RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 RBL2Q08999 1139 aa16.38■□□□□ 0.21
VARS-227ENST00000489979 TAAR1Q96RJ0 339 aa16.38■□□□□ 0.21
VARS-227ENST00000489979 TGS1Q96RS0 853 aaKnown RBP16.38■□□□□ 0.21
VARS-227ENST00000489979 CPVLQ9H3G5 476 aa16.38■□□□□ 0.21
VARS-227ENST00000489979 UBE2ZQ9H832 354 aaPredicted RBP16.38■□□□□ 0.21
VARS-227ENST00000489979 GTF2IRD1Q9UHL9 959 aa16.38■□□□□ 0.21
VARS-227ENST00000489979 PCDHB15Q9Y5E8 787 aa16.38■□□□□ 0.21
VARS-227ENST00000489979 ABHD14A-ACY1A0A1B0GW23 586 aa16.37■□□□□ 0.21
VARS-227ENST00000489979 LINC01553A4QN01 128 aa16.37■□□□□ 0.21
VARS-227ENST00000489979 GOLGA8HP0CJ92 632 aa16.37■□□□□ 0.21
VARS-227ENST00000489979 HAND2P61296 217 aa16.37■□□□□ 0.21
VARS-227ENST00000489979 FAM117BQ6P1L5 589 aa16.37■□□□□ 0.21
VARS-227ENST00000489979 SYTL5Q8TDW5 730 aaPredicted RBP16.37■□□□□ 0.21
VARS-227ENST00000489979 EVI5LQ96CN4 794 aa16.37■□□□□ 0.21
VARS-227ENST00000489979 FAM227BQ96M60 508 aa16.37■□□□□ 0.21
VARS-227ENST00000489979 TTC14Q96N46 770 aa16.37■□□□□ 0.21
VARS-227ENST00000489979 UBA5Q9GZZ9 404 aa16.37■□□□□ 0.21
VARS-227ENST00000489979 COL20A1Q9P218 1284 aa16.37■□□□□ 0.21
VARS-227ENST00000489979 HDAC6Q9UBN7 1215 aa16.37■□□□□ 0.21
VARS-227ENST00000489979 SALL3Q9BXA9 1300 aa16.37■□□□□ 0.21
VARS-227ENST00000489979 MUC6Q6W4X9 2439 aa16.37■□□□□ 0.21
VARS-227ENST00000489979 MYH7BA7E2Y1 1941 aa16.37■□□□□ 0.21
VARS-227ENST00000489979 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.36■□□□□ 0.21
VARS-227ENST00000489979 A0A0D9SFI3 127 aa16.36■□□□□ 0.21
VARS-227ENST00000489979 PSEN2P49810 448 aa16.36■□□□□ 0.21
VARS-227ENST00000489979 STXBP2Q15833 593 aa16.36■□□□□ 0.21
VARS-227ENST00000489979 DGKDQ16760 1214 aa16.36■□□□□ 0.21
VARS-227ENST00000489979 MCMDC2Q4G0Z9 681 aa16.36■□□□□ 0.21
VARS-227ENST00000489979 C7orf31Q8N865 590 aa16.36■□□□□ 0.21
VARS-227ENST00000489979 NSUN6Q8TEA1 469 aaKnown RBP16.36■□□□□ 0.21
VARS-227ENST00000489979 CRBNQ96SW2 442 aa16.36■□□□□ 0.21
VARS-227ENST00000489979 ALG1Q9BT22 464 aa16.36■□□□□ 0.21
VARS-227ENST00000489979 EFCAB14O75071 495 aa16.35■□□□□ 0.21
VARS-227ENST00000489979 HSPD1P10809 573 aaKnown RBP16.35■□□□□ 0.21
VARS-227ENST00000489979 KCNA5P22460 613 aa16.35■□□□□ 0.21
VARS-227ENST00000489979 PTK7Q13308 1070 aa16.35■□□□□ 0.21
VARS-227ENST00000489979 IKBKEQ14164 716 aa16.35■□□□□ 0.21
VARS-227ENST00000489979 CDC37Q16543 378 aaPredicted RBP16.35■□□□□ 0.21
VARS-227ENST00000489979 LEXMQ3ZCV2 418 aa16.35■□□□□ 0.21
VARS-227ENST00000489979 GPATCH4Q5T3I0 446 aaKnown RBP16.35■□□□□ 0.21
VARS-227ENST00000489979 ZNF618Q5T7W0 954 aa16.35■□□□□ 0.21
VARS-227ENST00000489979 DIEXFQ68CQ4 756 aaKnown RBP16.35■□□□□ 0.21
VARS-227ENST00000489979 TRAF7Q6Q0C0 670 aa16.35■□□□□ 0.21
VARS-227ENST00000489979 MFSD6Q6ZSS7 791 aa16.35■□□□□ 0.21
VARS-227ENST00000489979 WNT8BQ93098 351 aa16.35■□□□□ 0.21
VARS-227ENST00000489979 RMDN3Q96TC7 470 aa16.35■□□□□ 0.21
VARS-227ENST00000489979 KATNAL1Q9BW62 490 aa16.35■□□□□ 0.21
VARS-227ENST00000489979 DDX41Q9UJV9 622 aaKnown RBP16.35■□□□□ 0.21
VARS-227ENST00000489979 ABCB11O95342 1321 aa16.35■□□□□ 0.21
VARS-227ENST00000489979 MYH6P13533 1939 aa16.35■□□□□ 0.21
VARS-227ENST00000489979 ZNF286BP0CG31 522 aa16.34■□□□□ 0.21
VARS-227ENST00000489979 ZNF200P98182 395 aaPredicted RBP16.34■□□□□ 0.21
VARS-227ENST00000489979 MBTPS1Q14703 1052 aa16.34■□□□□ 0.21
VARS-227ENST00000489979 MFSD10Q14728 455 aa16.34■□□□□ 0.21
VARS-227ENST00000489979 TRIM71Q2Q1W2 868 aaKnown RBP16.34■□□□□ 0.21
VARS-227ENST00000489979 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.34■□□□□ 0.212e-6■■□□□ 11.9
VARS-227ENST00000489979 ZNF589Q86UQ0 364 aaPredicted RBP16.34■□□□□ 0.21
VARS-227ENST00000489979 TBC1D10CQ8IV04 446 aa16.34■□□□□ 0.21
VARS-227ENST00000489979 FAM178BQ8IXR5 827 aa16.34■□□□□ 0.21
VARS-227ENST00000489979 GJD3Q8N144 294 aa16.34■□□□□ 0.21
VARS-227ENST00000489979 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.34■□□□□ 0.21
VARS-227ENST00000489979 IWS1Q96ST2 819 aa16.34■□□□□ 0.21
VARS-227ENST00000489979 ZKSCAN3Q9BRR0 538 aa16.34■□□□□ 0.21
VARS-227ENST00000489979 MAF1Q9H063 256 aa16.34■□□□□ 0.21
VARS-227ENST00000489979 ZMYM6O95789 1325 aa16.34■□□□□ 0.21
VARS-227ENST00000489979 MICAL3Q7RTP6 2002 aa16.33■□□□□ 0.21
VARS-227ENST00000489979 PIEZO1Q92508 2521 aa16.33■□□□□ 0.2
VARS-227ENST00000489979 LGR5O75473 907 aa16.33■□□□□ 0.2
VARS-227ENST00000489979 IL9P15248 144 aa16.33■□□□□ 0.2
VARS-227ENST00000489979 EIF2AK2P19525 551 aaKnown RBP16.33■□□□□ 0.2
VARS-227ENST00000489979 KIAA0753Q2KHM9 967 aa16.33■□□□□ 0.2
VARS-227ENST00000489979 ARHGEF16Q5VV41 709 aa16.33■□□□□ 0.2
VARS-227ENST00000489979 MCF2L2Q86YR7 1114 aa16.33■□□□□ 0.2
VARS-227ENST00000489979 FBXO22Q8NEZ5 403 aa16.33■□□□□ 0.2
VARS-227ENST00000489979 EMID1Q96A84 441 aaPredicted RBP16.33■□□□□ 0.2
VARS-227ENST00000489979 C17orf80Q9BSJ5 609 aa16.33■□□□□ 0.2
VARS-227ENST00000489979 MRVI1Q9Y6F6 885 aa16.33■□□□□ 0.2
VARS-227ENST00000489979 HAS3O00219 553 aa16.32■□□□□ 0.2
VARS-227ENST00000489979 F2P00734 622 aa16.32■□□□□ 0.2
VARS-227ENST00000489979 PCP11498 1178 aaKnown RBP16.32■□□□□ 0.2
VARS-227ENST00000489979 SSTR3P32745 418 aaPredicted RBP16.32■□□□□ 0.2
VARS-227ENST00000489979 NEDD4P46934 1319 aa16.32■□□□□ 0.2
VARS-227ENST00000489979 NMIQ13287 307 aaPredicted RBP16.32■□□□□ 0.2
VARS-227ENST00000489979 LAMC2Q13753 1193 aa16.32■□□□□ 0.2
VARS-227ENST00000489979 ANKRD45Q5TZF3 282 aa16.32■□□□□ 0.2
VARS-227ENST00000489979 PTCRAQ6ISU1 281 aaPredicted RBP16.32■□□□□ 0.2
VARS-227ENST00000489979 DGKHQ86XP1 1220 aa16.32■□□□□ 0.2
VARS-227ENST00000489979 ADGRF4Q8IZF3 695 aa16.32■□□□□ 0.2
VARS-227ENST00000489979 PPTC7Q8NI37 304 aa16.32■□□□□ 0.2
VARS-227ENST00000489979 ZBTB47Q9UFB7 747 aaPredicted RBP16.32■□□□□ 0.2
VARS-227ENST00000489979 INSL6Q9Y581 213 aa16.32■□□□□ 0.2
VARS-227ENST00000489979 CCDC171Q6TFL3 1326 aa16.31■□□□□ 0.2
VARS-227ENST00000489979 PRR33A8MZF0 331 aa16.31■□□□□ 0.2
VARS-227ENST00000489979 EIF3JO75822 258 aaKnown RBP16.31■□□□□ 0.2
VARS-227ENST00000489979 NR3C2P08235 984 aa16.31■□□□□ 0.2
VARS-227ENST00000489979 PDE1AP54750 535 aa16.31■□□□□ 0.2
VARS-227ENST00000489979 HIC1Q14526 733 aa16.31■□□□□ 0.2
VARS-227ENST00000489979 QRICH1Q2TAL8 776 aa16.31■□□□□ 0.2
VARS-227ENST00000489979 DHX37Q8IY37 1157 aaKnown RBP16.31■□□□□ 0.2
VARS-227ENST00000489979 MYOCDQ8IZQ8 938 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms