RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 TRIM71Q2Q1W2 868 aaKnown RBP15.56■□□□□ 0.08
USF1-206ENST00000491629 BRDTQ58F21 947 aaPredicted RBP15.56■□□□□ 0.08
USF1-206ENST00000491629 RRP12Q5JTH9 1297 aaKnown RBP15.56■□□□□ 0.08
USF1-206ENST00000491629 LRRC8DQ7L1W4 858 aa15.56■□□□□ 0.08
USF1-206ENST00000491629 CAGE1Q8TC20 777 aa15.56■□□□□ 0.08
USF1-206ENST00000491629 FAM227BQ96M60 508 aa15.56■□□□□ 0.08
USF1-206ENST00000491629 TAAR1Q96RJ0 339 aa15.56■□□□□ 0.08
USF1-206ENST00000491629 LMCD1Q9NZU5 365 aa15.56■□□□□ 0.08
USF1-206ENST00000491629 NOD1Q9Y239 953 aa15.56■□□□□ 0.08
USF1-206ENST00000491629 BAZ2BQ9UIF8 2168 aaKnown RBP15.56■□□□□ 0.08
USF1-206ENST00000491629 A0A0D9SFI3 127 aa15.55■□□□□ 0.08
USF1-206ENST00000491629 GOLGA8HP0CJ92 632 aa15.55■□□□□ 0.08
USF1-206ENST00000491629 KCNJ6P48051 423 aa15.55■□□□□ 0.08
USF1-206ENST00000491629 MKRN4PQ13434 485 aaPredicted RBP15.55■□□□□ 0.08
USF1-206ENST00000491629 USH1GQ495M9 461 aa15.55■□□□□ 0.08
USF1-206ENST00000491629 CNKSR3Q6P9H4 555 aa15.55■□□□□ 0.08
USF1-206ENST00000491629 ZNF589Q86UQ0 364 aaPredicted RBP15.55■□□□□ 0.08
USF1-206ENST00000491629 RGS22Q8NE09 1264 aa15.55■□□□□ 0.08
USF1-206ENST00000491629 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.55■□□□□ 0.08
USF1-206ENST00000491629 UBE2ZQ9H832 354 aaPredicted RBP15.55■□□□□ 0.08
USF1-206ENST00000491629 TOMM22Q9NS69 142 aa15.55■□□□□ 0.08
USF1-206ENST00000491629 HDAC6Q9UBN7 1215 aa15.55■□□□□ 0.08
USF1-206ENST00000491629 GTF2IRD1Q9UHL9 959 aa15.55■□□□□ 0.08
USF1-206ENST00000491629 HCN4Q9Y3Q4 1203 aa15.55■□□□□ 0.08
USF1-206ENST00000491629 RALGAPA2Q2PPJ7 1873 aa15.54■□□□□ 0.08
USF1-206ENST00000491629 HAND2P61296 217 aa15.54■□□□□ 0.08
USF1-206ENST00000491629 ZNF200P98182 395 aaPredicted RBP15.54■□□□□ 0.08
USF1-206ENST00000491629 SEPT14Q6ZU15 432 aa15.54■□□□□ 0.08
USF1-206ENST00000491629 CHST3Q7LGC8 479 aa15.54■□□□□ 0.08
USF1-206ENST00000491629 TBC1D10CQ8IV04 446 aa15.54■□□□□ 0.08
USF1-206ENST00000491629 FAM178BQ8IXR5 827 aa15.54■□□□□ 0.08
USF1-206ENST00000491629 SYTL5Q8TDW5 730 aaPredicted RBP15.54■□□□□ 0.08
USF1-206ENST00000491629 RAD9AQ99638 391 aa15.54■□□□□ 0.08
USF1-206ENST00000491629 UBA5Q9GZZ9 404 aa15.54■□□□□ 0.08
USF1-206ENST00000491629 HAS3O00219 553 aa15.53■□□□□ 0.08
USF1-206ENST00000491629 GH1P01241 217 aa15.53■□□□□ 0.08
USF1-206ENST00000491629 HSPD1P10809 573 aaKnown RBP15.53■□□□□ 0.08
USF1-206ENST00000491629 ZNF618Q5T7W0 954 aa15.53■□□□□ 0.08
USF1-206ENST00000491629 FAM117BQ6P1L5 589 aa15.53■□□□□ 0.08
USF1-206ENST00000491629 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.53■□□□□ 0.08
USF1-206ENST00000491629 CCDC155Q8N6L0 562 aa15.53■□□□□ 0.08
USF1-206ENST00000491629 TGS1Q96RS0 853 aaKnown RBP15.53■□□□□ 0.08
USF1-206ENST00000491629 C17orf80Q9BSJ5 609 aa15.53■□□□□ 0.08
USF1-206ENST00000491629 ZBED2Q9BTP6 218 aa15.53■□□□□ 0.08
USF1-206ENST00000491629 OSBPL7Q9BZF2 842 aa15.53■□□□□ 0.08
USF1-206ENST00000491629 HELLSQ9NRZ9 838 aa15.53■□□□□ 0.08
USF1-206ENST00000491629 DDX41Q9UJV9 622 aaKnown RBP15.53■□□□□ 0.08
USF1-206ENST00000491629 ZMYM6O95789 1325 aa15.52■□□□□ 0.08
USF1-206ENST00000491629 NEDD4P46934 1319 aa15.52■□□□□ 0.08
USF1-206ENST00000491629 KAT6AQ92794 2004 aa15.52■□□□□ 0.08
USF1-206ENST00000491629 IL9P15248 144 aa15.52■□□□□ 0.08
USF1-206ENST00000491629 PSEN2P49810 448 aa15.52■□□□□ 0.08
USF1-206ENST00000491629 LEXMQ3ZCV2 418 aa15.52■□□□□ 0.08
USF1-206ENST00000491629 TTC14Q96N46 770 aa15.52■□□□□ 0.08
USF1-206ENST00000491629 ZKSCAN3Q9BRR0 538 aa15.52■□□□□ 0.08
USF1-206ENST00000491629 ALG1Q9BT22 464 aa15.52■□□□□ 0.08
USF1-206ENST00000491629 ABHD14A-ACY1A0A1B0GW23 586 aa15.51■□□□□ 0.07
USF1-206ENST00000491629 OPLAHO14841 1288 aa15.51■□□□□ 0.07
USF1-206ENST00000491629 RGS20O76081 388 aa15.51■□□□□ 0.07
USF1-206ENST00000491629 ZNF286BP0CG31 522 aa15.51■□□□□ 0.07
USF1-206ENST00000491629 CASTP20810 708 aaKnown RBP15.51■□□□□ 0.07
USF1-206ENST00000491629 CDC37Q16543 378 aaPredicted RBP15.51■□□□□ 0.07
USF1-206ENST00000491629 EMID1Q96A84 441 aaPredicted RBP15.51■□□□□ 0.07
USF1-206ENST00000491629 MPHOSPH6Q99547 160 aaKnown RBP15.51■□□□□ 0.07
USF1-206ENST00000491629 PNMA2Q9UL42 364 aa15.51■□□□□ 0.07
USF1-206ENST00000491629 F2P00734 622 aa15.5■□□□□ 0.07
USF1-206ENST00000491629 HOXD8P13378 290 aaPredicted RBP15.5■□□□□ 0.07
USF1-206ENST00000491629 KCNA5P22460 613 aa15.5■□□□□ 0.07
USF1-206ENST00000491629 HTRA4P83105 476 aaPredicted RBP15.5■□□□□ 0.07
USF1-206ENST00000491629 NMIQ13287 307 aaPredicted RBP15.5■□□□□ 0.07
USF1-206ENST00000491629 PTK7Q13308 1070 aa15.5■□□□□ 0.07
USF1-206ENST00000491629 MFSD10Q14728 455 aa15.5■□□□□ 0.07
USF1-206ENST00000491629 DGKDQ16760 1214 aa15.5■□□□□ 0.07
USF1-206ENST00000491629 KIAA0753Q2KHM9 967 aa15.5■□□□□ 0.07
USF1-206ENST00000491629 MCMDC2Q4G0Z9 681 aa15.5■□□□□ 0.07
USF1-206ENST00000491629 ADGRF4Q8IZF3 695 aa15.5■□□□□ 0.07
USF1-206ENST00000491629 NSUN6Q8TEA1 469 aaKnown RBP15.5■□□□□ 0.07
USF1-206ENST00000491629 EVI5LQ96CN4 794 aa15.5■□□□□ 0.07
USF1-206ENST00000491629 RMDN3Q96TC7 470 aa15.5■□□□□ 0.07
USF1-206ENST00000491629 ABCB11O95342 1321 aa15.49■□□□□ 0.07
USF1-206ENST00000491629 LOXHD1Q8IVV2 1947 aa15.49■□□□□ 0.07
USF1-206ENST00000491629 USP34Q70CQ2 3546 aa15.49■□□□□ 0.07
USF1-206ENST00000491629 B4DLN1 442 aa15.49■□□□□ 0.07
USF1-206ENST00000491629 PARNO95453 639 aaKnown RBP15.49■□□□□ 0.07
USF1-206ENST00000491629 EIF2AK2P19525 551 aaKnown RBP15.49■□□□□ 0.07
USF1-206ENST00000491629 MRPL12P52815 198 aaKnown RBP15.49■□□□□ 0.07
USF1-206ENST00000491629 PDE1AP54750 535 aa15.49■□□□□ 0.07
USF1-206ENST00000491629 IKBKEQ14164 716 aa15.49■□□□□ 0.07
USF1-206ENST00000491629 STXBP2Q15833 593 aa15.49■□□□□ 0.07
USF1-206ENST00000491629 QRICH1Q2TAL8 776 aa15.49■□□□□ 0.07
USF1-206ENST00000491629 GPATCH4Q5T3I0 446 aaKnown RBP15.49■□□□□ 0.07
USF1-206ENST00000491629 GJD3Q8N144 294 aa15.49■□□□□ 0.07
USF1-206ENST00000491629 C7orf31Q8N865 590 aa15.49■□□□□ 0.07
USF1-206ENST00000491629 NEK9Q8TD19 979 aa15.49■□□□□ 0.07
USF1-206ENST00000491629 SP7Q8TDD2 431 aaPredicted RBP15.49■□□□□ 0.07
USF1-206ENST00000491629 IWS1Q96ST2 819 aa15.49■□□□□ 0.07
USF1-206ENST00000491629 TECTAO75443 2155 aa15.48■□□□□ 0.07
USF1-206ENST00000491629 KIAA1671Q9BY89 1806 aa15.48■□□□□ 0.07
USF1-206ENST00000491629 GRXCR2A6NFK2 248 aa15.48■□□□□ 0.07
USF1-206ENST00000491629 PRR33A8MZF0 331 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms