492280 KIAA1024Q9UPX6 916 aa13.88□□□□□ -0.19
HMGN1-220ENST00000492280 POTEFA5A3E0 1075 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 ATP1A1P05023 1023 aaKnown RBP13.87□□□□□ -0.19
HMGN1-220ENST00000492280 POTEIP0CG38 1075 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 FECHP22830 423 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 ENOX2Q16206 610 aaKnown RBP13.87□□□□□ -0.19
HMGN1-220ENST00000492280 CERKLQ49MI3 558 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-220ENST00000492280 CCDC122Q5T0U0 273 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 SLFN13Q68D06 897 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 CC2D1AQ6P1N0 951 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-220ENST00000492280 CNNM4Q6P4Q7 775 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 POTEGQ6S5H5 508 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 POTEEQ6S8J3 1075 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 CCDC47Q96A33 483 aaKnown RBP13.87□□□□□ -0.19
HMGN1-220ENST00000492280 CRACR2AQ9BSW2 395 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 TANGO6Q9C0B7 1094 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 MMRN2Q9H8L6 949 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 CDC23Q9UJX2 597 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 ZBTB22O15209 634 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 ZRANB2O95218 330 aaKnown RBP eCLIP13.87□□□□□ -0.196e-7■■□□□ 12.1
HMGN1-220ENST00000492280 TBC1D8O95759 1140 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 DNM2P50570 870 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 GYS2P54840 703 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 ICA1Q05084 483 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 SIAH1Q8IUQ4 282 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 CDAN1Q8IWY9 1227 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 CYP2W1Q8TAV3 490 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 DNAJC7Q99615 494 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 NAPGQ99747 312 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-220ENST00000492280 TMX4Q9H1E5 349 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-220ENST00000492280 CAPN11Q9UMQ6 739 aa13.87□□□□□ -0.19
HMGN1-220ENST00000492280 ZNF263O14978 683 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 CLK2P49760 499 aaKnown RBP13.86□□□□□ -0.19
HMGN1-220ENST00000492280 FXR2P51116 673 aaKnown RBP eCLIP13.86□□□□□ -0.194e-20■□□□□ 8.5
HMGN1-220ENST00000492280 UBXN2AP68543 259 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 MRPS25P82663 173 aaKnown RBP13.86□□□□□ -0.19
HMGN1-220ENST00000492280 CYP4A11Q02928 519 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 ZYXQ15942 572 aaKnown RBP13.86□□□□□ -0.19
HMGN1-220ENST00000492280 KIAA1328Q86T90 577 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 PSMB7Q99436 277 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 TRIM34Q9BYJ4 488 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 CUEDC2Q9H467 287 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 ANKZF1Q9H8Y5 726 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 PCDHA12Q9UN75 941 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 CLRN2A0PK11 232 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 AMPD3Q01432 767 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 COASYQ13057 564 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 TRIM14Q14142 442 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 PRR16Q569H4 304 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 UNC13DQ70J99 1090 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 ZNF771Q7L3S4 317 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-220ENST00000492280 SRGAP1Q7Z6B7 1085 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 CCDC84Q86UT8 332 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-220ENST00000492280 ANKRD13CQ8N6S4 541 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 MASTLQ96GX5 879 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 ANO3Q9BYT9 981 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 PDGFDQ9GZP0 370 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-220ENST00000492280 NHEJ1Q9H9Q4 299 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-220ENST00000492280 ARGLU1Q9NWB6 273 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-220ENST00000492280 SWAP70Q9UH65 585 aa13.86□□□□□ -0.19
HMGN1-220ENST00000492280 BICDL2A1A5D9 508 aa13.85□□□□□ -0.19
HMGN1-220ENST00000492280 ERICH4A6NGS2 130 aa13.85□□□□□ -0.19
HMGN1-220ENST00000492280 ZNF185O15231 689 aa13.85□□□□□ -0.19
HMGN1-220ENST00000492280 GH2P01242 217 aa13.85□□□□□ -0.19
HMGN1-220ENST00000492280 MYL1P05976 194 aa13.85□□□□□ -0.19
HMGN1-220ENST00000492280 PSMC6P62333 389 aa13.85□□□□□ -0.19
HMGN1-220ENST00000492280 NLRC4Q9NPP4 1024 aa13.85□□□□□ -0.19
HMGN1-220ENST00000492280 MED24O75448 989 aa13.85□□□□□ -0.19
HMGN1-220ENST00000492280 ECE1P42892 770 aa13.85□□□□□ -0.19
HMGN1-220ENST00000492280 DACT2Q5SW24 774 aa13.85□□□□□ -0.19
HMGN1-220ENST00000492280 HHIPL2Q6UWX4 724 aa13.85□□□□□ -0.19
HMGN1-220ENST00000492280 AKT1S1Q96B36 256 aa13.85□□□□□ -0.19
HMGN1-220ENST00000492280 A0A1W2PQC6 194 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 TCP10L2B9ZVM9 353 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 ZMYND10O75800 440 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 SMARCA1P28370 1054 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 ALDH1B1P30837 517 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 BMS1Q14692 1282 aaKnown RBP13.84□□□□□ -0.19
HMGN1-220ENST00000492280 TSR1Q2NL82 804 aaKnown RBP13.84□□□□□ -0.19
HMGN1-220ENST00000492280 TMEM119Q4V9L6 283 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 CENPPQ6IPU0 288 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 TMC4Q7Z404 712 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 DNAJC19Q96DA6 116 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 GDAP1L1Q96MZ0 367 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 IKZF4Q9H2S9 585 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 NDST4Q9H3R1 872 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 SMARCAL1Q9NZC9 954 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 QSER1Q2KHR3 1735 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 A0A1W2PRG0 241 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 F5H6K3 240 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 PDE6BP35913 854 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 NT5C2P49902 561 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms