RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 A0A0D9SFI3 127 aa12.79□□□□□ -0.36
LCN2-206ENST00000488391 TXNP10599 105 aaKnown RBP12.79□□□□□ -0.36
LCN2-206ENST00000488391 SSTR3P32745 418 aaPredicted RBP12.79□□□□□ -0.36
LCN2-206ENST00000488391 PTPN11Q06124 597 aaPredicted RBP12.79□□□□□ -0.36
LCN2-206ENST00000488391 PPP4R3BQ5MIZ7 849 aa12.79□□□□□ -0.36
LCN2-206ENST00000488391 FAM117BQ6P1L5 589 aa12.79□□□□□ -0.36
LCN2-206ENST00000488391 FAM178BQ8IXR5 827 aa12.79□□□□□ -0.36
LCN2-206ENST00000488391 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.79□□□□□ -0.36
LCN2-206ENST00000488391 IL25Q9H293 177 aa12.79□□□□□ -0.36
LCN2-206ENST00000488391 RANBP17Q9H2T7 1088 aaKnown RBP12.79□□□□□ -0.36
LCN2-206ENST00000488391 GPCPD1Q9NPB8 672 aa12.79□□□□□ -0.36
LCN2-206ENST00000488391 PTPRSQ13332 1948 aa12.79□□□□□ -0.36
LCN2-206ENST00000488391 LOC102724159A0A0B4J2E5 919 aa12.78□□□□□ -0.36
LCN2-206ENST00000488391 NKRFO15226 690 aaKnown RBP eCLIP12.78□□□□□ -0.36
LCN2-206ENST00000488391 RANBP6O60518 1105 aaKnown RBP12.78□□□□□ -0.36
LCN2-206ENST00000488391 KCNA5P22460 613 aa12.78□□□□□ -0.36
LCN2-206ENST00000488391 PWP2Q15269 919 aaKnown RBP12.78□□□□□ -0.36
LCN2-206ENST00000488391 TCTN1Q2MV58 587 aa12.78□□□□□ -0.36
LCN2-206ENST00000488391 SYDE2Q5VT97 1194 aa12.78□□□□□ -0.36
LCN2-206ENST00000488391 GDF6Q6KF10 455 aaPredicted RBP12.78□□□□□ -0.36
LCN2-206ENST00000488391 RNF207Q6ZRF8 634 aa12.78□□□□□ -0.36
LCN2-206ENST00000488391 SCFD2Q8WU76 684 aa12.78□□□□□ -0.36
LCN2-206ENST00000488391 DCAF4Q8WV16 495 aa12.78□□□□□ -0.36
LCN2-206ENST00000488391 CLEC4DQ8WXI8 215 aa12.78□□□□□ -0.36
LCN2-206ENST00000488391 TGS1Q96RS0 853 aaKnown RBP12.78□□□□□ -0.36
LCN2-206ENST00000488391 CTAGE1Q96RT6 745 aa12.78□□□□□ -0.36
LCN2-206ENST00000488391 RAD9AQ99638 391 aa12.78□□□□□ -0.36
LCN2-206ENST00000488391 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.78□□□□□ -0.36
LCN2-206ENST00000488391 FRMPD2Q68DX3 1309 aaPredicted RBP12.78□□□□□ -0.36
LCN2-206ENST00000488391 CCDC171Q6TFL3 1326 aa12.78□□□□□ -0.36
LCN2-206ENST00000488391 LINC01553A4QN01 128 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 PRR33A8MZF0 331 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 ARIH2O95376 493 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 IL9P15248 144 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 SELPP16109 830 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 HSPA4P34932 840 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 ERVK-21P61565 698 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 RPS6P62753 249 aaKnown RBP12.77□□□□□ -0.37
LCN2-206ENST00000488391 LEXMQ3ZCV2 418 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 PTCRAQ6ISU1 281 aaPredicted RBP12.77□□□□□ -0.37
LCN2-206ENST00000488391 CNKSR3Q6P9H4 555 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 BTNL9Q6UXG8 535 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 LRRC8DQ7L1W4 858 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 CCDC155Q8N6L0 562 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 CAGE1Q8TC20 777 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 AFAP1L1Q8TED9 768 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 AFG1LQ8WV93 481 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 DHX38Q92620 1227 aaKnown RBP12.77□□□□□ -0.37
LCN2-206ENST00000488391 MAP4K1Q92918 833 aa12.77□□□□□ -0.37
LCN2-206ENST00000488391 IPO9Q96P70 1041 aaKnown RBP12.77□□□□□ -0.37
LCN2-206ENST00000488391 COL4A4P53420 1690 aaPredicted RBP12.77□□□□□ -0.37
LCN2-206ENST00000488391 TANC1Q9C0D5 1861 aa12.76□□□□□ -0.37
LCN2-206ENST00000488391 NBNO60934 754 aa12.76□□□□□ -0.37
LCN2-206ENST00000488391 GJB5O95377 273 aa12.76□□□□□ -0.37
LCN2-206ENST00000488391 RABEP1Q15276 862 aa12.76□□□□□ -0.37
LCN2-206ENST00000488391 CSPP1Q1MSJ5 1256 aa12.76□□□□□ -0.37
LCN2-206ENST00000488391 CHST3Q7LGC8 479 aa12.76□□□□□ -0.37
LCN2-206ENST00000488391 KCNB2Q92953 911 aa12.76□□□□□ -0.37
LCN2-206ENST00000488391 MPHOSPH6Q99547 160 aaKnown RBP12.76□□□□□ -0.37
LCN2-206ENST00000488391 KIF2CQ99661 725 aa12.76□□□□□ -0.37
LCN2-206ENST00000488391 ABHD14A-ACY1A0A1B0GW23 586 aa12.75□□□□□ -0.37
LCN2-206ENST00000488391 FOXP2O15409 715 aa12.75□□□□□ -0.37
LCN2-206ENST00000488391 CKBP12277 381 aa12.75□□□□□ -0.37
LCN2-206ENST00000488391 ALADP13716 330 aa12.75□□□□□ -0.37
LCN2-206ENST00000488391 EDNRBP24530 442 aa12.75□□□□□ -0.37
LCN2-206ENST00000488391 MRE11P49959 708 aa12.75□□□□□ -0.37
LCN2-206ENST00000488391 IKBKEQ14164 716 aa12.75□□□□□ -0.37
LCN2-206ENST00000488391 LY6KQ17RY6 165 aa12.75□□□□□ -0.37
LCN2-206ENST00000488391 ZNF589Q86UQ0 364 aaPredicted RBP12.75□□□□□ -0.37
LCN2-206ENST00000488391 KAT2BQ92831 832 aa12.75□□□□□ -0.37
LCN2-206ENST00000488391 TMEM47Q9BQJ4 181 aa12.75□□□□□ -0.37
LCN2-206ENST00000488391 C17orf80Q9BSJ5 609 aa12.75□□□□□ -0.37
LCN2-206ENST00000488391 ALG1Q9BT22 464 aa12.75□□□□□ -0.37
LCN2-206ENST00000488391 DSCC1Q9BVC3 393 aa12.75□□□□□ -0.37
LCN2-206ENST00000488391 TOMM22Q9NS69 142 aa12.75□□□□□ -0.37
LCN2-206ENST00000488391 GRXCR2A6NFK2 248 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 B4DLN1 442 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 CXCL10P02778 98 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 MMP3P08254 477 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 NOVP48745 357 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 MRPL12P52815 198 aaKnown RBP12.74□□□□□ -0.37
LCN2-206ENST00000488391 PTH1RQ03431 593 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 BECN1Q14457 450 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 NECTIN1Q15223 517 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 RRP12Q5JTH9 1297 aaKnown RBP12.74□□□□□ -0.37
LCN2-206ENST00000488391 CCDC62Q6P9F0 684 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.74□□□□□ -0.37
LCN2-206ENST00000488391 EP400NLQ6ZTU2 488 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 SEPT14Q6ZU15 432 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 FBXO22Q8NEZ5 403 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 DNERQ8NFT8 737 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 SNX21Q969T3 373 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 HDAC6Q9UBN7 1215 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
LCN2-206ENST00000488391 MYO7AQ13402 2215 aa12.74□□□□□ -0.37
LCN2-206ENST00000488391 H3BQ06 376 aaPredicted RBP12.73□□□□□ -0.37
LCN2-206ENST00000488391 PARNO95453 639 aaKnown RBP12.73□□□□□ -0.37
LCN2-206ENST00000488391 GH1P01241 217 aa12.73□□□□□ -0.37
LCN2-206ENST00000488391 TOP1P11387 765 aaKnown RBP12.73□□□□□ -0.37
LCN2-206ENST00000488391 CASTP20810 708 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms