RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	MMP3	P08254	477 aa		22.67	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	KAT2B	Q92831	832 aa		22.67	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	SAMD11	Q96NU1	681 aa		22.67	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	C17orf80	Q9BSJ5	609 aa		22.67	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334		H3BQ06	376 aa	Predicted RBP	22.66	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	HNRNPU	Q00839	825 aa	Known RBP eCLIP	22.66	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	CTDSPL2	Q05D32	466 aa		22.66	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	PTK7	Q13308	1070 aa		22.66	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	DGKD	Q16760	1214 aa		22.66	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	TCTN1	Q2MV58	587 aa		22.66	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	TIGD5	Q53EQ6	642 aa		22.66	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	HDAC6	Q9UBN7	1215 aa		22.66	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	PTPRS	Q13332	1948 aa		22.65	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	FRMPD2	Q68DX3	1309 aa	Predicted RBP	22.65	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	AMH	P03971	560 aa		22.65	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	TOP1	P11387	765 aa	Known RBP	22.65	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	LY6K	Q17RY6	165 aa		22.65	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	EP400NL	Q6ZTU2	488 aa		22.65	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	BANK1	Q8NDB2	785 aa		22.65	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	RGS22	Q8NE09	1264 aa		22.65	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	SNX27	Q96L92	541 aa		22.65	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	MFSD14A	Q96MC6	490 aa		22.65	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	KATNAL1	Q9BW62	490 aa		22.65	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	LGR5	O75473	907 aa		22.64	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	ZNF618	Q5T7W0	954 aa		22.64	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	TSHZ3	Q63HK5	1081 aa		22.64	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	SEPT14	Q6ZU15	432 aa		22.64	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	CHST3	Q7LGC8	479 aa		22.64	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	PABPC5	Q96DU9	382 aa	Known RBP	22.64	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	MAF1	Q9H063	256 aa		22.64	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	EMSY	Q7Z589	1322 aa		22.63	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	WDR19	Q8NEZ3	1342 aa		22.63	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	ORC4	O43929	436 aa		22.63	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	HTRA4	P83105	476 aa	Predicted RBP	22.63	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	ZP2	Q05996	745 aa		22.63	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	ARHGAP1	Q07960	439 aa		22.63	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	EPC2	Q52LR7	807 aa		22.63	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	ZMYM1	Q5SVZ6	1142 aa		22.63	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	22.63	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	TMEM47	Q9BQJ4	181 aa		22.63	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	ALG1	Q9BT22	464 aa		22.63	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	ANAPC4	Q9UJX5	808 aa		22.63	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	C19orf67	A6NJJ6	358 aa		22.62	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334		H3BNC9	293 aa		22.62	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	NCK2	O43639	380 aa		22.62	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	PSEN2	P49810	448 aa		22.62	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	ADHFE1	Q8IWW8	467 aa		22.62	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	MYOCD	Q8IZQ8	938 aa		22.62	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	SP7	Q8TDD2	431 aa	Predicted RBP	22.62	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	WDFY4	Q6ZS81	3184 aa		22.62	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	GPM6B	Q13491	265 aa		22.61	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	MFSD10	Q14728	455 aa		22.61	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	STXBP2	Q15833	593 aa		22.61	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	TRIM71	Q2Q1W2	868 aa	Known RBP	22.61	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	HFE2	Q6ZVN8	426 aa		22.61	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	DBF4B	Q8NFT6	615 aa		22.61	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	NSUN6	Q8TEA1	469 aa	Known RBP	22.61	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	IWS1	Q96ST2	819 aa		22.61	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	FSD1	Q9BTV5	496 aa		22.61	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	TOMM22	Q9NS69	142 aa		22.61	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	TCP11L1	Q9NUJ3	509 aa		22.61	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	SI	P14410	1827 aa		22.61	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	PDHB	P11177	359 aa		22.6	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	MBTPS1	Q14703	1052 aa		22.6	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	KIAA0753	Q2KHM9	967 aa		22.6	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	TCEAL5	Q5H9L2	206 aa		22.6	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	TRAF7	Q6Q0C0	670 aa		22.6	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	NSUN3	Q9H649	340 aa	Known RBP	22.6	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	FGR	P09769	529 aa		22.59	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	ZNF543	Q08ER8	600 aa		22.59	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	LAMC2	Q13753	1193 aa		22.59	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	COL19A1	Q14993	1142 aa		22.59	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	EMID1	Q96A84	441 aa	Predicted RBP	22.59	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	YME1L1	Q96TA2	773 aa		22.59	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	RSPH10B2	B2RC85	870 aa		22.58	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	HAS3	O00219	553 aa		22.58	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	RSPH10B	P0C881	870 aa		22.58	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	USH1G	Q495M9	461 aa		22.58	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	DHX37	Q8IY37	1157 aa	Known RBP	22.58	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	TMEM192	Q8IY95	271 aa		22.58	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	TTC14	Q96N46	770 aa		22.58	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	TAAR1	Q96RJ0	339 aa		22.58	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	POP1	Q99575	1024 aa	Known RBP	22.58	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	DCTPP1	Q9H773	170 aa		22.58	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	CLDND1	Q9NY35	253 aa		22.58	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	DDX41	Q9UJV9	622 aa	Known RBP	22.58	■■□□□ 1.21
CDK5RAP2-218	ENST00000491334	TTC41P	Q6P2S7	1318 aa		22.57	■■□□□ 1.2
CDK5RAP2-218	ENST00000491334	F2	P00734	622 aa		22.57	■■□□□ 1.2
CDK5RAP2-218	ENST00000491334	IRS1	P35568	1242 aa		22.57	■■□□□ 1.2
CDK5RAP2-218	ENST00000491334	ZNF200	P98182	395 aa	Predicted RBP	22.57	■■□□□ 1.2
CDK5RAP2-218	ENST00000491334	RRP12	Q5JTH9	1297 aa	Known RBP	22.57	■■□□□ 1.2
CDK5RAP2-218	ENST00000491334	PPTC7	Q8NI37	304 aa		22.57	■■□□□ 1.2
CDK5RAP2-218	ENST00000491334	TOP1MT	Q969P6	601 aa		22.57	■■□□□ 1.2
CDK5RAP2-218	ENST00000491334	RMDN3	Q96TC7	470 aa		22.57	■■□□□ 1.2
CDK5RAP2-218	ENST00000491334	FOXP2	O15409	715 aa		22.56	■■□□□ 1.2
CDK5RAP2-218	ENST00000491334	PPFIA4	O75335	1185 aa		22.56	■■□□□ 1.2
CDK5RAP2-218	ENST00000491334	EIF3J	O75822	258 aa	Known RBP	22.56	■■□□□ 1.2
CDK5RAP2-218	ENST00000491334	THPO	P40225	353 aa		22.56	■■□□□ 1.2
CDK5RAP2-218	ENST00000491334	MKRN4P	Q13434	485 aa	Predicted RBP	22.56	■■□□□ 1.2
CDK5RAP2-218	ENST00000491334	PLEKHG4	Q58EX7	1191 aa		22.56	■■□□□ 1.2

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms