RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 SLC26A6Q9BXS9 759 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 C6orf50Q9HD87 102 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 PDGFCQ9NRA1 345 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 BARHL2Q9NY43 387 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 COL20A1Q9P218 1284 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 GNEQ9Y223 722 aaKnown RBP10.74□□□□□ -0.69
LCN2-205ENST00000487719 ATP11BQ9Y2G3 1177 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 ELP1O95163 1332 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 WDR81Q562E7 1941 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 A0A0U1RQG5 324 aaPredicted RBP10.73□□□□□ -0.69
LCN2-205ENST00000487719 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.73□□□□□ -0.69
LCN2-205ENST00000487719 RBM47A0AV96 593 aaKnown RBP10.73□□□□□ -0.69
LCN2-205ENST00000487719 DCDC2CA8MYV0 355 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 OPLAHO14841 1288 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 TLR3O15455 904 aaKnown RBP10.73□□□□□ -0.69
LCN2-205ENST00000487719 PRPF3O43395 683 aaKnown RBP10.73□□□□□ -0.69
LCN2-205ENST00000487719 TGFB3P10600 412 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 IFNAR1P17181 557 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 PDIA3P30101 505 aaKnown RBP10.73□□□□□ -0.69
LCN2-205ENST00000487719 CDC27P30260 824 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 ADD1P35611 737 aaKnown RBP10.73□□□□□ -0.69
LCN2-205ENST00000487719 NEK4P51957 841 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 RTP1P59025 263 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 STK3Q13188 491 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 AP3B2Q13367 1082 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 TOB2Q14106 344 aaPredicted RBP10.73□□□□□ -0.69
LCN2-205ENST00000487719 PFKFB3Q16875 520 aaPredicted RBP10.73□□□□□ -0.69
LCN2-205ENST00000487719 WWC2Q6AWC2 1192 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 USP17L6PQ6QN14 398 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 SLC39A5Q6ZMH5 540 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 NLRX1Q86UT6 975 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 KLHDC9Q8NEP7 349 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 IL27Q8NEV9 243 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 LBHD1Q9BQE6 289 aaPredicted RBP10.73□□□□□ -0.69
LCN2-205ENST00000487719 ALDH8A1Q9H2A2 487 aaPredicted RBP10.73□□□□□ -0.69
LCN2-205ENST00000487719 TRIOBPQ9H2D6 2365 aa10.73□□□□□ -0.69
LCN2-205ENST00000487719 SMCO2A6NFE2 343 aa10.72□□□□□ -0.69
LCN2-205ENST00000487719 H0YGN5 161 aa10.72□□□□□ -0.69
LCN2-205ENST00000487719 DEXIO95424 95 aa10.72□□□□□ -0.69
LCN2-205ENST00000487719 LAMC2Q13753 1193 aa10.72□□□□□ -0.69
LCN2-205ENST00000487719 LRRC26Q2I0M4 334 aa10.72□□□□□ -0.69
LCN2-205ENST00000487719 C1orf53Q5VUE5 145 aa10.72□□□□□ -0.69
LCN2-205ENST00000487719 PCNX4Q63HM2 1172 aa10.72□□□□□ -0.69
LCN2-205ENST00000487719 VSIG10LQ86VR7 867 aa10.72□□□□□ -0.69
LCN2-205ENST00000487719 DHX37Q8IY37 1157 aaKnown RBP10.72□□□□□ -0.69
LCN2-205ENST00000487719 FAM177A1Q8N128 213 aaPredicted RBP10.72□□□□□ -0.69
LCN2-205ENST00000487719 GIMAP8Q8ND71 665 aaPredicted RBP10.72□□□□□ -0.69
LCN2-205ENST00000487719 WASF1Q92558 559 aa10.72□□□□□ -0.69
LCN2-205ENST00000487719 RIC8AQ9NPQ8 531 aa10.72□□□□□ -0.69
LCN2-205ENST00000487719 DDX49Q9Y6V7 483 aaKnown RBP10.72□□□□□ -0.69
LCN2-205ENST00000487719 LTBP2Q14767 1821 aa10.72□□□□□ -0.69
LCN2-205ENST00000487719 ESYT2A0FGR8 921 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 STXBP3O00186 592 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 NOP56O00567 594 aaKnown RBP10.71□□□□□ -0.69
LCN2-205ENST00000487719 MEIS2O14770 477 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 ADCY6O43306 1168 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 FIBPO43427 364 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 PQBP1O60828 265 aaKnown RBP10.71□□□□□ -0.69
LCN2-205ENST00000487719 MYL3P08590 195 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 ZNF76P36508 570 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 NKX3-2P78367 333 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 BEX3Q00994 111 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 FUT2Q10981 343 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 NEDD9Q14511 834 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 FRMPD4Q14CM0 1322 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 DGKDQ16760 1214 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 UBE2SQ16763 222 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 TRIM60Q495X7 471 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 C8orf34Q49A92 452 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 REXO1Q8N1G1 1221 aaKnown RBP10.71□□□□□ -0.69
LCN2-205ENST00000487719 PHKBQ93100 1093 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 KATNAL1Q9BW62 490 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 C22orf23Q9BZE7 217 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 MLXIPQ9HAP2 919 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 NCOA5Q9HCD5 579 aaKnown RBP10.71□□□□□ -0.69
LCN2-205ENST00000487719 PRDM5Q9NQX1 630 aaPredicted RBP10.71□□□□□ -0.69
LCN2-205ENST00000487719 SH3GLB2Q9NR46 395 aa10.71□□□□□ -0.69
LCN2-205ENST00000487719 FAM217BQ9NTX9 383 aaPredicted RBP10.71□□□□□ -0.69
LCN2-205ENST00000487719 MYADML2A6NDP7 307 aa10.7□□□□□ -0.7
LCN2-205ENST00000487719 ARVCFO00192 962 aa10.7□□□□□ -0.7
LCN2-205ENST00000487719 ST18O60284 1047 aa10.7□□□□□ -0.7
LCN2-205ENST00000487719 AK2P54819 239 aa10.7□□□□□ -0.7
LCN2-205ENST00000487719 NLRP5P59047 1200 aa10.7□□□□□ -0.7
LCN2-205ENST00000487719 SNX17Q15036 470 aa10.7□□□□□ -0.7
LCN2-205ENST00000487719 LY6KQ17RY6 165 aa10.7□□□□□ -0.7
LCN2-205ENST00000487719 CXCL17Q6UXB2 119 aa10.7□□□□□ -0.7
LCN2-205ENST00000487719 GPRASP2Q96D09 838 aa10.7□□□□□ -0.7
LCN2-205ENST00000487719 IL17RAQ96F46 866 aa10.7□□□□□ -0.7
LCN2-205ENST00000487719 TOX2Q96NM4 488 aa10.7□□□□□ -0.7
LCN2-205ENST00000487719 MTG1Q9BT17 334 aaPredicted RBP10.7□□□□□ -0.7
LCN2-205ENST00000487719 BRMS1Q9HCU9 246 aa10.7□□□□□ -0.7
LCN2-205ENST00000487719 TCEAL9Q9UHQ7 104 aa10.7□□□□□ -0.7
LCN2-205ENST00000487719 DDX41Q9UJV9 622 aaKnown RBP10.7□□□□□ -0.7
LCN2-205ENST00000487719 ZMYND8Q9ULU4 1186 aaPredicted RBP10.7□□□□□ -0.7
LCN2-205ENST00000487719 PCDHA6Q9UN73 950 aa10.7□□□□□ -0.7
LCN2-205ENST00000487719 PCDHA8Q9Y5H6 950 aa10.7□□□□□ -0.7
LCN2-205ENST00000487719 STK36Q9NRP7 1315 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 A6NJR5 290 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 MAFGO15525 162 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 PFKFB2O60825 505 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms