RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-222ENST00000489772 USP17L6PQ6QN14 398 aa12.76□□□□□ -0.37
GGA1-222ENST00000489772 ANKRD33Q7Z3H0 272 aa12.76□□□□□ -0.37
GGA1-222ENST00000489772 TOX2Q96NM4 488 aa12.76□□□□□ -0.37
GGA1-222ENST00000489772 LBHD1Q9BQE6 289 aaPredicted RBP12.76□□□□□ -0.37
GGA1-222ENST00000489772 MRVI1Q9Y6F6 885 aa12.76□□□□□ -0.37
GGA1-222ENST00000489772 DNAH12Q6ZR08 3092 aa12.76□□□□□ -0.37
GGA1-222ENST00000489772 FRMPD3Q5JV73 1810 aa12.76□□□□□ -0.37
GGA1-222ENST00000489772 SMCHD1A6NHR9 2005 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 DCDC2CA8MYV0 355 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 hCG_1984214I3L0E3 225 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 MEIS2O14770 477 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 ARIH2O95376 493 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 GH1P01241 217 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 CLTBP09497 229 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 MAGEA10P43363 369 aaPredicted RBP12.75□□□□□ -0.37
GGA1-222ENST00000489772 NAPAP54920 295 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 EVCP57679 992 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 ANAPC15P60006 121 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 LY6KQ17RY6 165 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 HABP4Q5JVS0 413 aaKnown RBP12.75□□□□□ -0.37
GGA1-222ENST00000489772 WWC2Q6AWC2 1192 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 PPP1R18Q6NYC8 613 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 CCDC62Q6P9F0 684 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 ZNF713Q8N859 430 aaPredicted RBP12.75□□□□□ -0.37
GGA1-222ENST00000489772 COPS5Q92905 334 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 GPKOWQ92917 476 aaPredicted RBP eCLIP12.75□□□□□ -0.37
GGA1-222ENST00000489772 SEZ6LQ9BYH1 1024 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 UPF3BQ9BZI7 483 aaKnown RBP12.75□□□□□ -0.37
GGA1-222ENST00000489772 PDRG1Q9NUG6 133 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 POLR3EQ9NVU0 708 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 RBM27Q9P2N5 1060 aaKnown RBP12.75□□□□□ -0.37
GGA1-222ENST00000489772 DDX41Q9UJV9 622 aaKnown RBP12.75□□□□□ -0.37
GGA1-222ENST00000489772 SSUH2Q9Y2M2 353 aa12.75□□□□□ -0.37
GGA1-222ENST00000489772 NID2Q14112 1375 aa12.74□□□□□ -0.37
GGA1-222ENST00000489772 FRMPD4Q14CM0 1322 aa12.74□□□□□ -0.37
GGA1-222ENST00000489772 C19orf67A6NJJ6 358 aa12.74□□□□□ -0.37
GGA1-222ENST00000489772 A6NJR5 290 aa12.74□□□□□ -0.37
GGA1-222ENST00000489772 SPDYE3A6NKU9 549 aa12.74□□□□□ -0.37
GGA1-222ENST00000489772 ARVCFO00192 962 aa12.74□□□□□ -0.37
GGA1-222ENST00000489772 KPNA6O60684 536 aa12.74□□□□□ -0.37
GGA1-222ENST00000489772 STAM2O75886 525 aa12.74□□□□□ -0.37
GGA1-222ENST00000489772 MYL3P08590 195 aa12.74□□□□□ -0.37
GGA1-222ENST00000489772 PDIA3P30101 505 aaKnown RBP12.74□□□□□ -0.37
GGA1-222ENST00000489772 BMP8BP34820 402 aa12.74□□□□□ -0.37
GGA1-222ENST00000489772 GNPTABQ3T906 1256 aa12.74□□□□□ -0.37
GGA1-222ENST00000489772 XRRA1Q6P2D8 792 aa12.74□□□□□ -0.37
GGA1-222ENST00000489772 TEX2Q8IWB9 1127 aa12.74□□□□□ -0.37
GGA1-222ENST00000489772 IL31RAQ8NI17 732 aa12.74□□□□□ -0.37
GGA1-222ENST00000489772 GDF15Q99988 308 aa12.74□□□□□ -0.37
GGA1-222ENST00000489772 LCTP09848 1927 aa12.73□□□□□ -0.37
GGA1-222ENST00000489772 TLR3O15455 904 aaKnown RBP12.73□□□□□ -0.37
GGA1-222ENST00000489772 TGFB3P10600 412 aa12.73□□□□□ -0.37
GGA1-222ENST00000489772 CDK7P50613 346 aa12.73□□□□□ -0.37
GGA1-222ENST00000489772 PURAQ00577 322 aaKnown RBP12.73□□□□□ -0.37
GGA1-222ENST00000489772 MDM2Q00987 491 aaPredicted RBP12.73□□□□□ -0.37
GGA1-222ENST00000489772 AKAP17AQ02040 695 aaKnown RBP12.73□□□□□ -0.37
GGA1-222ENST00000489772 MKRN4PQ13434 485 aaPredicted RBP12.73□□□□□ -0.37
GGA1-222ENST00000489772 ITGA7Q13683 1181 aa12.73□□□□□ -0.37
GGA1-222ENST00000489772 LAMC2Q13753 1193 aa12.73□□□□□ -0.37
GGA1-222ENST00000489772 TOB2Q14106 344 aaPredicted RBP12.73□□□□□ -0.37
GGA1-222ENST00000489772 PFKFB3Q16875 520 aaPredicted RBP12.73□□□□□ -0.37
GGA1-222ENST00000489772 EMID1Q96A84 441 aaPredicted RBP12.73□□□□□ -0.37
GGA1-222ENST00000489772 MTG1Q9BT17 334 aaPredicted RBP12.73□□□□□ -0.37
GGA1-222ENST00000489772 UBE2OQ9C0C9 1292 aaKnown RBP12.73□□□□□ -0.37
GGA1-222ENST00000489772 GLT8D2Q9H1C3 349 aa12.73□□□□□ -0.37
GGA1-222ENST00000489772 PRO3102Q9H379 93 aa12.73□□□□□ -0.37
GGA1-222ENST00000489772 PDLIM7Q9NR12 457 aa12.73□□□□□ -0.37
GGA1-222ENST00000489772 TMEM39AQ9NV64 488 aa12.73□□□□□ -0.37
GGA1-222ENST00000489772 BARHL2Q9NY43 387 aa12.73□□□□□ -0.37
GGA1-222ENST00000489772 A0A1W2PPC1 479 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 TRIM43BA6NCK2 446 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 SMCO2A6NFE2 343 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 STXBP3O00186 592 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 PRPF3O43395 683 aaKnown RBP12.72□□□□□ -0.37
GGA1-222ENST00000489772 RGS20O76081 388 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 ADCY7P51828 1080 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 PSMC6P62333 389 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 CCT2P78371 535 aaKnown RBP12.72□□□□□ -0.37
GGA1-222ENST00000489772 ARHGAP1Q07960 439 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 FAAP100Q0VG06 881 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 UBE2SQ16763 222 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 PCNX4Q63HM2 1172 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 SH3RF1Q7Z6J0 888 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 DHX37Q8IY37 1157 aaKnown RBP12.72□□□□□ -0.37
GGA1-222ENST00000489772 SLC43A3Q8NBI5 491 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 AFG1LQ8WV93 481 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 TRIM43Q96BQ3 446 aaPredicted RBP12.72□□□□□ -0.37
GGA1-222ENST00000489772 ZNF274Q96GC6 653 aaPredicted RBP12.72□□□□□ -0.37
GGA1-222ENST00000489772 ZFP91Q96JP5 570 aaPredicted RBP12.72□□□□□ -0.37
GGA1-222ENST00000489772 EHMT1Q9H9B1 1298 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 RIC8AQ9NPQ8 531 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 RTEL1Q9NZ71 1219 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 LRRC37A2A6NM11 1700 aa12.72□□□□□ -0.37
GGA1-222ENST00000489772 MCM3APO60318 1980 aa12.71□□□□□ -0.37
GGA1-222ENST00000489772 CPLX1O14810 134 aa12.71□□□□□ -0.37
GGA1-222ENST00000489772 KIAA0355O15063 1070 aa12.71□□□□□ -0.37
GGA1-222ENST00000489772 MMP3P08254 477 aa12.71□□□□□ -0.37
GGA1-222ENST00000489772 SCG2P13521 617 aa12.71□□□□□ -0.37
GGA1-222ENST00000489772 RAG1P15918 1043 aa12.71□□□□□ -0.37
GGA1-222ENST00000489772 IFNAR1P17181 557 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms