RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 ZKSCAN3Q9BRR0 538 aa14.64□□□□□ -0.07
TREX1-204ENST00000492235 COL20A1Q9P218 1284 aa14.64□□□□□ -0.07
TREX1-204ENST00000492235 NBNO60934 754 aa14.63□□□□□ -0.07
TREX1-204ENST00000492235 CKBP12277 381 aa14.63□□□□□ -0.07
TREX1-204ENST00000492235 CASTP20810 708 aaKnown RBP14.63□□□□□ -0.07
TREX1-204ENST00000492235 NMIQ13287 307 aaPredicted RBP14.63□□□□□ -0.07
TREX1-204ENST00000492235 CDC37Q16543 378 aaPredicted RBP14.63□□□□□ -0.07
TREX1-204ENST00000492235 GPATCH4Q5T3I0 446 aaKnown RBP14.63□□□□□ -0.07
TREX1-204ENST00000492235 FAM117BQ6P1L5 589 aa14.63□□□□□ -0.07
TREX1-204ENST00000492235 TBC1D10CQ8IV04 446 aa14.63□□□□□ -0.07
TREX1-204ENST00000492235 C7orf31Q8N865 590 aa14.63□□□□□ -0.07
TREX1-204ENST00000492235 SYTL5Q8TDW5 730 aaPredicted RBP14.63□□□□□ -0.07
TREX1-204ENST00000492235 ALG1Q9BT22 464 aa14.63□□□□□ -0.07
TREX1-204ENST00000492235 HDAC6Q9UBN7 1215 aa14.63□□□□□ -0.07
TREX1-204ENST00000492235 GTF2IRD1Q9UHL9 959 aa14.63□□□□□ -0.07
TREX1-204ENST00000492235 ZMYM6O95789 1325 aa14.63□□□□□ -0.07
TREX1-204ENST00000492235 SIP14410 1827 aa14.62□□□□□ -0.07
TREX1-204ENST00000492235 FAM86C2PA6NEL3 165 aa14.62□□□□□ -0.07
TREX1-204ENST00000492235 GJB5O95377 273 aa14.62□□□□□ -0.07
TREX1-204ENST00000492235 CXCL10P02778 98 aa14.62□□□□□ -0.07
TREX1-204ENST00000492235 PSEN2P49810 448 aa14.62□□□□□ -0.07
TREX1-204ENST00000492235 PDE1AP54750 535 aa14.62□□□□□ -0.07
TREX1-204ENST00000492235 STXBP2Q15833 593 aa14.62□□□□□ -0.07
TREX1-204ENST00000492235 DGKDQ16760 1214 aa14.62□□□□□ -0.07
TREX1-204ENST00000492235 NSUN6Q8TEA1 469 aaKnown RBP14.62□□□□□ -0.07
TREX1-204ENST00000492235 RMDN3Q96TC7 470 aa14.62□□□□□ -0.07
TREX1-204ENST00000492235 SUGCTQ9HAC7 445 aa14.62□□□□□ -0.07
TREX1-204ENST00000492235 MYH6P13533 1939 aa14.62□□□□□ -0.07
TREX1-204ENST00000492235 ABCB11O95342 1321 aa14.62□□□□□ -0.07
TREX1-204ENST00000492235 NEDD4P46934 1319 aa14.62□□□□□ -0.07
TREX1-204ENST00000492235 MYH7BA7E2Y1 1941 aa14.61□□□□□ -0.07
TREX1-204ENST00000492235 ABHD14A-ACY1A0A1B0GW23 586 aa14.61□□□□□ -0.07
TREX1-204ENST00000492235 LINC01553A4QN01 128 aa14.61□□□□□ -0.07
TREX1-204ENST00000492235 PARNO95453 639 aaKnown RBP14.61□□□□□ -0.07
TREX1-204ENST00000492235 ZNF286BP0CG31 522 aa14.61□□□□□ -0.07
TREX1-204ENST00000492235 EIF2AK2P19525 551 aaKnown RBP14.61□□□□□ -0.07
TREX1-204ENST00000492235 RBL2Q08999 1139 aa14.61□□□□□ -0.07
TREX1-204ENST00000492235 ARHGEF16Q5VV41 709 aa14.61□□□□□ -0.07
TREX1-204ENST00000492235 ADGRF4Q8IZF3 695 aa14.61□□□□□ -0.07
TREX1-204ENST00000492235 ESR2Q92731 530 aa14.61□□□□□ -0.07
TREX1-204ENST00000492235 TGS1Q96RS0 853 aaKnown RBP14.61□□□□□ -0.07
TREX1-204ENST00000492235 CRBNQ96SW2 442 aa14.61□□□□□ -0.07
TREX1-204ENST00000492235 RAD9AQ99638 391 aa14.61□□□□□ -0.07
TREX1-204ENST00000492235 CD320Q9NPF0 282 aa14.61□□□□□ -0.07
TREX1-204ENST00000492235 C11orf16Q9NQ32 467 aa14.61□□□□□ -0.07
TREX1-204ENST00000492235 LMCD1Q9NZU5 365 aa14.61□□□□□ -0.07
TREX1-204ENST00000492235 DDX41Q9UJV9 622 aaKnown RBP14.61□□□□□ -0.07
TREX1-204ENST00000492235 CCDC171Q6TFL3 1326 aa14.61□□□□□ -0.07
TREX1-204ENST00000492235 PCP11498 1178 aaKnown RBP14.6□□□□□ -0.07
TREX1-204ENST00000492235 ERVK-21P61565 698 aa14.6□□□□□ -0.07
TREX1-204ENST00000492235 ZNF200P98182 395 aaPredicted RBP14.6□□□□□ -0.07
TREX1-204ENST00000492235 IKBKEQ14164 716 aa14.6□□□□□ -0.07
TREX1-204ENST00000492235 MFSD10Q14728 455 aa14.6□□□□□ -0.07
TREX1-204ENST00000492235 QRICH1Q2TAL8 776 aa14.6□□□□□ -0.07
TREX1-204ENST00000492235 ZNF618Q5T7W0 954 aa14.6□□□□□ -0.07
TREX1-204ENST00000492235 MCF2L2Q86YR7 1114 aa14.6□□□□□ -0.07
TREX1-204ENST00000492235 PNMA1Q8ND90 353 aa14.6□□□□□ -0.07
TREX1-204ENST00000492235 WNT8BQ93098 351 aa14.6□□□□□ -0.07
TREX1-204ENST00000492235 IWS1Q96ST2 819 aa14.6□□□□□ -0.07
TREX1-204ENST00000492235 KATNAL1Q9BW62 490 aa14.6□□□□□ -0.07
TREX1-204ENST00000492235 RNF41Q9H4P4 317 aaPredicted RBP14.6□□□□□ -0.07
TREX1-204ENST00000492235 UBE2ZQ9H832 354 aaPredicted RBP14.6□□□□□ -0.07
TREX1-204ENST00000492235 MRVI1Q9Y6F6 885 aa14.6□□□□□ -0.07
TREX1-204ENST00000492235 TRIM6-TRIM34B2RNG4 842 aa14.59□□□□□ -0.07
TREX1-204ENST00000492235 DHX16O60231 1041 aaKnown RBP14.59□□□□□ -0.07
TREX1-204ENST00000492235 SORBS3O60504 671 aa14.59□□□□□ -0.07
TREX1-204ENST00000492235 GPR37L1O60883 481 aa14.59□□□□□ -0.07
TREX1-204ENST00000492235 EFCAB14O75071 495 aa14.59□□□□□ -0.07
TREX1-204ENST00000492235 F2P00734 622 aa14.59□□□□□ -0.07
TREX1-204ENST00000492235 PTK7Q13308 1070 aa14.59□□□□□ -0.07
TREX1-204ENST00000492235 LAMC2Q13753 1193 aa14.59□□□□□ -0.07
TREX1-204ENST00000492235 MBTPS1Q14703 1052 aa14.59□□□□□ -0.07
TREX1-204ENST00000492235 KIAA0753Q2KHM9 967 aa14.59□□□□□ -0.07
TREX1-204ENST00000492235 TRAF7Q6Q0C0 670 aa14.59□□□□□ -0.07
TREX1-204ENST00000492235 DGKHQ86XP1 1220 aa14.59□□□□□ -0.07
TREX1-204ENST00000492235 EMID1Q96A84 441 aaPredicted RBP14.59□□□□□ -0.07
TREX1-204ENST00000492235 MAF1Q9H063 256 aa14.59□□□□□ -0.07
TREX1-204ENST00000492235 KAT14Q9H8E8 782 aa14.59□□□□□ -0.07
TREX1-204ENST00000492235 VAT1LQ9HCJ6 419 aa14.59□□□□□ -0.07
TREX1-204ENST00000492235 MRPL11Q9Y3B7 192 aaKnown RBP14.59□□□□□ -0.07
TREX1-204ENST00000492235 ARIH1Q9Y4X5 557 aaPredicted RBP14.59□□□□□ -0.07
TREX1-204ENST00000492235 BRWD1Q9NSI6 2320 aa14.58□□□□□ -0.08
TREX1-204ENST00000492235 LAMA4Q16363 1823 aa14.58□□□□□ -0.08
TREX1-204ENST00000492235 PI4K2BG5E9Z4 385 aa14.58□□□□□ -0.08
TREX1-204ENST00000492235 HAS3O00219 553 aa14.58□□□□□ -0.08
TREX1-204ENST00000492235 ZNF213O14771 459 aa14.58□□□□□ -0.08
TREX1-204ENST00000492235 KDM4AO75164 1064 aa14.58□□□□□ -0.08
TREX1-204ENST00000492235 EIF3JO75822 258 aaKnown RBP14.58□□□□□ -0.08
TREX1-204ENST00000492235 CFBP00751 764 aa14.58□□□□□ -0.08
TREX1-204ENST00000492235 NR3C2P08235 984 aa14.58□□□□□ -0.08
TREX1-204ENST00000492235 KCNA5P22460 613 aa14.58□□□□□ -0.08
TREX1-204ENST00000492235 TRIM71Q2Q1W2 868 aaKnown RBP14.58□□□□□ -0.08
TREX1-204ENST00000492235 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.58□□□□□ -0.08
TREX1-204ENST00000492235 IQCA1Q86XH1 822 aa14.58□□□□□ -0.08
TREX1-204ENST00000492235 FBXO11Q86XK2 927 aa14.58□□□□□ -0.08
TREX1-204ENST00000492235 DHX37Q8IY37 1157 aaKnown RBP14.58□□□□□ -0.08
TREX1-204ENST00000492235 PPTC7Q8NI37 304 aa14.58□□□□□ -0.08
TREX1-204ENST00000492235 RILPL2Q969X0 211 aa14.58□□□□□ -0.08
TREX1-204ENST00000492235 C17orf80Q9BSJ5 609 aa14.58□□□□□ -0.08
TREX1-204ENST00000492235 PXMP2Q9NR77 195 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms