RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 LRRFIP1Q32MZ4 808 aaKnown RBP7.06□□□□□ -1.28
COL4A3-206ENST00000487633 C12orf60Q5U649 245 aa7.06□□□□□ -1.28
COL4A3-206ENST00000487633 C16orf86Q6ZW13 317 aa7.06□□□□□ -1.28
COL4A3-206ENST00000487633 LRRC47Q8N1G4 583 aaKnown RBP7.06□□□□□ -1.28
COL4A3-206ENST00000487633 SUSD6Q92537 303 aa7.06□□□□□ -1.28
COL4A3-206ENST00000487633 TOP1MTQ969P6 601 aa7.06□□□□□ -1.28
COL4A3-206ENST00000487633 TRERF1Q96PN7 1200 aa7.06□□□□□ -1.28
COL4A3-206ENST00000487633 ACAD9Q9H845 621 aa7.06□□□□□ -1.28
COL4A3-206ENST00000487633 RC3H2Q9HBD1 1191 aaKnown RBP7.06□□□□□ -1.28
COL4A3-206ENST00000487633 GOPCQ9HD26 462 aa7.06□□□□□ -1.28
COL4A3-206ENST00000487633 CYP39A1Q9NYL5 469 aa7.06□□□□□ -1.28
COL4A3-206ENST00000487633 NOB1Q9ULX3 412 aaKnown RBP7.06□□□□□ -1.28
COL4A3-206ENST00000487633 COG6Q9Y2V7 657 aa7.06□□□□□ -1.28
COL4A3-206ENST00000487633 ZNF532Q9HCE3 1301 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 A6NJR5 290 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 ASB14A6NK59 587 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 C5orf67F2Z3F1 127 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 ZBED4O75132 1171 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 ZIC2O95409 532 aaPredicted RBP7.05□□□□□ -1.28
COL4A3-206ENST00000487633 ASGR2P07307 311 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 ALAS1P13196 640 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 RASA1P20936 1047 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 BMPR1AP36894 532 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 NRIP1P48552 1158 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 ALDH5A1P51649 535 aaPredicted RBP7.05□□□□□ -1.28
COL4A3-206ENST00000487633 COASYQ13057 564 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 PUM1Q14671 1186 aaKnown RBP eCLIP7.05□□□□□ -1.28
COL4A3-206ENST00000487633 CCDC158Q5M9N0 1113 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 KREMEN2Q8NCW0 462 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 CAGE1Q8TC20 777 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 ZNF512BQ96KM6 892 aaPredicted RBP7.05□□□□□ -1.28
COL4A3-206ENST00000487633 YME1L1Q96TA2 773 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 PHF7Q9BWX1 381 aaPredicted RBP7.05□□□□□ -1.28
COL4A3-206ENST00000487633 IRF2BPLQ9H1B7 796 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 SH2D4AQ9H788 454 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 KANSL2Q9H9L4 492 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 VTA1Q9NP79 307 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 SWAP70Q9UH65 585 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 GTF2IRD1Q9UHL9 959 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 NOD1Q9Y239 953 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 CACNA1IQ9P0X4 2223 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 TTC3P53804 2025 aa7.05□□□□□ -1.28
COL4A3-206ENST00000487633 IGKV6D-41A0A0C4DH26 115 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 DCDC2BA2VCK2 349 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 CYSRT1A8MQ03 144 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 NFIBO00712 420 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 AMHP03971 560 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 ITGB1P05556 798 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 MMP3P08254 477 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 CPT1AP50416 773 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 ATXN1P54253 815 aaKnown RBP7.04□□□□□ -1.28
COL4A3-206ENST00000487633 PTPN11Q06124 597 aaPredicted RBP7.04□□□□□ -1.28
COL4A3-206ENST00000487633 G3BP1Q13283 466 aaKnown RBP eCLIP7.04□□□□□ -1.28
COL4A3-206ENST00000487633 BAATQ14032 418 aaPredicted RBP7.04□□□□□ -1.28
COL4A3-206ENST00000487633 ANGPT1Q15389 498 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 PLEKHG4Q58EX7 1191 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 CTR9Q6PD62 1173 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 NSMFQ6X4W1 530 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 SLC30A10Q6XR72 485 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 AFG1LQ8WV93 481 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 ALG1Q9BT22 464 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 CRNKL1Q9BZJ0 848 aaKnown RBP7.04□□□□□ -1.28
COL4A3-206ENST00000487633 S1PR5Q9H228 398 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 CLIP2Q9UDT6 1046 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 FBXO40Q9UH90 709 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 PLAGL2Q9UPG8 496 aa7.04□□□□□ -1.28
COL4A3-206ENST00000487633 SUPT16HQ9Y5B9 1047 aaKnown RBP7.04□□□□□ -1.28
COL4A3-206ENST00000487633 SETXQ7Z333 2677 aaKnown RBP7.04□□□□□ -1.28
COL4A3-206ENST00000487633 C2CD4DB7Z1M9 353 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 TMEM232C9JQI7 657 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 BCAR3O75815 825 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 MBD4O95243 580 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 MMP1P03956 469 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 ZNF286BP0CG31 522 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 GATMP50440 423 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 LY6KQ17RY6 165 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 SLC9C2Q5TAH2 1124 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 ASTLQ6HA08 431 aaPredicted RBP7.03□□□□□ -1.28
COL4A3-206ENST00000487633 KANK3Q6NY19 840 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 SESTD1Q86VW0 696 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 EFHBQ8N7U6 833 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 SPPL3Q8TCT6 385 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 RIN2Q8WYP3 895 aaPredicted RBP7.03□□□□□ -1.28
COL4A3-206ENST00000487633 CCDC17Q96LX7 622 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 SAMD11Q96NU1 681 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 GPHNQ9NQX3 736 aaPredicted RBP7.03□□□□□ -1.28
COL4A3-206ENST00000487633 HCSTQ9UBK5 93 aa7.03□□□□□ -1.28
COL4A3-206ENST00000487633 ZBED9Q6R2W3 1325 aa7.02□□□□□ -1.28
COL4A3-206ENST00000487633 FNDC1Q4ZHG4 1894 aaPredicted RBP7.02□□□□□ -1.28
COL4A3-206ENST00000487633 FAM208BQ5VWN6 2430 aa7.02□□□□□ -1.28
COL4A3-206ENST00000487633 ZZEF1O43149 2961 aa7.02□□□□□ -1.28
COL4A3-206ENST00000487633 ZFYVE26Q68DK2 2539 aa7.02□□□□□ -1.29
COL4A3-206ENST00000487633 SORBS3O60504 671 aa7.02□□□□□ -1.29
COL4A3-206ENST00000487633 PRDM1O75626 825 aa7.02□□□□□ -1.29
COL4A3-206ENST00000487633 WEE2P0C1S8 567 aa7.02□□□□□ -1.29
COL4A3-206ENST00000487633 NUBP1P53384 320 aa7.02□□□□□ -1.29
COL4A3-206ENST00000487633 OAZ1P54368 228 aa7.02□□□□□ -1.29
COL4A3-206ENST00000487633 ARHGAP1Q07960 439 aa7.02□□□□□ -1.29
COL4A3-206ENST00000487633 COL9A3Q14050 684 aaPredicted RBP7.02□□□□□ -1.29
COL4A3-206ENST00000487633 POLA2Q14181 598 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms