RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 NOL8Q76FK4 1167 aaKnown RBP9.34□□□□□ -0.91
EXOSC3-206ENST00000489414 NELL1Q92832 810 aa9.34□□□□□ -0.91
EXOSC3-206ENST00000489414 TOP1MTQ969P6 601 aa9.34□□□□□ -0.91
EXOSC3-206ENST00000489414 ATG4CQ96DT6 458 aa9.34□□□□□ -0.91
EXOSC3-206ENST00000489414 SCNM1Q9BWG6 230 aa9.34□□□□□ -0.91
EXOSC3-206ENST00000489414 POMKQ9H5K3 350 aa9.34□□□□□ -0.91
EXOSC3-206ENST00000489414 MROH7-TTC4A0A0A0MT08 1334 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 LAMA1P25391 3075 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 CREBBPQ92793 2442 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 TK2O00142 265 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 DYNC1LI2O43237 492 aaPredicted RBP9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 CCR10P46092 362 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 EMP3P54852 163 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 PURAQ00577 322 aaKnown RBP9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 RBL2Q08999 1139 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 FAM47CQ5HY64 1035 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 NFRKBQ6P4R8 1299 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 SYCE2Q6PIF2 218 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 ARMCX2Q7L311 632 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 CCDC155Q8N6L0 562 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 CLP1Q92989 425 aaKnown RBP9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 FGD4Q96M96 766 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 CTAGE1Q96RT6 745 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 TANGO6Q9C0B7 1094 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 AP5M1Q9H0R1 490 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 TBC1D17Q9HA65 648 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 GPR108Q9NPR9 543 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 ZSCAN32Q9NX65 697 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 CDH22Q9UJ99 828 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 ADAMTS8Q9UP79 889 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 PLAGL2Q9UPG8 496 aa9.33□□□□□ -0.92
EXOSC3-206ENST00000489414 FOXD2O60548 495 aaPredicted RBP9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 PDE8BO95263 885 aa9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 MAP4K4O95819 1239 aaPredicted RBP9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 CAPNS1P04632 268 aa9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 RETP07949 1114 aa9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 GLULP15104 373 aa9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 TDGQ13569 410 aa9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 LAIR1Q6GTX8 287 aa9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 PSAPL1Q6NUJ1 521 aa9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 ANKRD54Q6NXT1 300 aa9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 TMEM184AQ6ZMB5 413 aa9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 SLF2Q8IX21 1173 aa9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 FIBCD1Q8N539 461 aa9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 PLVAPQ9BX97 442 aa9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 DHX36Q9H2U1 1008 aaKnown RBP9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 SIT1Q9Y3P8 196 aa9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 ACACAQ13085 2346 aa9.32□□□□□ -0.92
EXOSC3-206ENST00000489414 FSD2A1L4K1 749 aa9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 FGFR2P21802 821 aa9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 PLCD1P51178 756 aa9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 PTPN11Q06124 597 aaPredicted RBP9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 KCNC3Q14003 757 aa9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 DZIP1Q86YF9 867 aaKnown RBP9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 FOXP4Q8IVH2 680 aaPredicted RBP9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 ZNF513Q8N8E2 541 aaPredicted RBP9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 TDRD5Q8NAT2 981 aaKnown RBP9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 PPP1R13LQ8WUF5 828 aa9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 DHX38Q92620 1227 aaKnown RBP9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 NECTIN4Q96NY8 510 aa9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 APOL5Q9BWW9 433 aa9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 MYH16Q9H6N6 1097 aa9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 TLE6Q9H808 572 aa9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 WNT16Q9UBV4 365 aa9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 NOD1Q9Y239 953 aa9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 Q9Y3F1 56 aa9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 SHROOM3Q8TF72 1996 aa9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 MIA3Q5JRA6 1907 aa9.31□□□□□ -0.92
EXOSC3-206ENST00000489414 WDR46O15213 610 aaKnown RBP9.3□□□□□ -0.92
EXOSC3-206ENST00000489414 CKBP12277 381 aa9.3□□□□□ -0.92
EXOSC3-206ENST00000489414 RFX1P22670 979 aa9.3□□□□□ -0.92
EXOSC3-206ENST00000489414 RIPK4P57078 832 aa9.3□□□□□ -0.92
EXOSC3-206ENST00000489414 TROAPQ12815 778 aa9.3□□□□□ -0.92
EXOSC3-206ENST00000489414 MBTPS1Q14703 1052 aa9.3□□□□□ -0.92
EXOSC3-206ENST00000489414 NEUROD2Q15784 382 aa9.3□□□□□ -0.92
EXOSC3-206ENST00000489414 TMEM63BQ5T3F8 832 aa9.3□□□□□ -0.92
EXOSC3-206ENST00000489414 PHLDB3Q6NSJ2 640 aa9.3□□□□□ -0.92
EXOSC3-206ENST00000489414 TRAF7Q6Q0C0 670 aa9.3□□□□□ -0.92
EXOSC3-206ENST00000489414 CCDC144CPQ8IYA2 1237 aa9.3□□□□□ -0.92
EXOSC3-206ENST00000489414 P2RX5Q93086 422 aa9.3□□□□□ -0.92
EXOSC3-206ENST00000489414 POLR3EQ9NVU0 708 aa9.3□□□□□ -0.92
EXOSC3-206ENST00000489414 ADAMTS5Q9UNA0 930 aa9.3□□□□□ -0.92
EXOSC3-206ENST00000489414 KIAA1671Q9BY89 1806 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 ENO4A6NNW6 628 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 PER2O15055 1255 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 FLOT1O75955 427 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 UPP2O95045 317 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 ITGB1P05556 798 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 IFIT1P09914 478 aaKnown RBP9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 COPB2P35606 906 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 STAT3P40763 770 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 CSTF1Q05048 431 aaKnown RBP9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 ZNF252P-AS1Q0IIN9 211 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 RAB3GAP1Q15042 981 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 PTGISQ16647 500 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 DUSP6Q16828 381 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 METTL24Q5JXM2 366 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 ZNF843Q8N446 348 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 FAM133AQ8N9E0 248 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 SPPL3Q8TCT6 385 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms