RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 TRAF1Q13077 416 aa22.4■■□□□ 1.18
CD55-209ENST00000488171 NECTIN1Q15223 517 aa22.4■■□□□ 1.18
CD55-209ENST00000488171 BMP2KLQ5H9B9 411 aa22.4■■□□□ 1.18
CD55-209ENST00000488171 CENPQQ7L2Z9 268 aaPredicted RBP22.4■■□□□ 1.18
CD55-209ENST00000488171 ZNF654Q8IZM8 581 aa22.4■■□□□ 1.18
CD55-209ENST00000488171 IL31RAQ8NI17 732 aa22.4■■□□□ 1.18
CD55-209ENST00000488171 SCLYQ96I15 445 aa22.4■■□□□ 1.18
CD55-209ENST00000488171 MYL10Q9BUA6 226 aa22.4■■□□□ 1.18
CD55-209ENST00000488171 CXXC1Q9P0U4 656 aaPredicted RBP22.4■■□□□ 1.18
CD55-209ENST00000488171 GCOM1H8Y6P7 765 aaPredicted RBP22.39■■□□□ 1.18
CD55-209ENST00000488171 DDAH1O94760 285 aa22.39■■□□□ 1.18
CD55-209ENST00000488171 FGBP02675 491 aa22.39■■□□□ 1.18
CD55-209ENST00000488171 POLR2MP0CAP2 368 aa22.39■■□□□ 1.18
CD55-209ENST00000488171 PTPN11Q06124 597 aaPredicted RBP22.39■■□□□ 1.18
CD55-209ENST00000488171 PGM5Q15124 567 aa22.39■■□□□ 1.18
CD55-209ENST00000488171 CREB3L3Q68CJ9 461 aa22.39■■□□□ 1.18
CD55-209ENST00000488171 CASC1Q6TDU7 716 aa22.39■■□□□ 1.18
CD55-209ENST00000488171 EMID1Q96A84 441 aaPredicted RBP22.39■■□□□ 1.18
CD55-209ENST00000488171 MRVI1Q9Y6F6 885 aa22.39■■□□□ 1.18
CD55-209ENST00000488171 CDH23Q9H251 3354 aa22.39■■□□□ 1.18
CD55-209ENST00000488171 SH2B2O14492 632 aaPredicted RBP22.38■■□□□ 1.17
CD55-209ENST00000488171 MYCLP12524 364 aaPredicted RBP22.38■■□□□ 1.17
CD55-209ENST00000488171 MCM5P33992 734 aa22.38■■□□□ 1.17
CD55-209ENST00000488171 PBX2P40425 430 aa22.38■■□□□ 1.17
CD55-209ENST00000488171 VSIG10LQ86VR7 867 aa22.38■■□□□ 1.17
CD55-209ENST00000488171 PIBF1Q8WXW3 757 aa22.38■■□□□ 1.17
CD55-209ENST00000488171 MYLIPQ8WY64 445 aa22.38■■□□□ 1.17
CD55-209ENST00000488171 KAT2BQ92831 832 aa22.38■■□□□ 1.17
CD55-209ENST00000488171 SPZ1Q9BXG8 430 aa22.38■■□□□ 1.17
CD55-209ENST00000488171 OTOP2Q7RTS6 562 aa22.38■■□□□ 1.17
CD55-209ENST00000488171 TMEM87BQ96K49 555 aa22.38■■□□□ 1.17
CD55-209ENST00000488171 PBX4Q9BYU1 374 aa22.38■■□□□ 1.17
CD55-209ENST00000488171 ANO2Q9NQ90 1003 aa22.38■■□□□ 1.17
CD55-209ENST00000488171 CASTP20810 708 aaKnown RBP22.37■■□□□ 1.17
CD55-209ENST00000488171 FCHSD1Q86WN1 690 aa22.37■■□□□ 1.17
CD55-209ENST00000488171 RPUSD2Q8IZ73 545 aaKnown RBP22.37■■□□□ 1.17
CD55-209ENST00000488171 CTCFLQ8NI51 663 aaPredicted RBP22.37■■□□□ 1.17
CD55-209ENST00000488171 TIFAQ96CG3 184 aa22.37■■□□□ 1.17
CD55-209ENST00000488171 EYSQ5T1H1 3165 aa22.36■■□□□ 1.17
CD55-209ENST00000488171 KIF5BP33176 963 aa22.36■■□□□ 1.17
CD55-209ENST00000488171 CHMP4BP1P59074 171 aa22.36■■□□□ 1.17
CD55-209ENST00000488171 LAMC2Q13753 1193 aa22.36■■□□□ 1.17
CD55-209ENST00000488171 GRIN2CQ14957 1233 aa22.36■■□□□ 1.17
CD55-209ENST00000488171 DGKDQ16760 1214 aa22.36■■□□□ 1.17
CD55-209ENST00000488171 SESTD1Q86VW0 696 aa22.36■■□□□ 1.17
CD55-209ENST00000488171 TMTC2Q8N394 836 aa22.36■■□□□ 1.17
CD55-209ENST00000488171 PPTC7Q8NI37 304 aa22.36■■□□□ 1.17
CD55-209ENST00000488171 ZFP91Q96JP5 570 aaPredicted RBP22.36■■□□□ 1.17
CD55-209ENST00000488171 CTAGE1Q96RT6 745 aa22.36■■□□□ 1.17
CD55-209ENST00000488171 MTIF3Q9H2K0 278 aaKnown RBP22.36■■□□□ 1.17
CD55-209ENST00000488171 TANC1Q9C0D5 1861 aa22.35■■□□□ 1.17
CD55-209ENST00000488171 FRMPD4Q14CM0 1322 aa22.35■■□□□ 1.17
CD55-209ENST00000488171 MYH7BA7E2Y1 1941 aa22.35■■□□□ 1.17
CD55-209ENST00000488171 SCN5AQ14524 2016 aa22.35■■□□□ 1.17
CD55-209ENST00000488171 PLEKHA8P1O95397 391 aa22.35■■□□□ 1.17
CD55-209ENST00000488171 SMARCA1P28370 1054 aa22.35■■□□□ 1.17
CD55-209ENST00000488171 CCND2P30279 289 aa22.35■■□□□ 1.17
CD55-209ENST00000488171 LIFRP42702 1097 aa22.35■■□□□ 1.17
CD55-209ENST00000488171 SP2Q02086 613 aa22.35■■□□□ 1.17
CD55-209ENST00000488171 KCNV1Q6PIU1 500 aa22.35■■□□□ 1.17
CD55-209ENST00000488171 NFXL1Q6ZNB6 911 aa22.35■■□□□ 1.17
CD55-209ENST00000488171 DHX37Q8IY37 1157 aaKnown RBP22.35■■□□□ 1.17
CD55-209ENST00000488171 RRP36Q96EU6 259 aaKnown RBP22.35■■□□□ 1.17
CD55-209ENST00000488171 ZNF576Q9H609 170 aa22.35■■□□□ 1.17
CD55-209ENST00000488171 CCDC69A6NI79 296 aa22.34■■□□□ 1.17
CD55-209ENST00000488171 PITPNM1O00562 1244 aa22.34■■□□□ 1.17
CD55-209ENST00000488171 HOXD8P13378 290 aaPredicted RBP22.34■■□□□ 1.17
CD55-209ENST00000488171 RXRAP19793 462 aa22.34■■□□□ 1.17
CD55-209ENST00000488171 PTGISQ16647 500 aa22.34■■□□□ 1.17
CD55-209ENST00000488171 CELF3Q5SZQ8 465 aaKnown RBP22.34■■□□□ 1.17
CD55-209ENST00000488171 MYSM1Q5VVJ2 828 aa22.34■■□□□ 1.17
CD55-209ENST00000488171 GDF6Q6KF10 455 aaPredicted RBP22.34■■□□□ 1.17
CD55-209ENST00000488171 SRBD1Q8N5C6 995 aaKnown RBP22.34■■□□□ 1.17
CD55-209ENST00000488171 GPKOWQ92917 476 aaPredicted RBP eCLIP22.34■■□□□ 1.172e-7■■■■■ 33.4
CD55-209ENST00000488171 LZTS2Q9BRK4 669 aa22.34■■□□□ 1.17
CD55-209ENST00000488171 LRRC2Q9BYS8 371 aa22.34■■□□□ 1.17
CD55-209ENST00000488171 GBF1Q92538 1859 aa22.33■■□□□ 1.17
CD55-209ENST00000488171 SORBS3O60504 671 aa22.33■■□□□ 1.17
CD55-209ENST00000488171 F2P00734 622 aa22.33■■□□□ 1.17
CD55-209ENST00000488171 PFKMP08237 780 aa22.33■■□□□ 1.17
CD55-209ENST00000488171 UBA1P22314 1058 aaKnown RBP22.33■■□□□ 1.17
CD55-209ENST00000488171 MRPS9P82933 396 aaKnown RBP22.33■■□□□ 1.17
CD55-209ENST00000488171 DEFB128Q7Z7B8 93 aa22.33■■□□□ 1.17
CD55-209ENST00000488171 CMTR1Q8N1G2 835 aaKnown RBP22.33■■□□□ 1.17
CD55-209ENST00000488171 MAFAQ8NHW3 353 aaPredicted RBP22.33■■□□□ 1.17
CD55-209ENST00000488171 HAS3O00219 553 aa22.32■■□□□ 1.16
CD55-209ENST00000488171 GGPS1O95749 300 aa22.32■■□□□ 1.16
CD55-209ENST00000488171 IQCF3P0C7M6 154 aa22.32■■□□□ 1.16
CD55-209ENST00000488171 ZNF286BP0CG31 522 aa22.32■■□□□ 1.16
CD55-209ENST00000488171 TGFB3P10600 412 aa22.32■■□□□ 1.16
CD55-209ENST00000488171 FOSL2P15408 326 aa22.32■■□□□ 1.16
CD55-209ENST00000488171 PSEN2P49810 448 aa22.32■■□□□ 1.16
CD55-209ENST00000488171 GNAQP50148 359 aa22.32■■□□□ 1.16
CD55-209ENST00000488171 HSDL1Q3SXM5 330 aa22.32■■□□□ 1.16
CD55-209ENST00000488171 RAB11FIP4Q86YS3 637 aa22.32■■□□□ 1.16
CD55-209ENST00000488171 NOD1Q9Y239 953 aa22.32■■□□□ 1.16
CD55-209ENST00000488171 CALM1P0DP23 149 aa22.31■■□□□ 1.16
CD55-209ENST00000488171 CALM2P0DP24 149 aa22.31■■□□□ 1.16
CD55-209ENST00000488171 CALM3P0DP25 149 aa22.31■■□□□ 1.16
CD55-209ENST00000488171 RFC2P35250 354 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms