RNA–Protein interactions for RNA: ENST00000488986.1

SNRNP27-205, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 336 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-205ENST00000488986 SF3A1Q15459 793 aaKnown RBP6.21□□□□□ -1.42
SNRNP27-205ENST00000488986 DDR2Q16832 855 aa6.21□□□□□ -1.42
SNRNP27-205ENST00000488986 WWC2Q6AWC2 1192 aa6.21□□□□□ -1.42
SNRNP27-205ENST00000488986 NPM2Q86SE8 214 aaKnown RBP6.21□□□□□ -1.42
SNRNP27-205ENST00000488986 ZNF761Q86XN6 746 aaPredicted RBP6.21□□□□□ -1.42
SNRNP27-205ENST00000488986 CPA5Q8WXQ8 436 aa6.21□□□□□ -1.42
SNRNP27-205ENST00000488986 ZBTB8AQ96BR9 441 aa6.21□□□□□ -1.42
SNRNP27-205ENST00000488986 DDX11Q96FC9 970 aa6.21□□□□□ -1.42
SNRNP27-205ENST00000488986 SIT1Q9Y3P8 196 aa6.21□□□□□ -1.42
SNRNP27-205ENST00000488986 KLF4O43474 513 aa6.2□□□□□ -1.42
SNRNP27-205ENST00000488986 PAMP19021 973 aa6.2□□□□□ -1.42
SNRNP27-205ENST00000488986 RAB33AQ14088 237 aa6.2□□□□□ -1.42
SNRNP27-205ENST00000488986 MRM1Q6IN84 353 aaKnown RBP6.2□□□□□ -1.42
SNRNP27-205ENST00000488986 TRIM59Q8IWR1 403 aa6.2□□□□□ -1.42
SNRNP27-205ENST00000488986 ZNF513Q8N8E2 541 aaPredicted RBP6.2□□□□□ -1.42
SNRNP27-205ENST00000488986 MICAL1Q8TDZ2 1067 aa6.2□□□□□ -1.42
SNRNP27-205ENST00000488986 USP33Q8TEY7 942 aa6.2□□□□□ -1.42
SNRNP27-205ENST00000488986 PALD1Q9ULE6 856 aa6.2□□□□□ -1.42
SNRNP27-205ENST00000488986 NPHP3-ACAD11A0A0J9YXS1 232 aa6.19□□□□□ -1.42
SNRNP27-205ENST00000488986 C7orf72A4D263 438 aa6.19□□□□□ -1.42
SNRNP27-205ENST00000488986 ZBTB7AO95365 584 aa6.19□□□□□ -1.42
SNRNP27-205ENST00000488986 MAGEA10P43363 369 aaPredicted RBP6.19□□□□□ -1.42
SNRNP27-205ENST00000488986 SCRN1Q12765 414 aa6.19□□□□□ -1.42
SNRNP27-205ENST00000488986 GTF2IRD2BQ6EKJ0 949 aa6.19□□□□□ -1.42
SNRNP27-205ENST00000488986 GTF2IRD2Q86UP8 949 aa6.19□□□□□ -1.42
SNRNP27-205ENST00000488986 CELF2-AS1Q8N7Q2 184 aa6.19□□□□□ -1.42
SNRNP27-205ENST00000488986 SYT3Q9BQG1 590 aa6.19□□□□□ -1.42
SNRNP27-205ENST00000488986 HIRIP3Q9BW71 556 aaPredicted RBP6.19□□□□□ -1.42
SNRNP27-205ENST00000488986 MYRFQ9Y2G1 1151 aa6.19□□□□□ -1.42
SNRNP27-205ENST00000488986 FUCA1P04066 466 aa6.18□□□□□ -1.42
SNRNP27-205ENST00000488986 NTRK1P04629 796 aa6.18□□□□□ -1.42
SNRNP27-205ENST00000488986 ITGB3P05106 788 aa6.18□□□□□ -1.42
SNRNP27-205ENST00000488986 ITGAVP06756 1048 aa6.18□□□□□ -1.42
SNRNP27-205ENST00000488986 C8BP07358 591 aa6.18□□□□□ -1.42
SNRNP27-205ENST00000488986 TTLL7Q6ZT98 887 aa6.18□□□□□ -1.42
SNRNP27-205ENST00000488986 ZNF227Q86WZ6 799 aa6.18□□□□□ -1.42
SNRNP27-205ENST00000488986 ADAMTS17Q8TE56 1095 aa6.18□□□□□ -1.42
SNRNP27-205ENST00000488986 ARMC5Q96C12 935 aa6.18□□□□□ -1.42
SNRNP27-205ENST00000488986 MRGPRX3Q96LB0 322 aa6.18□□□□□ -1.42
SNRNP27-205ENST00000488986 GORASP1Q9BQQ3 440 aa6.18□□□□□ -1.42
SNRNP27-205ENST00000488986 CYP26B1Q9NR63 512 aa6.18□□□□□ -1.42
SNRNP27-205ENST00000488986 SMPD4Q9NXE4 827 aa6.18□□□□□ -1.42
SNRNP27-205ENST00000488986 IQCA1LA6NCM1 817 aa6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 SMARCA5O60264 1052 aaPredicted RBP6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 NPHS1O60500 1241 aa6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 CYP2C8P10632 490 aa6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 ADAM17P78536 824 aa6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 SLC10A6Q3KNW5 377 aa6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 NBPF6Q5VWK0 638 aa6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 MBLAC2Q68D91 279 aa6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 LINC00482Q8N8I6 264 aa6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 BTN2A2Q8WVV5 523 aa6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 NBPF4Q96M43 638 aa6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 RBM15Q96T37 977 aaKnown RBP eCLIP6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 LGR4Q9BXB1 951 aa6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 NKX2-4Q9H2Z4 354 aa6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 CLEC1BQ9P126 229 aa6.17□□□□□ -1.42
SNRNP27-205ENST00000488986 SNRPB2P08579 225 aaKnown RBP6.16□□□□□ -1.42
SNRNP27-205ENST00000488986 HOXC12P31275 282 aa6.16□□□□□ -1.42
SNRNP27-205ENST00000488986 KCNJ6P48051 423 aa6.16□□□□□ -1.42
SNRNP27-205ENST00000488986 PLEKHO2Q8TD55 490 aa6.16□□□□□ -1.42
SNRNP27-205ENST00000488986 CCDC140Q96MF4 163 aa6.16□□□□□ -1.42
SNRNP27-205ENST00000488986 CPP00450 1065 aa6.15□□□□□ -1.42
SNRNP27-205ENST00000488986 PLS3P13797 630 aa6.15□□□□□ -1.42
SNRNP27-205ENST00000488986 THBS2P35442 1172 aa6.15□□□□□ -1.42
SNRNP27-205ENST00000488986 ECI1P42126 302 aa6.15□□□□□ -1.42
SNRNP27-205ENST00000488986 RGL3Q3MIN7 710 aa6.15□□□□□ -1.42
SNRNP27-205ENST00000488986 SOGA3Q5TF21 947 aa6.15□□□□□ -1.42
SNRNP27-205ENST00000488986 FAM26EQ8N5C1 309 aa6.15□□□□□ -1.42
SNRNP27-205ENST00000488986 ST13P5Q8NFI4 369 aaPredicted RBP6.15□□□□□ -1.42
SNRNP27-205ENST00000488986 COPS5Q92905 334 aa6.15□□□□□ -1.42
SNRNP27-205ENST00000488986 C11orf84Q9BUA3 381 aaPredicted RBP6.15□□□□□ -1.42
SNRNP27-205ENST00000488986 GPRC5CQ9NQ84 441 aa6.15□□□□□ -1.42
SNRNP27-205ENST00000488986 MARCH2Q9P0N8 246 aa6.15□□□□□ -1.42
SNRNP27-205ENST00000488986 SIRPGQ9P1W8 387 aa6.15□□□□□ -1.42
SNRNP27-205ENST00000488986 CCDC85CA6NKD9 419 aa6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 TBX1O43435 398 aa6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 THBDP07204 575 aa6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 TNFRSF1AP19438 455 aa6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 HSP90AA2PQ14568 343 aaPredicted RBP6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 TBC1D10BQ4KMP7 808 aaPredicted RBP6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 IQCEQ6IPM2 695 aa6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 ETV3LQ6ZN32 361 aa6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 STK32CQ86UX6 486 aa6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 DCP2Q8IU60 420 aaKnown RBP6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 SREK1Q8WXA9 508 aaKnown RBP6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 DPF3Q92784 378 aa6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 SGSM3Q96HU1 749 aa6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 MMP19Q99542 508 aa6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 KRTAP3-1Q9BYR8 98 aa6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 BTG4Q9NY30 223 aa6.14□□□□□ -1.43
SNRNP27-205ENST00000488986 MEFVO15553 781 aaPredicted RBP6.13□□□□□ -1.43
SNRNP27-205ENST00000488986 SGSM2O43147 1006 aa6.13□□□□□ -1.43
SNRNP27-205ENST00000488986 RPL13P26373 211 aaKnown RBP6.13□□□□□ -1.43
SNRNP27-205ENST00000488986 PPP2R2AP63151 447 aa6.13□□□□□ -1.43
SNRNP27-205ENST00000488986 E4F1Q66K89 784 aaPredicted RBP6.13□□□□□ -1.43
SNRNP27-205ENST00000488986 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
SNRNP27-205ENST00000488986 CD300LDQ6UXZ3 194 aa6.13□□□□□ -1.43
SNRNP27-205ENST00000488986 TEX2Q8IWB9 1127 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms