RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 KAT2BQ92831 832 aa22.26■■□□□ 1.15
GGPS1-206ENST00000488594 HLA-CQ95604 372 aa22.26■■□□□ 1.15
GGPS1-206ENST00000488594 RILPL2Q969X0 211 aa22.26■■□□□ 1.15
GGPS1-206ENST00000488594 EMID1Q96A84 441 aaPredicted RBP22.26■■□□□ 1.15
GGPS1-206ENST00000488594 TAAR1Q96RJ0 339 aa22.26■■□□□ 1.15
GGPS1-206ENST00000488594 KATNAL1Q9BW62 490 aa22.26■■□□□ 1.15
GGPS1-206ENST00000488594 CPVLQ9H3G5 476 aa22.26■■□□□ 1.15
GGPS1-206ENST00000488594 GTF2IRD1Q9UHL9 959 aa22.26■■□□□ 1.15
GGPS1-206ENST00000488594 MRPL11Q9Y3B7 192 aaKnown RBP22.26■■□□□ 1.15
GGPS1-206ENST00000488594 BDP1A6H8Y1 2624 aa22.26■■□□□ 1.15
GGPS1-206ENST00000488594 EFCAB14O75071 495 aa22.25■■□□□ 1.15
GGPS1-206ENST00000488594 EIF3JO75822 258 aaKnown RBP22.25■■□□□ 1.15
GGPS1-206ENST00000488594 GRB10Q13322 594 aa22.25■■□□□ 1.15
GGPS1-206ENST00000488594 C7orf31Q8N865 590 aa22.25■■□□□ 1.15
GGPS1-206ENST00000488594 TBC1D5Q92609 795 aa22.25■■□□□ 1.15
GGPS1-206ENST00000488594 ZBED2Q9BTP6 218 aa22.25■■□□□ 1.15
GGPS1-206ENST00000488594 LMCD1Q9NZU5 365 aa22.25■■□□□ 1.15
GGPS1-206ENST00000488594 COL20A1Q9P218 1284 aa22.25■■□□□ 1.15
GGPS1-206ENST00000488594 ABHD14A-ACY1A0A1B0GW23 586 aa22.25■■□□□ 1.15
GGPS1-206ENST00000488594 CXCL10P02778 98 aa22.25■■□□□ 1.15
GGPS1-206ENST00000488594 GPNMBQ14956 572 aa22.25■■□□□ 1.15
GGPS1-206ENST00000488594 ARHGEF16Q5VV41 709 aa22.25■■□□□ 1.15
GGPS1-206ENST00000488594 KRT40Q6A162 431 aa22.25■■□□□ 1.15
GGPS1-206ENST00000488594 CHST3Q7LGC8 479 aa22.25■■□□□ 1.15
GGPS1-206ENST00000488594 RAPGEFL1Q9UHV5 662 aa22.25■■□□□ 1.15
GGPS1-206ENST00000488594 DDX41Q9UJV9 622 aaKnown RBP22.25■■□□□ 1.15
GGPS1-206ENST00000488594 XIRP2A4UGR9 3374 aa22.24■■□□□ 1.15
GGPS1-206ENST00000488594 KDM4AO75164 1064 aa22.24■■□□□ 1.15
GGPS1-206ENST00000488594 CKBP12277 381 aa22.24■■□□□ 1.15
GGPS1-206ENST00000488594 SDSP20132 328 aa22.24■■□□□ 1.15
GGPS1-206ENST00000488594 LAMC2Q13753 1193 aa22.24■■□□□ 1.15
GGPS1-206ENST00000488594 QRICH1Q2TAL8 776 aa22.24■■□□□ 1.15
GGPS1-206ENST00000488594 FBXO11Q86XK2 927 aa22.24■■□□□ 1.15
GGPS1-206ENST00000488594 PPTC7Q8NI37 304 aa22.24■■□□□ 1.15
GGPS1-206ENST00000488594 DHX38Q92620 1227 aaKnown RBP22.24■■□□□ 1.15
GGPS1-206ENST00000488594 ZSCAN10Q96SZ4 725 aaPredicted RBP22.24■■□□□ 1.15
GGPS1-206ENST00000488594 TRANK1O15050 2925 aa22.23■■□□□ 1.15
GGPS1-206ENST00000488594 DHX16O60231 1041 aaKnown RBP22.23■■□□□ 1.15
GGPS1-206ENST00000488594 LPXNO60711 386 aa22.23■■□□□ 1.15
GGPS1-206ENST00000488594 PARP1P09874 1014 aaKnown RBP22.23■■□□□ 1.15
GGPS1-206ENST00000488594 PLA2G5P39877 138 aa22.23■■□□□ 1.15
GGPS1-206ENST00000488594 PTK7Q13308 1070 aa22.23■■□□□ 1.15
GGPS1-206ENST00000488594 CRBNQ96SW2 442 aa22.23■■□□□ 1.15
GGPS1-206ENST00000488594 LNPKQ9C0E8 428 aa22.23■■□□□ 1.15
GGPS1-206ENST00000488594 HDAC6Q9UBN7 1215 aa22.23■■□□□ 1.15
GGPS1-206ENST00000488594 MRVI1Q9Y6F6 885 aa22.23■■□□□ 1.15
GGPS1-206ENST00000488594 NBNO60934 754 aa22.22■■□□□ 1.15
GGPS1-206ENST00000488594 GJB5O95377 273 aa22.22■■□□□ 1.15
GGPS1-206ENST00000488594 F2P00734 622 aa22.22■■□□□ 1.15
GGPS1-206ENST00000488594 NR3C2P08235 984 aa22.22■■□□□ 1.15
GGPS1-206ENST00000488594 EIF2AK2P19525 551 aaKnown RBP22.22■■□□□ 1.15
GGPS1-206ENST00000488594 PSEN2P49810 448 aa22.22■■□□□ 1.15
GGPS1-206ENST00000488594 MFSD10Q14728 455 aa22.22■■□□□ 1.15
GGPS1-206ENST00000488594 ENAHQ8N8S7 591 aaPredicted RBP22.22■■□□□ 1.15
GGPS1-206ENST00000488594 RAD9AQ99638 391 aa22.22■■□□□ 1.15
GGPS1-206ENST00000488594 PXMP2Q9NR77 195 aa22.22■■□□□ 1.15
GGPS1-206ENST00000488594 LCHNA4D1U4 455 aa22.21■■□□□ 1.15
GGPS1-206ENST00000488594 DEFB103AP81534 67 aa22.21■■□□□ 1.15
GGPS1-206ENST00000488594 IKBKEQ14164 716 aa22.21■■□□□ 1.15
GGPS1-206ENST00000488594 DHX37Q8IY37 1157 aaKnown RBP22.21■■□□□ 1.15
GGPS1-206ENST00000488594 FAM122AQ96E09 287 aa22.21■■□□□ 1.15
GGPS1-206ENST00000488594 JMJD4Q9H9V9 463 aa22.21■■□□□ 1.15
GGPS1-206ENST00000488594 MAP3K20Q9NYL2 800 aaKnown RBP22.21■■□□□ 1.15
GGPS1-206ENST00000488594 TET1Q8NFU7 2136 aa22.2■■□□□ 1.15
GGPS1-206ENST00000488594 TCF20Q9UGU0 1960 aaKnown RBP22.2■■□□□ 1.14
GGPS1-206ENST00000488594 B4E1Z4 1266 aa22.2■■□□□ 1.14
GGPS1-206ENST00000488594 HAS3O00219 553 aa22.2■■□□□ 1.14
GGPS1-206ENST00000488594 HSD17B4P51659 736 aa22.2■■□□□ 1.14
GGPS1-206ENST00000488594 GHRHRQ02643 423 aa22.2■■□□□ 1.14
GGPS1-206ENST00000488594 AAMPQ13685 434 aa22.2■■□□□ 1.14
GGPS1-206ENST00000488594 KIAA0753Q2KHM9 967 aa22.2■■□□□ 1.14
GGPS1-206ENST00000488594 KCNV1Q6PIU1 500 aa22.2■■□□□ 1.14
GGPS1-206ENST00000488594 ALG1Q9BT22 464 aa22.2■■□□□ 1.14
GGPS1-206ENST00000488594 AMNQ9BXJ7 453 aa22.2■■□□□ 1.14
GGPS1-206ENST00000488594 DIAPH3Q9NSV4 1193 aa22.2■■□□□ 1.14
GGPS1-206ENST00000488594 ZSWIM5Q9P217 1185 aa22.2■■□□□ 1.14
GGPS1-206ENST00000488594 HIP1O00291 1037 aa22.19■■□□□ 1.14
GGPS1-206ENST00000488594 PPFIA4O75335 1185 aa22.19■■□□□ 1.14
GGPS1-206ENST00000488594 CFBP00751 764 aa22.19■■□□□ 1.14
GGPS1-206ENST00000488594 HOXD8P13378 290 aaPredicted RBP22.19■■□□□ 1.14
GGPS1-206ENST00000488594 ERVK-21P61565 698 aa22.19■■□□□ 1.14
GGPS1-206ENST00000488594 IMMTQ16891 758 aaKnown RBP22.19■■□□□ 1.14
GGPS1-206ENST00000488594 CWC27Q6UX04 472 aaKnown RBP22.19■■□□□ 1.14
GGPS1-206ENST00000488594 SPRED2Q7Z698 418 aa22.19■■□□□ 1.14
GGPS1-206ENST00000488594 TMCO2Q7Z6W1 182 aaPredicted RBP22.19■■□□□ 1.14
GGPS1-206ENST00000488594 SAMD3Q8N6K7 520 aa22.19■■□□□ 1.14
GGPS1-206ENST00000488594 TGS1Q96RS0 853 aaKnown RBP22.19■■□□□ 1.14
GGPS1-206ENST00000488594 UBAC1Q9BSL1 405 aa22.19■■□□□ 1.14
GGPS1-206ENST00000488594 DSCC1Q9BVC3 393 aa22.19■■□□□ 1.14
GGPS1-206ENST00000488594 KRT23Q9C075 422 aa22.19■■□□□ 1.14
GGPS1-206ENST00000488594 OSBPL3Q9H4L5 887 aa22.19■■□□□ 1.14
GGPS1-206ENST00000488594 CNNM2Q9H8M5 875 aa22.19■■□□□ 1.14
GGPS1-206ENST00000488594 VAT1LQ9HCJ6 419 aa22.19■■□□□ 1.14
GGPS1-206ENST00000488594 CTNNA3Q9UI47 895 aa22.19■■□□□ 1.14
GGPS1-206ENST00000488594 EMSYQ7Z589 1322 aa22.18■■□□□ 1.14
GGPS1-206ENST00000488594 REV3LO60673 3130 aa22.18■■□□□ 1.14
GGPS1-206ENST00000488594 ZNF286BP0CG31 522 aa22.18■■□□□ 1.14
GGPS1-206ENST00000488594 GDPD5Q8WTR4 605 aa22.18■■□□□ 1.14
GGPS1-206ENST00000488594 SUGCTQ9HAC7 445 aa22.18■■□□□ 1.14
GGPS1-206ENST00000488594 TRIM71Q2Q1W2 868 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms