RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, human

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACTN4-206	ENST00000489451	FAM47C	Q5HY64	1035 aa		13.74	□□□□□ -0.21
ACTN4-206	ENST00000489451	SEPT14	Q6ZU15	432 aa		13.74	□□□□□ -0.21
ACTN4-206	ENST00000489451	IQCA1	Q86XH1	822 aa		13.74	□□□□□ -0.21
ACTN4-206	ENST00000489451	DHX38	Q92620	1227 aa	Known RBP	13.74	□□□□□ -0.21
ACTN4-206	ENST00000489451	SENP2	Q9HC62	589 aa		13.74	□□□□□ -0.21
ACTN4-206	ENST00000489451	SLC4A7	Q9Y6M7	1214 aa		13.74	□□□□□ -0.21
ACTN4-206	ENST00000489451	COL4A4	P53420	1690 aa	Predicted RBP	13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	EPOP	A6NHQ4	379 aa		13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	PITPNM1	O00562	1244 aa		13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	RGS20	O76081	388 aa		13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	SUPT20HL2	P0C7V6	817 aa		13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	BMP1	P13497	986 aa		13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	ATP2A2	P16615	1042 aa	Known RBP	13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	NT5C2	P49902	561 aa		13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	GHRHR	Q02643	423 aa		13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	AAK1	Q2M2I8	961 aa		13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	TCTN1	Q2MV58	587 aa		13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	GDF6	Q6KF10	455 aa	Predicted RBP	13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	SPRED2	Q7Z698	418 aa		13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	RPUSD2	Q8IZ73	545 aa	Known RBP	13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	MTIF3	Q9H2K0	278 aa	Known RBP	13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	MAD2L2	Q9UI95	211 aa		13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	PCDHA11	Q9Y5I1	949 aa		13.73	□□□□□ -0.21
ACTN4-206	ENST00000489451	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	RAD50	Q92878	1312 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	ZBBX	A8MT70	800 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	RFXAP	O00287	272 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	KPNA6	O60684	536 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	PFKM	P08237	780 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	PARP1	P09874	1014 aa	Known RBP	13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	EIF2AK2	P19525	551 aa	Known RBP	13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	HSD17B4	P51659	736 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	PTPN11	Q06124	597 aa	Predicted RBP	13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	HIC1	Q14526	733 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	IMMT	Q16891	758 aa	Known RBP	13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	CCDC178	Q5BJE1	867 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	SESTD1	Q86VW0	696 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	FBXO11	Q86XK2	927 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	IL31RA	Q8NI17	732 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	NSUN6	Q8TEA1	469 aa	Known RBP	13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	WNT8B	Q93098	351 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	RMDN3	Q96TC7	470 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	MAF1	Q9H063	256 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	SLC28A3	Q9HAS3	691 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	VAT1L	Q9HCJ6	419 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	GPHN	Q9NQX3	736 aa	Predicted RBP	13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	PXMP2	Q9NR77	195 aa		13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	DDX41	Q9UJV9	622 aa	Known RBP	13.72	□□□□□ -0.21
ACTN4-206	ENST00000489451	PALM3	A6NDB9	673 aa	Predicted RBP	13.71	□□□□□ -0.21
ACTN4-206	ENST00000489451	HIP1	O00291	1037 aa		13.71	□□□□□ -0.21
ACTN4-206	ENST00000489451	CYTH3	O43739	400 aa		13.71	□□□□□ -0.21
ACTN4-206	ENST00000489451	GH1	P01241	217 aa		13.71	□□□□□ -0.21
ACTN4-206	ENST00000489451	CA3	P07451	260 aa		13.71	□□□□□ -0.21
ACTN4-206	ENST00000489451	PTH1R	Q03431	593 aa		13.71	□□□□□ -0.21
ACTN4-206	ENST00000489451	TTC22	Q5TAA0	569 aa		13.71	□□□□□ -0.21
ACTN4-206	ENST00000489451	PPP2R2D	Q66LE6	453 aa		13.71	□□□□□ -0.21
ACTN4-206	ENST00000489451	TRAF7	Q6Q0C0	670 aa		13.71	□□□□□ -0.21
ACTN4-206	ENST00000489451	IWS1	Q96ST2	819 aa		13.71	□□□□□ -0.21
ACTN4-206	ENST00000489451	MPHOSPH6	Q99547	160 aa	Known RBP	13.71	□□□□□ -0.21
ACTN4-206	ENST00000489451	KRT23	Q9C075	422 aa		13.71	□□□□□ -0.21
ACTN4-206	ENST00000489451	C11orf16	Q9NQ32	467 aa		13.71	□□□□□ -0.21
ACTN4-206	ENST00000489451	MRPL11	Q9Y3B7	192 aa	Known RBP	13.71	□□□□□ -0.21
ACTN4-206	ENST00000489451	DOCK5	Q9H7D0	1870 aa		13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	HAS3	O00219	553 aa		13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	CFB	P00751	764 aa		13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	NR3C2	P08235	984 aa		13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	CYP21A2	P08686	494 aa		13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	HOXD8	P13378	290 aa	Predicted RBP	13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	RFC2	P35250	354 aa		13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	KCNQ1	P51787	676 aa		13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	TFF2	Q03403	129 aa		13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	RBL2	Q08999	1139 aa		13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	STXBP2	Q15833	593 aa		13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	PTGIS	Q16647	500 aa		13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	TRIM71	Q2Q1W2	868 aa	Known RBP	13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	BRDT	Q58F21	947 aa	Predicted RBP	13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	IFIT1B	Q5T764	474 aa	Known RBP	13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	STOX1	Q6ZVD7	989 aa		13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	CHST3	Q7LGC8	479 aa		13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	EMID1	Q96A84	441 aa	Predicted RBP	13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	PDCD2L	Q9BRP1	358 aa		13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451	GTF2IRD1	Q9UHL9	959 aa		13.7	□□□□□ -0.22
ACTN4-206	ENST00000489451		B4DLN1	442 aa		13.69	□□□□□ -0.22
ACTN4-206	ENST00000489451	KLRF2	D3W0D1	207 aa		13.69	□□□□□ -0.22
ACTN4-206	ENST00000489451	NBN	O60934	754 aa		13.69	□□□□□ -0.22
ACTN4-206	ENST00000489451	F2	P00734	622 aa		13.69	□□□□□ -0.22
ACTN4-206	ENST00000489451	ZNF286B	P0CG31	522 aa		13.69	□□□□□ -0.22
ACTN4-206	ENST00000489451	HOXA13	P31271	388 aa	Predicted RBP	13.69	□□□□□ -0.22
ACTN4-206	ENST00000489451	MRPL12	P52815	198 aa	Known RBP	13.69	□□□□□ -0.22
ACTN4-206	ENST00000489451	CHMP4BP1	P59074	171 aa		13.69	□□□□□ -0.22
ACTN4-206	ENST00000489451	SP2	Q02086	613 aa		13.69	□□□□□ -0.22
ACTN4-206	ENST00000489451	TAP1	Q03518	808 aa		13.69	□□□□□ -0.22
ACTN4-206	ENST00000489451	COL9A3	Q14050	684 aa	Predicted RBP	13.69	□□□□□ -0.22
ACTN4-206	ENST00000489451	ARHGEF16	Q5VV41	709 aa		13.69	□□□□□ -0.22
ACTN4-206	ENST00000489451	KRT40	Q6A162	431 aa		13.69	□□□□□ -0.22
ACTN4-206	ENST00000489451	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.69	□□□□□ -0.22
ACTN4-206	ENST00000489451	MCF2L2	Q86YR7	1114 aa		13.69	□□□□□ -0.22
ACTN4-206	ENST00000489451	MICALL1	Q8N3F8	863 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms