RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 MTFR1LQ9H019 292 aa7.91□□□□□ -1.14
CUL3-211ENST00000487558 PCDHA8Q9Y5H6 950 aa7.91□□□□□ -1.14
CUL3-211ENST00000487558 NPHP3-ACAD11A0A0J9YXS1 232 aa7.9□□□□□ -1.14
CUL3-211ENST00000487558 TBC1D8O95759 1140 aa7.9□□□□□ -1.14
CUL3-211ENST00000487558 LTKP29376 864 aa7.9□□□□□ -1.14
CUL3-211ENST00000487558 EXOSC10Q01780 885 aaKnown RBP7.9□□□□□ -1.14
CUL3-211ENST00000487558 STRN3Q13033 797 aa7.9□□□□□ -1.14
CUL3-211ENST00000487558 GAB4Q2WGN9 574 aa7.9□□□□□ -1.14
CUL3-211ENST00000487558 RTP2Q5QGT7 225 aa7.9□□□□□ -1.14
CUL3-211ENST00000487558 ZCCHC8Q6NZY4 707 aaKnown RBP7.9□□□□□ -1.14
CUL3-211ENST00000487558 PKN3Q6P5Z2 889 aa7.9□□□□□ -1.14
CUL3-211ENST00000487558 LBX2Q6XYB7 198 aa7.9□□□□□ -1.14
CUL3-211ENST00000487558 SYDE1Q6ZW31 735 aaPredicted RBP7.9□□□□□ -1.14
CUL3-211ENST00000487558 ZC3H7AQ8IWR0 971 aaKnown RBP7.9□□□□□ -1.14
CUL3-211ENST00000487558 CDADC1Q9BWV3 514 aa7.9□□□□□ -1.14
CUL3-211ENST00000487558 KLHL42Q9P2K6 505 aa7.9□□□□□ -1.14
CUL3-211ENST00000487558 TMEFF2Q9UIK5 374 aaPredicted RBP7.9□□□□□ -1.14
CUL3-211ENST00000487558 WASH4PA8MWX3 477 aa7.89□□□□□ -1.15
CUL3-211ENST00000487558 FGF10O15520 208 aaPredicted RBP7.89□□□□□ -1.15
CUL3-211ENST00000487558 BRINP1O60477 761 aa7.89□□□□□ -1.15
CUL3-211ENST00000487558 SCNN1BP51168 640 aa7.89□□□□□ -1.15
CUL3-211ENST00000487558 PAK1Q13153 545 aa7.89□□□□□ -1.15
CUL3-211ENST00000487558 PIK3R6Q5UE93 754 aa7.89□□□□□ -1.15
CUL3-211ENST00000487558 MPZL3Q6UWV2 235 aa7.89□□□□□ -1.15
CUL3-211ENST00000487558 STRA8Q7Z7C7 330 aa7.89□□□□□ -1.15
CUL3-211ENST00000487558 KIF18BQ86Y91 864 aa7.89□□□□□ -1.15
CUL3-211ENST00000487558 NAT16Q8N8M0 369 aa7.89□□□□□ -1.15
CUL3-211ENST00000487558 PTCHD1Q96NR3 888 aa7.89□□□□□ -1.15
CUL3-211ENST00000487558 AP5S1Q9NUS5 200 aa7.89□□□□□ -1.15
CUL3-211ENST00000487558 SAMD15Q9P1V8 674 aa7.89□□□□□ -1.15
CUL3-211ENST00000487558 ARVCFO00192 962 aa7.88□□□□□ -1.15
CUL3-211ENST00000487558 ARNTLO00327 626 aa7.88□□□□□ -1.15
CUL3-211ENST00000487558 MYO1BO43795 1136 aa7.88□□□□□ -1.15
CUL3-211ENST00000487558 FKTNO75072 461 aa7.88□□□□□ -1.15
CUL3-211ENST00000487558 EYA4O95677 639 aa7.88□□□□□ -1.15
CUL3-211ENST00000487558 RBM10P98175 930 aaKnown RBP7.88□□□□□ -1.15
CUL3-211ENST00000487558 KIZQ2M2Z5 673 aa7.88□□□□□ -1.15
CUL3-211ENST00000487558 RNF219Q5W0B1 726 aaPredicted RBP7.88□□□□□ -1.15
CUL3-211ENST00000487558 CYP2R1Q6VVX0 501 aa7.88□□□□□ -1.15
CUL3-211ENST00000487558 LCNL1Q6ZST4 164 aa7.88□□□□□ -1.15
CUL3-211ENST00000487558 CREG2Q8IUH2 290 aa7.88□□□□□ -1.15
CUL3-211ENST00000487558 CCDC103Q8IW40 242 aa7.88□□□□□ -1.15
CUL3-211ENST00000487558 LRRC56Q8IYG6 542 aaPredicted RBP7.88□□□□□ -1.15
CUL3-211ENST00000487558 RCBTB1Q8NDN9 531 aa7.88□□□□□ -1.15
CUL3-211ENST00000487558 OR2W6PQ8NHA6 318 aa7.88□□□□□ -1.15
CUL3-211ENST00000487558 WDR66Q8TBY9 1149 aa7.88□□□□□ -1.15
CUL3-211ENST00000487558 USP7Q93009 1102 aa7.88□□□□□ -1.15
CUL3-211ENST00000487558 ORAI3Q9BRQ5 295 aa7.88□□□□□ -1.15
CUL3-211ENST00000487558 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.88□□□□□ -1.15
CUL3-211ENST00000487558 GSTA4O15217 222 aa7.87□□□□□ -1.15
CUL3-211ENST00000487558 C1QTNF9P0C862 333 aa7.87□□□□□ -1.15
CUL3-211ENST00000487558 KCNA6P17658 529 aa7.87□□□□□ -1.15
CUL3-211ENST00000487558 GUCY2FP51841 1108 aa7.87□□□□□ -1.15
CUL3-211ENST00000487558 SART3Q15020 963 aaKnown RBP7.87□□□□□ -1.15
CUL3-211ENST00000487558 BRDTQ58F21 947 aaPredicted RBP7.87□□□□□ -1.15
CUL3-211ENST00000487558 SIAH1Q8IUQ4 282 aa7.87□□□□□ -1.15
CUL3-211ENST00000487558 SYTL4Q96C24 671 aaPredicted RBP7.87□□□□□ -1.15
CUL3-211ENST00000487558 CCDC120Q96HB5 630 aa7.87□□□□□ -1.15
CUL3-211ENST00000487558 ALPK1Q96QP1 1244 aa7.87□□□□□ -1.15
CUL3-211ENST00000487558 TTC1Q99614 292 aa7.87□□□□□ -1.15
CUL3-211ENST00000487558 PCDHA11Q9Y5I1 949 aa7.87□□□□□ -1.15
CUL3-211ENST00000487558 WASHC2CQ9Y4E1 1318 aa7.86□□□□□ -1.15
CUL3-211ENST00000487558 ZEB2O60315 1214 aa7.86□□□□□ -1.15
CUL3-211ENST00000487558 MSCO60682 206 aa7.86□□□□□ -1.15
CUL3-211ENST00000487558 LCP1P13796 627 aa7.86□□□□□ -1.15
CUL3-211ENST00000487558 RPL10P27635 214 aaKnown RBP7.86□□□□□ -1.15
CUL3-211ENST00000487558 GTF2A2P52657 109 aa7.86□□□□□ -1.15
CUL3-211ENST00000487558 EGR3Q06889 387 aa7.86□□□□□ -1.15
CUL3-211ENST00000487558 FAM50AQ14320 339 aaKnown RBP7.86□□□□□ -1.15
CUL3-211ENST00000487558 SEPT7Q16181 437 aaKnown RBP7.86□□□□□ -1.15
CUL3-211ENST00000487558 FAM47CQ5HY64 1035 aa7.86□□□□□ -1.15
CUL3-211ENST00000487558 ODR4Q5SWX8 454 aa7.86□□□□□ -1.15
CUL3-211ENST00000487558 ZSCAN18Q8TBC5 510 aaPredicted RBP7.86□□□□□ -1.15
CUL3-211ENST00000487558 IFT22Q9H7X7 185 aa7.86□□□□□ -1.15
CUL3-211ENST00000487558 G3BP2Q9UN86 482 aaKnown RBP7.86□□□□□ -1.15
CUL3-211ENST00000487558 PCDHA2Q9Y5H9 948 aa7.86□□□□□ -1.15
CUL3-211ENST00000487558 TIMM13Q9Y5L4 95 aaPredicted RBP7.86□□□□□ -1.15
CUL3-211ENST00000487558 SRGAP2CP0DJJ0 459 aa7.85□□□□□ -1.15
CUL3-211ENST00000487558 LSAMPQ13449 338 aa7.85□□□□□ -1.15
CUL3-211ENST00000487558 LAPTM5Q13571 262 aa7.85□□□□□ -1.15
CUL3-211ENST00000487558 HLA-DQA1Q5Y7H0 255 aa7.85□□□□□ -1.15
CUL3-211ENST00000487558 WAPLQ7Z5K2 1190 aa7.85□□□□□ -1.15
CUL3-211ENST00000487558 NECAB2Q7Z6G3 386 aa7.85□□□□□ -1.15
CUL3-211ENST00000487558 CPNE8Q86YQ8 564 aa7.85□□□□□ -1.15
CUL3-211ENST00000487558 IGSF22Q8N9C0 903 aa7.85□□□□□ -1.15
CUL3-211ENST00000487558 FBXO15Q8NCQ5 510 aaPredicted RBP7.85□□□□□ -1.15
CUL3-211ENST00000487558 PCDH19Q8TAB3 1148 aa7.85□□□□□ -1.15
CUL3-211ENST00000487558 PANK1Q8TE04 598 aa7.85□□□□□ -1.15
CUL3-211ENST00000487558 CHAMP1Q96JM3 812 aa7.85□□□□□ -1.15
CUL3-211ENST00000487558 NSUN3Q9H649 340 aaKnown RBP7.85□□□□□ -1.15
CUL3-211ENST00000487558 CABP5Q9NP86 173 aa7.85□□□□□ -1.15
CUL3-211ENST00000487558 ZKSCAN5Q9Y2L8 839 aa7.85□□□□□ -1.15
CUL3-211ENST00000487558 PHLDB1Q86UU1 1377 aa7.84□□□□□ -1.15
CUL3-211ENST00000487558 FAM47E-STBD1D6RA91 191 aa7.84□□□□□ -1.15
CUL3-211ENST00000487558 NPHS1O60500 1241 aa7.84□□□□□ -1.15
CUL3-211ENST00000487558 ESR1P03372 595 aa7.84□□□□□ -1.15
CUL3-211ENST00000487558 SOD2P04179 222 aa7.84□□□□□ -1.15
CUL3-211ENST00000487558 ST5P78524 1137 aa7.84□□□□□ -1.15
CUL3-211ENST00000487558 TEKQ02763 1124 aa7.84□□□□□ -1.15
CUL3-211ENST00000487558 STAT4Q14765 748 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms