RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 SEPT14Q6ZU15 432 aa18.39■□□□□ 0.53
ERGIC3-216ENST00000488384 VSIG10LQ86VR7 867 aa18.39■□□□□ 0.53
ERGIC3-216ENST00000488384 FERMT2Q96AC1 680 aa18.39■□□□□ 0.53
ERGIC3-216ENST00000488384 TSEN34Q9BSV6 310 aaKnown RBP18.39■□□□□ 0.53
ERGIC3-216ENST00000488384 SPC25Q9HBM1 224 aa18.39■□□□□ 0.53
ERGIC3-216ENST00000488384 Q9Y3F1 56 aa18.39■□□□□ 0.53
ERGIC3-216ENST00000488384 DNAH12Q6ZR08 3092 aa18.39■□□□□ 0.53
ERGIC3-216ENST00000488384 A0A1W2PQ45 241 aaPredicted RBP18.38■□□□□ 0.53
ERGIC3-216ENST00000488384 A0A1W2PQY0 241 aa18.38■□□□□ 0.53
ERGIC3-216ENST00000488384 DYNC1LI2O43237 492 aaPredicted RBP18.38■□□□□ 0.53
ERGIC3-216ENST00000488384 ACLYP53396 1101 aa18.38■□□□□ 0.53
ERGIC3-216ENST00000488384 MRPS9P82933 396 aaKnown RBP18.38■□□□□ 0.53
ERGIC3-216ENST00000488384 BEX3Q00994 111 aa18.38■□□□□ 0.53
ERGIC3-216ENST00000488384 AKAP17AQ02040 695 aaKnown RBP18.38■□□□□ 0.53
ERGIC3-216ENST00000488384 TTLL4Q14679 1199 aa18.38■□□□□ 0.53
ERGIC3-216ENST00000488384 FSCN1Q16658 493 aaKnown RBP18.38■□□□□ 0.53
ERGIC3-216ENST00000488384 TEX2Q8IWB9 1127 aa18.38■□□□□ 0.53
ERGIC3-216ENST00000488384 DPF3Q92784 378 aa18.38■□□□□ 0.53
ERGIC3-216ENST00000488384 COPS5Q92905 334 aa18.38■□□□□ 0.53
ERGIC3-216ENST00000488384 ZFP91Q96JP5 570 aaPredicted RBP18.38■□□□□ 0.53
ERGIC3-216ENST00000488384 SLKQ9H2G2 1235 aaPredicted RBP18.38■□□□□ 0.53
ERGIC3-216ENST00000488384 ESYT2A0FGR8 921 aa18.37■□□□□ 0.53
ERGIC3-216ENST00000488384 SMCO2A6NFE2 343 aa18.37■□□□□ 0.53
ERGIC3-216ENST00000488384 MOXD2PA6NHM9 499 aa18.37■□□□□ 0.53
ERGIC3-216ENST00000488384 NKRFO15226 690 aaKnown RBP eCLIP18.37■□□□□ 0.53
ERGIC3-216ENST00000488384 TXNP10599 105 aaKnown RBP18.37■□□□□ 0.53
ERGIC3-216ENST00000488384 ATN1P54259 1190 aaPredicted RBP18.37■□□□□ 0.53
ERGIC3-216ENST00000488384 KCNA10Q16322 511 aa18.37■□□□□ 0.53
ERGIC3-216ENST00000488384 ME3Q16798 604 aa18.37■□□□□ 0.53
ERGIC3-216ENST00000488384 GNASQ5JWF2 1037 aa18.37■□□□□ 0.53
ERGIC3-216ENST00000488384 TRIM22Q8IYM9 498 aa18.37■□□□□ 0.53
ERGIC3-216ENST00000488384 GTF3C6Q969F1 213 aa18.37■□□□□ 0.53
ERGIC3-216ENST00000488384 AP5M1Q9H0R1 490 aa18.37■□□□□ 0.53
ERGIC3-216ENST00000488384 SPDYE3A6NKU9 549 aa18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 ADAMTS3O15072 1205 aa18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 DEXIO95424 95 aa18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 ASGR1P07306 291 aa18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 SSRP1Q08945 709 aaKnown RBP18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 SNX17Q15036 470 aa18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 PCNX4Q63HM2 1172 aa18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 CPLX2Q6PUV4 134 aaKnown RBP18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 CHRDL2Q6WN34 429 aa18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 NECAB1Q8N987 351 aa18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 PCSK9Q8NBP7 692 aaKnown RBP18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 OR6J1Q8NGC5 347 aa18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 INPP4AQ96PE3 977 aaPredicted RBP18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 ZMYND12Q9H0C1 365 aa18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 VPS54Q9P1Q0 977 aa18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 PCDHA6Q9UN73 950 aa18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 PCDHA8Q9Y5H6 950 aa18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 MRVI1Q9Y6F6 885 aa18.36■□□□□ 0.53
ERGIC3-216ENST00000488384 STK36Q9NRP7 1315 aa18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 EVI5O60447 810 aa18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 CDKL5O76039 1030 aa18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 CTDNEP1O95476 244 aa18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 CLK2P49760 499 aaKnown RBP18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 ARHGAP1Q07960 439 aa18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 ST3GAL1Q11201 340 aa18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 LY6KQ17RY6 165 aa18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 SLC39A5Q6ZMH5 540 aa18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 C7orf61Q8IZ16 206 aa18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 CCDC12Q8WUD4 166 aaPredicted RBP18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 PGBD1Q96JS3 809 aa18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 ANO3Q9BYT9 981 aa18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 GLT8D2Q9H1C3 349 aa18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 UPF2Q9HAU5 1272 aaKnown RBP18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 TMEM260Q9NX78 707 aa18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 DDX41Q9UJV9 622 aaKnown RBP18.35■□□□□ 0.53
ERGIC3-216ENST00000488384 DTNBO60941 627 aa18.34■□□□□ 0.53
ERGIC3-216ENST00000488384 STAM2O75886 525 aa18.34■□□□□ 0.53
ERGIC3-216ENST00000488384 RTP1P59025 263 aa18.34■□□□□ 0.53
ERGIC3-216ENST00000488384 AP3B2Q13367 1082 aa18.34■□□□□ 0.53
ERGIC3-216ENST00000488384 XRRA1Q6P2D8 792 aa18.34■□□□□ 0.53
ERGIC3-216ENST00000488384 CCDC148Q8NFR7 591 aa18.34■□□□□ 0.53
ERGIC3-216ENST00000488384 TBC1D32Q96NH3 1257 aa18.34■□□□□ 0.53
ERGIC3-216ENST00000488384 AIFM3Q96NN9 605 aa18.34■□□□□ 0.53
ERGIC3-216ENST00000488384 STARD7Q9NQZ5 370 aa18.34■□□□□ 0.53
ERGIC3-216ENST00000488384 SZT2Q5T011 3432 aa18.33■□□□□ 0.53
ERGIC3-216ENST00000488384 GH1P01241 217 aa18.33■□□□□ 0.52
ERGIC3-216ENST00000488384 UBA1P22314 1058 aaKnown RBP18.33■□□□□ 0.52
ERGIC3-216ENST00000488384 CPT1AP50416 773 aa18.33■□□□□ 0.52
ERGIC3-216ENST00000488384 SEMA3FQ13275 785 aa18.33■□□□□ 0.52
ERGIC3-216ENST00000488384 RABEP1Q15276 862 aa18.33■□□□□ 0.52
ERGIC3-216ENST00000488384 C1orf53Q5VUE5 145 aa18.33■□□□□ 0.52
ERGIC3-216ENST00000488384 CXCL17Q6UXB2 119 aa18.33■□□□□ 0.52
ERGIC3-216ENST00000488384 GLT1D1Q96MS3 346 aa18.33■□□□□ 0.52
ERGIC3-216ENST00000488384 C6orf50Q9HD87 102 aa18.33■□□□□ 0.52
ERGIC3-216ENST00000488384 SH3GLB2Q9NR46 395 aa18.33■□□□□ 0.52
ERGIC3-216ENST00000488384 RTEL1Q9NZ71 1219 aa18.33■□□□□ 0.52
ERGIC3-216ENST00000488384 ELP1O95163 1332 aa18.32■□□□□ 0.52
ERGIC3-216ENST00000488384 A6NJR5 290 aa18.32■□□□□ 0.52
ERGIC3-216ENST00000488384 FOSP01100 380 aaPredicted RBP18.32■□□□□ 0.52
ERGIC3-216ENST00000488384 ICAM3P32942 547 aa18.32■□□□□ 0.52
ERGIC3-216ENST00000488384 SREBF1P36956 1147 aa18.32■□□□□ 0.52
ERGIC3-216ENST00000488384 GNPTABQ3T906 1256 aa18.32■□□□□ 0.52
ERGIC3-216ENST00000488384 TRIM60Q495X7 471 aa18.32■□□□□ 0.52
ERGIC3-216ENST00000488384 JAKMIP3Q5VZ66 844 aa18.32■□□□□ 0.52
ERGIC3-216ENST00000488384 KCNV1Q6PIU1 500 aa18.32■□□□□ 0.52
ERGIC3-216ENST00000488384 REXO1Q8N1G1 1221 aaKnown RBP18.32■□□□□ 0.52
ERGIC3-216ENST00000488384 EMID1Q96A84 441 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms