RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 PIBF1Q8WXW3 757 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 COPS5Q92905 334 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 FAM161BQ96MY7 647 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 TAAR1Q96RJ0 339 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 PPP1R12CQ9BZL4 782 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 MAD2L2Q9UI95 211 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 MRPL11Q9Y3B7 192 aaKnown RBP15.73■□□□□ 0.11
CDK9-204ENST00000491521 B4DLN1 442 aa15.72■□□□□ 0.11
CDK9-204ENST00000491521 CFBP00751 764 aa15.72■□□□□ 0.11
CDK9-204ENST00000491521 ADD1P35611 737 aaKnown RBP15.72■□□□□ 0.11
CDK9-204ENST00000491521 MRPL12P52815 198 aaKnown RBP15.72■□□□□ 0.11
CDK9-204ENST00000491521 CHMP4BP1P59074 171 aa15.72■□□□□ 0.11
CDK9-204ENST00000491521 SCRN1Q12765 414 aa15.72■□□□□ 0.11
CDK9-204ENST00000491521 ITGA7Q13683 1181 aa15.72■□□□□ 0.11
CDK9-204ENST00000491521 PPP2R5BQ15173 497 aa15.72■□□□□ 0.11
CDK9-204ENST00000491521 MCF2L2Q86YR7 1114 aa15.72■□□□□ 0.11
CDK9-204ENST00000491521 DNERQ8NFT8 737 aa15.72■□□□□ 0.11
CDK9-204ENST00000491521 SYTL5Q8TDW5 730 aaPredicted RBP15.72■□□□□ 0.11
CDK9-204ENST00000491521 PPP1R13LQ8WUF5 828 aa15.72■□□□□ 0.11
CDK9-204ENST00000491521 GTF3C6Q969F1 213 aa15.72■□□□□ 0.11
CDK9-204ENST00000491521 RNPC3Q96LT9 517 aaKnown RBP15.72■□□□□ 0.11
CDK9-204ENST00000491521 IPO9Q96P70 1041 aaKnown RBP15.72■□□□□ 0.11
CDK9-204ENST00000491521 MAP3K14Q99558 947 aa15.72■□□□□ 0.11
CDK9-204ENST00000491521 RBM28Q9NW13 759 aaKnown RBP15.72■□□□□ 0.11
CDK9-204ENST00000491521 COL20A1Q9P218 1284 aa15.72■□□□□ 0.11
CDK9-204ENST00000491521 TBX21Q9UL17 535 aa15.72■□□□□ 0.11
CDK9-204ENST00000491521 LOC102724159A0A0B4J2E5 919 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 CABYRO75952 493 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 TIMP1P01033 207 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 EIF2AK2P19525 551 aaKnown RBP15.71■□□□□ 0.11
CDK9-204ENST00000491521 CDC27P30260 824 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 GNAQP50148 359 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 RCAN1P53805 252 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 NKX3-2P78367 333 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 GRM4Q14833 912 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 PWP2Q15269 919 aaKnown RBP15.71■□□□□ 0.11
CDK9-204ENST00000491521 ARHGEF16Q5VV41 709 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 SEPT14Q6ZU15 432 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 FAM126BQ8IXS8 530 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 CCDC82Q8N4S0 544 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 RGS22Q8NE09 1264 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 SCFD2Q8WU76 684 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 RMDN3Q96TC7 470 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 AMNQ9BXJ7 453 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 TRPV6Q9H1D0 765 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 Q9Y3F1 56 aa15.71■□□□□ 0.11
CDK9-204ENST00000491521 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.71■□□□□ 0.11
CDK9-204ENST00000491521 RBM47A0AV96 593 aaKnown RBP15.7■□□□□ 0.1
CDK9-204ENST00000491521 PALM3A6NDB9 673 aaPredicted RBP15.7■□□□□ 0.1
CDK9-204ENST00000491521 PPP1R11O60927 126 aaPredicted RBP15.7■□□□□ 0.1
CDK9-204ENST00000491521 TXNP10599 105 aaKnown RBP15.7■□□□□ 0.1
CDK9-204ENST00000491521 EDNRBP24530 442 aa15.7■□□□□ 0.1
CDK9-204ENST00000491521 CYP2C18P33260 490 aa15.7■□□□□ 0.1
CDK9-204ENST00000491521 CPT1AP50416 773 aa15.7■□□□□ 0.1
CDK9-204ENST00000491521 CUL4AQ13619 759 aa15.7■□□□□ 0.1
CDK9-204ENST00000491521 NSUN6Q8TEA1 469 aaKnown RBP15.7■□□□□ 0.1
CDK9-204ENST00000491521 PIGSQ96S52 555 aa15.7■□□□□ 0.1
CDK9-204ENST00000491521 PCDHA1Q9Y5I3 950 aa15.7■□□□□ 0.1
CDK9-204ENST00000491521 GRIN2DO15399 1336 aa15.69■□□□□ 0.1
CDK9-204ENST00000491521 ZBTB5O15062 677 aa15.69■□□□□ 0.1
CDK9-204ENST00000491521 DTNBO60941 627 aa15.69■□□□□ 0.1
CDK9-204ENST00000491521 CDKL5O76039 1030 aa15.69■□□□□ 0.1
CDK9-204ENST00000491521 ARIH2O95376 493 aa15.69■□□□□ 0.1
CDK9-204ENST00000491521 HOXA13P31271 388 aaPredicted RBP15.69■□□□□ 0.1
CDK9-204ENST00000491521 TTLL4Q14679 1199 aa15.69■□□□□ 0.1
CDK9-204ENST00000491521 SLC35G1Q2M3R5 365 aa15.69■□□□□ 0.1
CDK9-204ENST00000491521 BRDTQ58F21 947 aaPredicted RBP15.69■□□□□ 0.1
CDK9-204ENST00000491521 FAM47CQ5HY64 1035 aa15.69■□□□□ 0.1
CDK9-204ENST00000491521 GPR153Q6NV75 609 aa15.69■□□□□ 0.1
CDK9-204ENST00000491521 CMTR1Q8N1G2 835 aaKnown RBP15.69■□□□□ 0.1
CDK9-204ENST00000491521 FAM217BQ9NTX9 383 aaPredicted RBP15.69■□□□□ 0.1
CDK9-204ENST00000491521 POLR3EQ9NVU0 708 aa15.69■□□□□ 0.1
CDK9-204ENST00000491521 SMC3Q9UQE7 1217 aa15.69■□□□□ 0.1
CDK9-204ENST00000491521 A0A0C4DFX4 3053 aa15.69■□□□□ 0.1
CDK9-204ENST00000491521 SORBS3O60504 671 aa15.68■□□□□ 0.1
CDK9-204ENST00000491521 PPFIA3O75145 1194 aa15.68■□□□□ 0.1
CDK9-204ENST00000491521 PLEKHA8P1O95397 391 aa15.68■□□□□ 0.1
CDK9-204ENST00000491521 CD4P01730 458 aa15.68■□□□□ 0.1
CDK9-204ENST00000491521 ACRP10323 421 aa15.68■□□□□ 0.1
CDK9-204ENST00000491521 MYCLP12524 364 aaPredicted RBP15.68■□□□□ 0.1
CDK9-204ENST00000491521 CSF2RAP15509 400 aa15.68■□□□□ 0.1
CDK9-204ENST00000491521 AKAP17AQ02040 695 aaKnown RBP15.68■□□□□ 0.1
CDK9-204ENST00000491521 SSRP1Q08945 709 aaKnown RBP15.68■□□□□ 0.1
CDK9-204ENST00000491521 LY6KQ17RY6 165 aa15.68■□□□□ 0.1
CDK9-204ENST00000491521 MFSD5Q6N075 450 aa15.68■□□□□ 0.1
CDK9-204ENST00000491521 LZTS2Q9BRK4 669 aa15.68■□□□□ 0.1
CDK9-204ENST00000491521 LLPHQ9BRT6 129 aaKnown RBP15.68■□□□□ 0.1
CDK9-204ENST00000491521 HIPK3Q9H422 1215 aa15.68■□□□□ 0.1
CDK9-204ENST00000491521 MTMR10Q9NXD2 777 aa15.68■□□□□ 0.1
CDK9-204ENST00000491521 KIAA1217Q5T5P2 1943 aa15.68■□□□□ 0.1
CDK9-204ENST00000491521 UMODL1Q5DID0 1318 aa15.68■□□□□ 0.1
CDK9-204ENST00000491521 OPLAHO14841 1288 aa15.67■□□□□ 0.1
CDK9-204ENST00000491521 NKRFO15226 690 aaKnown RBP eCLIP15.67■□□□□ 0.1
CDK9-204ENST00000491521 B4GALT4O60513 344 aa15.67■□□□□ 0.1
CDK9-204ENST00000491521 CCL23P55773 120 aa15.67■□□□□ 0.1
CDK9-204ENST00000491521 PURAQ00577 322 aaKnown RBP15.67■□□□□ 0.1
CDK9-204ENST00000491521 ST3GAL1Q11201 340 aa15.67■□□□□ 0.1
CDK9-204ENST00000491521 PPIGQ13427 754 aaKnown RBP eCLIP15.67■□□□□ 0.18e-7■■■□□ 15.1
CDK9-204ENST00000491521 STXBP2Q15833 593 aa15.67■□□□□ 0.1
CDK9-204ENST00000491521 ZNF697Q5TEC3 545 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms