RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 KCNT2Q6UVM3 1135 aa5.76□□□□□ -1.49
RFC4-213ENST00000489028 NSMFQ6X4W1 530 aa5.76□□□□□ -1.49
RFC4-213ENST00000489028 FAM129CQ86XR2 697 aa5.76□□□□□ -1.49
RFC4-213ENST00000489028 PEX11GQ96HA9 241 aa5.76□□□□□ -1.49
RFC4-213ENST00000489028 PHF20Q9BVI0 1012 aa5.76□□□□□ -1.49
RFC4-213ENST00000489028 X6R8D5 127 aa5.76□□□□□ -1.49
RFC4-213ENST00000489028 ASXL2Q76L83 1435 aa5.75□□□□□ -1.49
RFC4-213ENST00000489028 SGSM2O43147 1006 aa5.75□□□□□ -1.49
RFC4-213ENST00000489028 FAM153BP0C7A2 387 aa5.75□□□□□ -1.49
RFC4-213ENST00000489028 CIAPIN1Q6FI81 312 aa5.75□□□□□ -1.49
RFC4-213ENST00000489028 RIOX2Q8IUF8 465 aa5.75□□□□□ -1.49
RFC4-213ENST00000489028 ALG3Q92685 438 aa5.75□□□□□ -1.49
RFC4-213ENST00000489028 DACT3Q96B18 629 aaPredicted RBP5.75□□□□□ -1.49
RFC4-213ENST00000489028 TRMT2BQ96GJ1 504 aaKnown RBP5.75□□□□□ -1.49
RFC4-213ENST00000489028 TMEM169Q96HH4 297 aa5.75□□□□□ -1.49
RFC4-213ENST00000489028 MYO1BO43795 1136 aa5.74□□□□□ -1.49
RFC4-213ENST00000489028 ZSCAN22P10073 491 aaPredicted RBP5.74□□□□□ -1.49
RFC4-213ENST00000489028 IFRD2Q12894 506 aaPredicted RBP5.74□□□□□ -1.49
RFC4-213ENST00000489028 LSAMPQ13449 338 aa5.74□□□□□ -1.49
RFC4-213ENST00000489028 FAM209AQ5JX71 171 aa5.74□□□□□ -1.49
RFC4-213ENST00000489028 DCP2Q8IU60 420 aaKnown RBP5.74□□□□□ -1.49
RFC4-213ENST00000489028 ZBTB38Q8NAP3 1195 aaPredicted RBP5.74□□□□□ -1.49
RFC4-213ENST00000489028 EXOC2Q96KP1 924 aa5.74□□□□□ -1.49
RFC4-213ENST00000489028 GPR27Q9NS67 375 aa5.74□□□□□ -1.49
RFC4-213ENST00000489028 CLDND1Q9NY35 253 aa5.74□□□□□ -1.49
RFC4-213ENST00000489028 NUDT5Q9UKK9 219 aa5.74□□□□□ -1.49
RFC4-213ENST00000489028 H7BY64 318 aa5.73□□□□□ -1.49
RFC4-213ENST00000489028 PLA2G1BP04054 148 aaKnown RBP5.73□□□□□ -1.49
RFC4-213ENST00000489028 SLC6A11P48066 632 aa5.73□□□□□ -1.49
RFC4-213ENST00000489028 GTF2A2P52657 109 aa5.73□□□□□ -1.49
RFC4-213ENST00000489028 SLC9A5Q14940 896 aa5.73□□□□□ -1.49
RFC4-213ENST00000489028 TARBP2Q15633 366 aaKnown RBP5.73□□□□□ -1.49
RFC4-213ENST00000489028 ZNF385BQ569K4 471 aa5.73□□□□□ -1.49
RFC4-213ENST00000489028 MROH9Q5TGP6 573 aa5.73□□□□□ -1.49
RFC4-213ENST00000489028 CNKSR3Q6P9H4 555 aa5.73□□□□□ -1.49
RFC4-213ENST00000489028 LRP10Q7Z4F1 713 aa5.73□□□□□ -1.49
RFC4-213ENST00000489028 ZSCAN18Q8TBC5 510 aaPredicted RBP5.73□□□□□ -1.49
RFC4-213ENST00000489028 DCAF4Q8WV16 495 aa5.73□□□□□ -1.49
RFC4-213ENST00000489028 CHAMP1Q96JM3 812 aa5.73□□□□□ -1.49
RFC4-213ENST00000489028 SRPK1Q96SB4 655 aaKnown RBP5.73□□□□□ -1.49
RFC4-213ENST00000489028 DNAJC7Q99615 494 aa5.73□□□□□ -1.49
RFC4-213ENST00000489028 SYT3Q9BQG1 590 aa5.73□□□□□ -1.49
RFC4-213ENST00000489028 RNF38Q9H0F5 515 aa5.73□□□□□ -1.49
RFC4-213ENST00000489028 PALD1Q9ULE6 856 aa5.73□□□□□ -1.49
RFC4-213ENST00000489028 KDM2BQ8NHM5 1336 aa5.73□□□□□ -1.49
RFC4-213ENST00000489028 RFXAPO00287 272 aa5.72□□□□□ -1.49
RFC4-213ENST00000489028 ZBTB7AO95365 584 aa5.72□□□□□ -1.49
RFC4-213ENST00000489028 C6orf222P0C671 652 aaPredicted RBP5.72□□□□□ -1.49
RFC4-213ENST00000489028 PFKLP17858 780 aa5.72□□□□□ -1.49
RFC4-213ENST00000489028 VMACQ2NL98 169 aa5.72□□□□□ -1.49
RFC4-213ENST00000489028 STYK1Q6J9G0 422 aa5.72□□□□□ -1.49
RFC4-213ENST00000489028 RSPO2Q6UXX9 243 aaPredicted RBP5.72□□□□□ -1.49
RFC4-213ENST00000489028 AMIGO3Q86WK7 504 aa5.72□□□□□ -1.49
RFC4-213ENST00000489028 SEC14L1Q92503 715 aa5.72□□□□□ -1.49
RFC4-213ENST00000489028 MKL1Q969V6 931 aa5.72□□□□□ -1.49
RFC4-213ENST00000489028 PWWP2AQ96N64 755 aa5.72□□□□□ -1.49
RFC4-213ENST00000489028 JAM3Q9BX67 310 aa5.72□□□□□ -1.49
RFC4-213ENST00000489028 TRAF6Q9Y4K3 522 aa5.72□□□□□ -1.49
RFC4-213ENST00000489028 TRBV23-1A0A0A0MS06 115 aa5.71□□□□□ -1.5
RFC4-213ENST00000489028 C8BP07358 591 aa5.71□□□□□ -1.5
RFC4-213ENST00000489028 NCAM1P13591 858 aa5.71□□□□□ -1.5
RFC4-213ENST00000489028 AFF3P51826 1226 aaKnown RBP5.71□□□□□ -1.5
RFC4-213ENST00000489028 FOXO4P98177 505 aa5.71□□□□□ -1.5
RFC4-213ENST00000489028 LBX2Q6XYB7 198 aa5.71□□□□□ -1.5
RFC4-213ENST00000489028 B3GNT8Q7Z7M8 397 aa5.71□□□□□ -1.5
RFC4-213ENST00000489028 MIB1Q86YT6 1006 aa5.71□□□□□ -1.5
RFC4-213ENST00000489028 SCUBE1Q8IWY4 988 aa5.71□□□□□ -1.5
RFC4-213ENST00000489028 FAM26EQ8N5C1 309 aa5.71□□□□□ -1.5
RFC4-213ENST00000489028 SMARCC2Q8TAQ2 1214 aa5.71□□□□□ -1.5
RFC4-213ENST00000489028 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.71□□□□□ -1.5
RFC4-213ENST00000489028 CPA5Q8WXQ8 436 aa5.71□□□□□ -1.5
RFC4-213ENST00000489028 NOX5Q96PH1 765 aa5.71□□□□□ -1.5
RFC4-213ENST00000489028 AP5M1Q9H0R1 490 aa5.71□□□□□ -1.5
RFC4-213ENST00000489028 OSBPL2Q9H1P3 480 aa5.71□□□□□ -1.5
RFC4-213ENST00000489028 COA3Q9Y2R0 106 aaPredicted RBP5.71□□□□□ -1.5
RFC4-213ENST00000489028 TADA3O75528 432 aa5.7□□□□□ -1.5
RFC4-213ENST00000489028 GPR85P60893 370 aa5.7□□□□□ -1.5
RFC4-213ENST00000489028 HTRA3P83110 453 aa5.7□□□□□ -1.5
RFC4-213ENST00000489028 RBM10P98175 930 aaKnown RBP5.7□□□□□ -1.5
RFC4-213ENST00000489028 CACNB2Q08289 660 aaPredicted RBP5.7□□□□□ -1.5
RFC4-213ENST00000489028 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
RFC4-213ENST00000489028 VWA3BQ502W6 1294 aa5.7□□□□□ -1.5
RFC4-213ENST00000489028 EMC4Q5J8M3 183 aa5.7□□□□□ -1.5
RFC4-213ENST00000489028 SOGA3Q5TF21 947 aa5.7□□□□□ -1.5
RFC4-213ENST00000489028 MILR1Q7Z6M3 343 aa5.7□□□□□ -1.5
RFC4-213ENST00000489028 SIAH1Q8IUQ4 282 aa5.7□□□□□ -1.5
RFC4-213ENST00000489028 LILRB2Q8N423 598 aa5.7□□□□□ -1.5
RFC4-213ENST00000489028 JMYQ8N9B5 988 aa5.7□□□□□ -1.5
RFC4-213ENST00000489028 TP53I13Q8NBR0 393 aaPredicted RBP5.7□□□□□ -1.5
RFC4-213ENST00000489028 FNIP1Q8TF40 1166 aa5.7□□□□□ -1.5
RFC4-213ENST00000489028 KISS1RQ969F8 398 aaPredicted RBP5.7□□□□□ -1.5
RFC4-213ENST00000489028 CDC6Q99741 560 aa5.7□□□□□ -1.5
RFC4-213ENST00000489028 EPB41L1Q9H4G0 881 aa5.7□□□□□ -1.5
RFC4-213ENST00000489028 TCRBV5S2A0A599 114 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 BTBD11A6QL63 1104 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 FFAR3O14843 346 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 TRIM13O60858 407 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 GRK2P25098 689 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 GRK3P35626 688 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 STAT5AP42229 794 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms