RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CAPZA3Q96KX2 299 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 SLF1Q9BQI6 1058 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 LZTS2Q9BRK4 669 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 ARHGAP9Q9BRR9 750 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 ZWILCHQ9H900 591 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 TMBIM4Q9HC24 238 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 PANK4Q9NVE7 773 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 EVA1BQ9NVM1 165 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 STIM2Q9P246 746 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 ADD3Q9UEY8 706 aaKnown RBP5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 SWAP70Q9UH65 585 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 SLC12A4Q9UP95 1085 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 PHF24Q9UPV7 400 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 C2CD2Q9Y426 696 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 KIDINS220Q9ULH0 1771 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 ANKARQ7Z5J8 1434 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 MED1Q15648 1581 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 TET3O43151 1660 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 E7ENQ6 273 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 NRG2O14511 850 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 ENC1O14682 589 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 TLL1O43897 1013 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 NDUFA10O95299 355 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 KRT14P02533 472 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 PSMC4P43686 418 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 GNAQP50148 359 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 PLCD1P51178 756 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 ERVK-24P63145 666 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 KRT83P78385 493 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 FMR1Q06787 632 aaKnown RBP eCLIP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 BIRC3Q13489 604 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 MORC3Q14149 939 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 ITIH4Q14624 930 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 TAF11Q15544 211 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 PABPC1LQ4VXU2 614 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 ANKRD20A2Q5SQ80 823 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 ANKRD20A1Q5TYW2 823 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 ANKRD20A3Q5VUR7 823 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 ARMCX6Q7L4S7 300 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 DHX32Q7L7V1 743 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 TAS1R3Q7RTX0 852 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 CPLX4Q7Z7G2 160 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 PNMA8AQ86V59 439 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 SESTD1Q86VW0 696 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 GLYCTKQ8IVS8 523 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 SIX5Q8N196 739 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 SMCR8Q8TEV9 937 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 GTF3C2Q8WUA4 911 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 CCDC43Q96MW1 224 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 LRRC1Q9BTT6 524 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 AGXT2Q9BYV1 514 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 TRIM7Q9C029 511 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 RANBP17Q9H2T7 1088 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 RMI1Q9H9A7 625 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 SAMSN1Q9NSI8 373 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 ABHD10Q9NUJ1 306 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 PCMTD2Q9NV79 361 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 CWC25Q9NXE8 425 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 CTNNAL1Q9UBT7 734 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 DMGDHQ9UI17 866 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 MAN1B1Q9UKM7 699 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 IQSEC3Q9UPP2 1182 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 NOD1Q9Y239 953 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 PCDHB3Q9Y5E6 796 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 EMILIN1Q9Y6C2 1016 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 TAF6LQ9Y6J9 622 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 V9GY48 417 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 MED23Q9ULK4 1368 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 IFT172Q9UG01 1749 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 LRRC10BA6NIK2 292 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 N4BP3O15049 544 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 PRC1O43663 620 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 KRT86O43790 486 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 ORC4O43929 436 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 ICMTO60725 284 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 FLOT1O75955 427 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 GYPCP04921 128 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 POLR3DP05423 398 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 FDPSP14324 419 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 NQO1P15559 274 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 DRD4P21917 467 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 FXR1P51114 621 aaKnown RBP eCLIP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 COPS2P61201 443 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 EXOSC10Q01780 885 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 GUCY1B3Q02153 619 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 C2orf54Q08AI8 447 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 MYBPC3Q14896 1274 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 LONRF3Q496Y0 759 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 HSP90AA4PQ58FG1 418 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 CCDC122Q5T0U0 273 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 SLC9C2Q5TAH2 1124 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 KANK3Q6NY19 840 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 SHC4Q6S5L8 630 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 RUFY4Q6ZNE9 571 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 CCDC129Q6ZRS4 1044 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 LCA5Q86VQ0 697 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 CREG2Q8IUH2 290 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms