RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 B4GALT4O60513 344 aa18.31■□□□□ 0.52
GABPA-203ENST00000487266 USP17L6PQ6QN14 398 aa18.31■□□□□ 0.52
GABPA-203ENST00000487266 AFG1LQ8WV93 481 aa18.31■□□□□ 0.52
GABPA-203ENST00000487266 LZTS2Q9BRK4 669 aa18.31■□□□□ 0.52
GABPA-203ENST00000487266 TRPV6Q9H1D0 765 aa18.31■□□□□ 0.52
GABPA-203ENST00000487266 MRVI1Q9Y6F6 885 aa18.31■□□□□ 0.52
GABPA-203ENST00000487266 UMODL1Q5DID0 1318 aa18.3■□□□□ 0.52
GABPA-203ENST00000487266 GOLGA8AA7E2F4 631 aa18.3■□□□□ 0.52
GABPA-203ENST00000487266 GOLGA8BA8MQT2 603 aa18.3■□□□□ 0.52
GABPA-203ENST00000487266 ZBTB43O43298 467 aa18.3■□□□□ 0.52
GABPA-203ENST00000487266 EIF3JO75822 258 aaKnown RBP18.3■□□□□ 0.52
GABPA-203ENST00000487266 CABYRO75952 493 aa18.3■□□□□ 0.52
GABPA-203ENST00000487266 REC8O95072 547 aa18.3■□□□□ 0.52
GABPA-203ENST00000487266 CD4P01730 458 aa18.3■□□□□ 0.52
GABPA-203ENST00000487266 CENPBP07199 599 aaPredicted RBP18.3■□□□□ 0.52
GABPA-203ENST00000487266 SMARCA1P28370 1054 aa18.3■□□□□ 0.52
GABPA-203ENST00000487266 APOBRQ0VD83 1088 aa18.3■□□□□ 0.52
GABPA-203ENST00000487266 TRAF1Q13077 416 aa18.3■□□□□ 0.52
GABPA-203ENST00000487266 SHHQ15465 462 aa18.3■□□□□ 0.52
GABPA-203ENST00000487266 RTN1Q16799 776 aa18.3■□□□□ 0.52
GABPA-203ENST00000487266 Q6ZUG5 572 aa18.3■□□□□ 0.52
GABPA-203ENST00000487266 MAP3K20Q9NYL2 800 aaKnown RBP18.3■□□□□ 0.52
GABPA-203ENST00000487266 DDX41Q9UJV9 622 aaKnown RBP18.3■□□□□ 0.52
GABPA-203ENST00000487266 NAP1L2Q9ULW6 460 aaPredicted RBP18.3■□□□□ 0.52
GABPA-203ENST00000487266 FRMPD4Q14CM0 1322 aa18.29■□□□□ 0.52
GABPA-203ENST00000487266 A6NJR5 290 aa18.29■□□□□ 0.52
GABPA-203ENST00000487266 MEIS2O14770 477 aa18.29■□□□□ 0.52
GABPA-203ENST00000487266 GH1P01241 217 aa18.29■□□□□ 0.52
GABPA-203ENST00000487266 MMP3P08254 477 aa18.29■□□□□ 0.52
GABPA-203ENST00000487266 CDC27P30260 824 aa18.29■□□□□ 0.52
GABPA-203ENST00000487266 UBE2SQ16763 222 aa18.29■□□□□ 0.52
GABPA-203ENST00000487266 LRIT3Q3SXY7 679 aa18.29■□□□□ 0.52
GABPA-203ENST00000487266 SYNE3Q6ZMZ3 975 aa18.29■□□□□ 0.52
GABPA-203ENST00000487266 HEATR3Q7Z4Q2 680 aa18.29■□□□□ 0.52
GABPA-203ENST00000487266 SMARCC2Q8TAQ2 1214 aa18.29■□□□□ 0.52
GABPA-203ENST00000487266 MTG1Q9BT17 334 aaPredicted RBP18.29■□□□□ 0.52
GABPA-203ENST00000487266 FAM217BQ9NTX9 383 aaPredicted RBP18.29■□□□□ 0.52
GABPA-203ENST00000487266 TRMT13Q9NUP7 481 aaKnown RBP18.29■□□□□ 0.52
GABPA-203ENST00000487266 POLR3EQ9NVU0 708 aa18.29■□□□□ 0.52
GABPA-203ENST00000487266 TLR3O15455 904 aaKnown RBP18.28■□□□□ 0.52
GABPA-203ENST00000487266 TIMP1P01033 207 aa18.28■□□□□ 0.52
GABPA-203ENST00000487266 HMGB1P09429 215 aaKnown RBP18.28■□□□□ 0.52
GABPA-203ENST00000487266 CCND2P30279 289 aa18.28■□□□□ 0.52
GABPA-203ENST00000487266 CHMP4BP1P59074 171 aa18.28■□□□□ 0.52
GABPA-203ENST00000487266 MRPS9P82933 396 aaKnown RBP18.28■□□□□ 0.52
GABPA-203ENST00000487266 FGD1P98174 961 aa18.28■□□□□ 0.52
GABPA-203ENST00000487266 FPGSQ05932 587 aa18.28■□□□□ 0.52
GABPA-203ENST00000487266 FUT2Q10981 343 aa18.28■□□□□ 0.52
GABPA-203ENST00000487266 WWC2Q6AWC2 1192 aa18.28■□□□□ 0.52
GABPA-203ENST00000487266 TYW1BQ6NUM6 668 aa18.28■□□□□ 0.52
GABPA-203ENST00000487266 BLOC1S2Q6QNY1 142 aa18.28■□□□□ 0.52
GABPA-203ENST00000487266 VSIG10LQ86VR7 867 aa18.28■□□□□ 0.52
GABPA-203ENST00000487266 SAMD3Q8N6K7 520 aa18.28■□□□□ 0.52
GABPA-203ENST00000487266 BRF1Q92994 677 aa18.28■□□□□ 0.52
GABPA-203ENST00000487266 ALDH8A1Q9H2A2 487 aaPredicted RBP18.28■□□□□ 0.52
GABPA-203ENST00000487266 CASTP20810 708 aaKnown RBP18.27■□□□□ 0.52
GABPA-203ENST00000487266 UBA1P22314 1058 aaKnown RBP18.27■□□□□ 0.52
GABPA-203ENST00000487266 RPS6KB1P23443 525 aa18.27■□□□□ 0.52
GABPA-203ENST00000487266 CYP2C18P33260 490 aa18.27■□□□□ 0.52
GABPA-203ENST00000487266 SP2Q02086 613 aa18.27■□□□□ 0.52
GABPA-203ENST00000487266 NBPF20Q3BBV1 942 aa18.27■□□□□ 0.52
GABPA-203ENST00000487266 FAM47CQ5HY64 1035 aa18.27■□□□□ 0.52
GABPA-203ENST00000487266 BCAS3Q9H6U6 928 aa18.27■□□□□ 0.52
GABPA-203ENST00000487266 RBM28Q9NW13 759 aaKnown RBP18.27■□□□□ 0.52
GABPA-203ENST00000487266 RTEL1Q9NZ71 1219 aa18.27■□□□□ 0.52
GABPA-203ENST00000487266 RBAK-RBAKDNI3L0D1 243 aa18.26■□□□□ 0.51
GABPA-203ENST00000487266 ZNF286BP0CG31 522 aa18.26■□□□□ 0.51
GABPA-203ENST00000487266 BRDTQ58F21 947 aaPredicted RBP18.26■□□□□ 0.51
GABPA-203ENST00000487266 ERICH6BQ5W0A0 696 aa18.26■□□□□ 0.51
GABPA-203ENST00000487266 Q7L0L9 218 aa18.26■□□□□ 0.51
GABPA-203ENST00000487266 KAT2BQ92831 832 aa18.26■□□□□ 0.51
GABPA-203ENST00000487266 CUL5Q93034 780 aa18.26■□□□□ 0.51
GABPA-203ENST00000487266 SCN5AQ14524 2016 aa18.26■□□□□ 0.51
GABPA-203ENST00000487266 TANC1Q9C0D5 1861 aa18.25■□□□□ 0.51
GABPA-203ENST00000487266 PIK3CDO00329 1044 aa18.25■□□□□ 0.51
GABPA-203ENST00000487266 PPFIA3O75145 1194 aa18.25■□□□□ 0.51
GABPA-203ENST00000487266 GGPS1O95749 300 aa18.25■□□□□ 0.51
GABPA-203ENST00000487266 ACRP10323 421 aa18.25■□□□□ 0.51
GABPA-203ENST00000487266 CYP2C9P11712 490 aa18.25■□□□□ 0.51
GABPA-203ENST00000487266 CSF2RAP15509 400 aa18.25■□□□□ 0.51
GABPA-203ENST00000487266 ADD1P35611 737 aaKnown RBP18.25■□□□□ 0.51
GABPA-203ENST00000487266 METAP2P50579 478 aaKnown RBP eCLIP18.25■□□□□ 0.51
GABPA-203ENST00000487266 SEMA3FQ13275 785 aa18.25■□□□□ 0.51
GABPA-203ENST00000487266 MFSD5Q6N075 450 aa18.25■□□□□ 0.51
GABPA-203ENST00000487266 NOC4LQ9BVI4 516 aaKnown RBP18.25■□□□□ 0.51
GABPA-203ENST00000487266 USP26Q9BXU7 913 aa18.25■□□□□ 0.51
GABPA-203ENST00000487266 WNT8AQ9H1J5 351 aa18.25■□□□□ 0.51
GABPA-203ENST00000487266 HIPK3Q9H422 1215 aa18.25■□□□□ 0.51
GABPA-203ENST00000487266 PSTPIP2Q9H939 334 aa18.25■□□□□ 0.51
GABPA-203ENST00000487266 TELO2Q9Y4R8 837 aa18.25■□□□□ 0.51
GABPA-203ENST00000487266 CCL23P55773 120 aa18.24■□□□□ 0.51
GABPA-203ENST00000487266 HSDL1Q3SXM5 330 aa18.24■□□□□ 0.51
GABPA-203ENST00000487266 CELF3Q5SZQ8 465 aaKnown RBP18.24■□□□□ 0.51
GABPA-203ENST00000487266 MYSM1Q5VVJ2 828 aa18.24■□□□□ 0.51
GABPA-203ENST00000487266 DHX37Q8IY37 1157 aaKnown RBP18.24■□□□□ 0.51
GABPA-203ENST00000487266 EMID1Q96A84 441 aaPredicted RBP18.24■□□□□ 0.51
GABPA-203ENST00000487266 PGBD1Q96JS3 809 aa18.24■□□□□ 0.51
GABPA-203ENST00000487266 RNPC3Q96LT9 517 aaKnown RBP18.24■□□□□ 0.51
GABPA-203ENST00000487266 V9GY48 417 aaPredicted RBP18.24■□□□□ 0.51
GABPA-203ENST00000487266 CDH23Q9H251 3354 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms