RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 CTAGE5O15320 804 aa15.39■□□□□ 0.05
CCL28-202ENST00000489442 ANAPC15P60006 121 aa15.39■□□□□ 0.05
CCL28-202ENST00000489442 CCT2P78371 535 aaKnown RBP15.39■□□□□ 0.05
CCL28-202ENST00000489442 TLE2Q04725 743 aa15.39■□□□□ 0.05
CCL28-202ENST00000489442 SNX17Q15036 470 aa15.39■□□□□ 0.05
CCL28-202ENST00000489442 LY6KQ17RY6 165 aa15.39■□□□□ 0.05
CCL28-202ENST00000489442 WWC2Q6AWC2 1192 aa15.39■□□□□ 0.05
CCL28-202ENST00000489442 COPS5Q92905 334 aa15.39■□□□□ 0.05
CCL28-202ENST00000489442 LBHD1Q9BQE6 289 aaPredicted RBP15.39■□□□□ 0.05
CCL28-202ENST00000489442 POLR3EQ9NVU0 708 aa15.39■□□□□ 0.05
CCL28-202ENST00000489442 RANBP2P49792 3224 aaKnown RBP15.38■□□□□ 0.05
CCL28-202ENST00000489442 SPDYE3A6NKU9 549 aa15.38■□□□□ 0.05
CCL28-202ENST00000489442 hCG_1984214I3L0E3 225 aa15.38■□□□□ 0.05
CCL28-202ENST00000489442 MEIS2O14770 477 aa15.38■□□□□ 0.05
CCL28-202ENST00000489442 ARIH2O95376 493 aa15.38■□□□□ 0.05
CCL28-202ENST00000489442 GH1P01241 217 aa15.38■□□□□ 0.05
CCL28-202ENST00000489442 MYL3P08590 195 aa15.38■□□□□ 0.05
CCL28-202ENST00000489442 PDIA3P30101 505 aaKnown RBP15.38■□□□□ 0.05
CCL28-202ENST00000489442 FUT2Q10981 343 aa15.38■□□□□ 0.05
CCL28-202ENST00000489442 TOB2Q14106 344 aaPredicted RBP15.38■□□□□ 0.05
CCL28-202ENST00000489442 GNPTABQ3T906 1256 aa15.38■□□□□ 0.05
CCL28-202ENST00000489442 KCNV1Q6PIU1 500 aa15.38■□□□□ 0.05
CCL28-202ENST00000489442 ZNF713Q8N859 430 aaPredicted RBP15.38■□□□□ 0.05
CCL28-202ENST00000489442 ZFP91Q96JP5 570 aaPredicted RBP15.38■□□□□ 0.05
CCL28-202ENST00000489442 RBM27Q9P2N5 1060 aaKnown RBP15.38■□□□□ 0.05
CCL28-202ENST00000489442 MROH7Q68CQ1 1323 aa15.37■□□□□ 0.05
CCL28-202ENST00000489442 ARVCFO00192 962 aa15.37■□□□□ 0.05
CCL28-202ENST00000489442 CPLX1O14810 134 aa15.37■□□□□ 0.05
CCL28-202ENST00000489442 UBE2SQ16763 222 aa15.37■□□□□ 0.05
CCL28-202ENST00000489442 PPP1R18Q6NYC8 613 aa15.37■□□□□ 0.05
CCL28-202ENST00000489442 CCDC62Q6P9F0 684 aa15.37■□□□□ 0.05
CCL28-202ENST00000489442 DHX37Q8IY37 1157 aaKnown RBP15.37■□□□□ 0.05
CCL28-202ENST00000489442 IL31RAQ8NI17 732 aa15.37■□□□□ 0.05
CCL28-202ENST00000489442 LARP6Q9BRS8 491 aaKnown RBP15.37■□□□□ 0.05
CCL28-202ENST00000489442 EHMT1Q9H9B1 1298 aa15.37■□□□□ 0.05
CCL28-202ENST00000489442 SMCO2A6NFE2 343 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 TLR3O15455 904 aaKnown RBP15.36■□□□□ 0.05
CCL28-202ENST00000489442 KPNA6O60684 536 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 STAM2O75886 525 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 CLTBP09497 229 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 TGFB3P10600 412 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 SCG2P13521 617 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 ADCY7P51828 1080 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 EVCP57679 992 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 MDM2Q00987 491 aaPredicted RBP15.36■□□□□ 0.05
CCL28-202ENST00000489442 STK3Q13188 491 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 ITGA7Q13683 1181 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 XRRA1Q6P2D8 792 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 CPLX2Q6PUV4 134 aaKnown RBP15.36■□□□□ 0.05
CCL28-202ENST00000489442 PHKBQ93100 1093 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 ZNF274Q96GC6 653 aaPredicted RBP15.36■□□□□ 0.05
CCL28-202ENST00000489442 TOX2Q96NM4 488 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 SLC26A6Q9BXS9 759 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 GLT8D2Q9H1C3 349 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 NCOA5Q9HCD5 579 aaKnown RBP15.36■□□□□ 0.05
CCL28-202ENST00000489442 TMEM39AQ9NV64 488 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 BARHL2Q9NY43 387 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 RTEL1Q9NZ71 1219 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 DDX41Q9UJV9 622 aaKnown RBP15.36■□□□□ 0.05
CCL28-202ENST00000489442 NID2Q14112 1375 aa15.36■□□□□ 0.05
CCL28-202ENST00000489442 A6NJR5 290 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 STXBP3O00186 592 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 PRPF3O43395 683 aaKnown RBP15.35■□□□□ 0.05
CCL28-202ENST00000489442 SEC24BO95487 1268 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 MAGEA10P43363 369 aaPredicted RBP15.35■□□□□ 0.05
CCL28-202ENST00000489442 CHMP4BP1P59074 171 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 PSMC6P62333 389 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 LAMC2Q13753 1193 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 ANKRD1Q15327 319 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 PFKFB3Q16875 520 aaPredicted RBP15.35■□□□□ 0.05
CCL28-202ENST00000489442 HABP4Q5JVS0 413 aaKnown RBP15.35■□□□□ 0.05
CCL28-202ENST00000489442 PCNX4Q63HM2 1172 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 ANKRD33Q7Z3H0 272 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 TRIM22Q8IYM9 498 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 CCDC12Q8WUD4 166 aaPredicted RBP15.35■□□□□ 0.05
CCL28-202ENST00000489442 AFG1LQ8WV93 481 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 MTG1Q9BT17 334 aaPredicted RBP15.35■□□□□ 0.05
CCL28-202ENST00000489442 SEZ6LQ9BYH1 1024 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 RIC8AQ9NPQ8 531 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 PDLIM7Q9NR12 457 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 PCDHA6Q9UN73 950 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 PCDHA8Q9Y5H6 950 aa15.35■□□□□ 0.05
CCL28-202ENST00000489442 FRMPD4Q14CM0 1322 aa15.34■□□□□ 0.05
CCL28-202ENST00000489442 PPFIA3O75145 1194 aa15.34■□□□□ 0.05
CCL28-202ENST00000489442 RGS20O76081 388 aa15.34■□□□□ 0.05
CCL28-202ENST00000489442 RAG1P15918 1043 aa15.34■□□□□ 0.05
CCL28-202ENST00000489442 IFNAR1P17181 557 aa15.34■□□□□ 0.05
CCL28-202ENST00000489442 CDK7P50613 346 aa15.34■□□□□ 0.05
CCL28-202ENST00000489442 MRPS9P82933 396 aaKnown RBP15.34■□□□□ 0.05
CCL28-202ENST00000489442 PURAQ00577 322 aaKnown RBP15.34■□□□□ 0.05
CCL28-202ENST00000489442 ARHGAP1Q07960 439 aa15.34■□□□□ 0.05
CCL28-202ENST00000489442 SSRP1Q08945 709 aaKnown RBP15.34■□□□□ 0.05
CCL28-202ENST00000489442 SH3RF1Q7Z6J0 888 aa15.34■□□□□ 0.05
CCL28-202ENST00000489442 NLRX1Q86UT6 975 aa15.34■□□□□ 0.05
CCL28-202ENST00000489442 TEX2Q8IWB9 1127 aa15.34■□□□□ 0.05
CCL28-202ENST00000489442 GDF15Q99988 308 aa15.34■□□□□ 0.05
CCL28-202ENST00000489442 RNF26Q9BY78 433 aaPredicted RBP15.34■□□□□ 0.05
CCL28-202ENST00000489442 UBE2OQ9C0C9 1292 aaKnown RBP15.34■□□□□ 0.05
CCL28-202ENST00000489442 MLXIPQ9HAP2 919 aa15.34■□□□□ 0.05
CCL28-202ENST00000489442 SORBS3O60504 671 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms