RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 POTEB3A0JP26 581 aa17.58■□□□□ 0.4
PFDN4-204ENST00000487129 PARNO95453 639 aaKnown RBP17.58■□□□□ 0.4
PFDN4-204ENST00000487129 PDHBP11177 359 aa17.58■□□□□ 0.4
PFDN4-204ENST00000487129 CHMP4BP1P59074 171 aa17.58■□□□□ 0.4
PFDN4-204ENST00000487129 NHLH1Q02575 133 aa17.58■□□□□ 0.4
PFDN4-204ENST00000487129 COL19A1Q14993 1142 aa17.58■□□□□ 0.4
PFDN4-204ENST00000487129 POTEBQ6S5H4 581 aa17.58■□□□□ 0.4
PFDN4-204ENST00000487129 DCTPP1Q9H773 170 aa17.58■□□□□ 0.4
PFDN4-204ENST00000487129 GPCPD1Q9NPB8 672 aa17.58■□□□□ 0.4
PFDN4-204ENST00000487129 RANBP6O60518 1105 aaKnown RBP17.57■□□□□ 0.4
PFDN4-204ENST00000487129 HIC1Q14526 733 aa17.57■□□□□ 0.4
PFDN4-204ENST00000487129 LY6KQ17RY6 165 aa17.57■□□□□ 0.4
PFDN4-204ENST00000487129 C20orf194Q5TEA3 1177 aa17.57■□□□□ 0.4
PFDN4-204ENST00000487129 VPS53Q5VIR6 699 aa17.57■□□□□ 0.4
PFDN4-204ENST00000487129 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.57■□□□□ 0.49e-8■□□□□ 10.9
PFDN4-204ENST00000487129 SP7Q8TDD2 431 aaPredicted RBP17.57■□□□□ 0.4
PFDN4-204ENST00000487129 GPATCH3Q96I76 525 aa17.57■□□□□ 0.4
PFDN4-204ENST00000487129 HDAC6Q9UBN7 1215 aa17.57■□□□□ 0.4
PFDN4-204ENST00000487129 ZNF318Q5VUA4 2279 aa17.57■□□□□ 0.4
PFDN4-204ENST00000487129 HAS3O00219 553 aa17.56■□□□□ 0.4
PFDN4-204ENST00000487129 SNHG28P0DPA3 235 aa17.56■□□□□ 0.4
PFDN4-204ENST00000487129 TOP1P11387 765 aaKnown RBP17.56■□□□□ 0.4
PFDN4-204ENST00000487129 ALADP13716 330 aa17.56■□□□□ 0.4
PFDN4-204ENST00000487129 SSTR3P32745 418 aaPredicted RBP17.56■□□□□ 0.4
PFDN4-204ENST00000487129 HTRA4P83105 476 aaPredicted RBP17.56■□□□□ 0.4
PFDN4-204ENST00000487129 ZNF543Q08ER8 600 aa17.56■□□□□ 0.4
PFDN4-204ENST00000487129 ZNF618Q5T7W0 954 aa17.56■□□□□ 0.4
PFDN4-204ENST00000487129 FAM117BQ6P1L5 589 aa17.56■□□□□ 0.4
PFDN4-204ENST00000487129 OTUD7AQ8TE49 926 aaPredicted RBP17.56■□□□□ 0.4
PFDN4-204ENST00000487129 FBXL18Q96ME1 805 aa17.56■□□□□ 0.4
PFDN4-204ENST00000487129 COL20A1Q9P218 1284 aa17.56■□□□□ 0.4
PFDN4-204ENST00000487129 H3BQ06 376 aaPredicted RBP17.55■□□□□ 0.4
PFDN4-204ENST00000487129 F2P00734 622 aa17.55■□□□□ 0.4
PFDN4-204ENST00000487129 ZP2Q05996 745 aa17.55■□□□□ 0.4
PFDN4-204ENST00000487129 RGS22Q8NE09 1264 aa17.55■□□□□ 0.4
PFDN4-204ENST00000487129 FBXO22Q8NEZ5 403 aa17.55■□□□□ 0.4
PFDN4-204ENST00000487129 TBC1D5Q92609 795 aa17.55■□□□□ 0.4
PFDN4-204ENST00000487129 ANKS1AQ92625 1134 aa17.55■□□□□ 0.4
PFDN4-204ENST00000487129 MRPL38Q96DV4 380 aaKnown RBP17.55■□□□□ 0.4
PFDN4-204ENST00000487129 CHMP4BQ9H444 224 aaKnown RBP17.55■□□□□ 0.4
PFDN4-204ENST00000487129 TCP11L1Q9NUJ3 509 aa17.55■□□□□ 0.4
PFDN4-204ENST00000487129 TTC41PQ6P2S7 1318 aa17.54■□□□□ 0.4
PFDN4-204ENST00000487129 C19orf67A6NJJ6 358 aa17.54■□□□□ 0.4
PFDN4-204ENST00000487129 DCXO43602 365 aa17.54■□□□□ 0.4
PFDN4-204ENST00000487129 EFCAB14O75071 495 aa17.54■□□□□ 0.4
PFDN4-204ENST00000487129 GH1P01241 217 aa17.54■□□□□ 0.4
PFDN4-204ENST00000487129 ZNF200P98182 395 aaPredicted RBP17.54■□□□□ 0.4
PFDN4-204ENST00000487129 PTK7Q13308 1070 aa17.54■□□□□ 0.4
PFDN4-204ENST00000487129 IKBKEQ14164 716 aa17.54■□□□□ 0.4
PFDN4-204ENST00000487129 UIMC1Q96RL1 719 aa17.54■□□□□ 0.4
PFDN4-204ENST00000487129 FSD1Q9BTV5 496 aa17.54■□□□□ 0.4
PFDN4-204ENST00000487129 PNMA2Q9UL42 364 aa17.54■□□□□ 0.4
PFDN4-204ENST00000487129 INSL6Q9Y581 213 aa17.54■□□□□ 0.4
PFDN4-204ENST00000487129 TRIOO75962 3097 aa17.54■□□□□ 0.4
PFDN4-204ENST00000487129 COL4A6Q14031 1691 aa17.54■□□□□ 0.4
PFDN4-204ENST00000487129 LGR5O75473 907 aa17.53■□□□□ 0.4
PFDN4-204ENST00000487129 HOXD8P13378 290 aaPredicted RBP17.53■□□□□ 0.4
PFDN4-204ENST00000487129 PSEN2P49810 448 aa17.53■□□□□ 0.4
PFDN4-204ENST00000487129 PUS10Q3MIT2 529 aaKnown RBP17.53■□□□□ 0.4
PFDN4-204ENST00000487129 SEPT14Q6ZU15 432 aa17.53■□□□□ 0.4
PFDN4-204ENST00000487129 EMID1Q96A84 441 aaPredicted RBP17.53■□□□□ 0.4
PFDN4-204ENST00000487129 TAAR1Q96RJ0 339 aa17.53■□□□□ 0.4
PFDN4-204ENST00000487129 MPHOSPH6Q99547 160 aaKnown RBP17.53■□□□□ 0.4
PFDN4-204ENST00000487129 CPVLQ9H3G5 476 aa17.53■□□□□ 0.4
PFDN4-204ENST00000487129 MICAL3Q7RTP6 2002 aa17.52■□□□□ 0.4
PFDN4-204ENST00000487129 CASTP20810 708 aaKnown RBP17.52■□□□□ 0.4
PFDN4-204ENST00000487129 MFSD10Q14728 455 aa17.52■□□□□ 0.4
PFDN4-204ENST00000487129 ALX1Q15699 326 aa17.52■□□□□ 0.4
PFDN4-204ENST00000487129 DGKDQ16760 1214 aa17.52■□□□□ 0.4
PFDN4-204ENST00000487129 EPC2Q52LR7 807 aa17.52■□□□□ 0.4
PFDN4-204ENST00000487129 TCEAL5Q5H9L2 206 aa17.52■□□□□ 0.4
PFDN4-204ENST00000487129 CHST3Q7LGC8 479 aa17.52■□□□□ 0.4
PFDN4-204ENST00000487129 DBF4BQ8NFT6 615 aa17.52■□□□□ 0.4
PFDN4-204ENST00000487129 SYTL5Q8TDW5 730 aaPredicted RBP17.52■□□□□ 0.4
PFDN4-204ENST00000487129 OSBPL7Q9BZF2 842 aa17.52■□□□□ 0.4
PFDN4-204ENST00000487129 KCNH6Q9H252 994 aa17.52■□□□□ 0.4
PFDN4-204ENST00000487129 DDX41Q9UJV9 622 aaKnown RBP17.52■□□□□ 0.4
PFDN4-204ENST00000487129 SALL3Q9BXA9 1300 aa17.51■□□□□ 0.39
PFDN4-204ENST00000487129 C5orf42Q9H799 3197 aa17.51■□□□□ 0.39
PFDN4-204ENST00000487129 KIAA1217Q5T5P2 1943 aa17.51■□□□□ 0.39
PFDN4-204ENST00000487129 ZNF286BP0CG31 522 aa17.51■□□□□ 0.39
PFDN4-204ENST00000487129 KIAA0753Q2KHM9 967 aa17.51■□□□□ 0.39
PFDN4-204ENST00000487129 USH1GQ495M9 461 aa17.51■□□□□ 0.39
PFDN4-204ENST00000487129 HFE2Q6ZVN8 426 aa17.51■□□□□ 0.39
PFDN4-204ENST00000487129 C7orf31Q8N865 590 aa17.51■□□□□ 0.39
PFDN4-204ENST00000487129 BANK1Q8NDB2 785 aa17.51■□□□□ 0.39
PFDN4-204ENST00000487129 PABPC5Q96DU9 382 aaKnown RBP17.51■□□□□ 0.39
PFDN4-204ENST00000487129 ALG1Q9BT22 464 aa17.51■□□□□ 0.39
PFDN4-204ENST00000487129 B4DLN1 442 aa17.5■□□□□ 0.39
PFDN4-204ENST00000487129 H3BNC9 293 aa17.5■□□□□ 0.39
PFDN4-204ENST00000487129 LTBRP36941 435 aa17.5■□□□□ 0.39
PFDN4-204ENST00000487129 MRPL12P52815 198 aaKnown RBP17.5■□□□□ 0.39
PFDN4-204ENST00000487129 CSPP1Q1MSJ5 1256 aa17.5■□□□□ 0.39
PFDN4-204ENST00000487129 TIGD5Q53EQ6 642 aa17.5■□□□□ 0.39
PFDN4-204ENST00000487129 PLEKHG4Q58EX7 1191 aa17.5■□□□□ 0.39
PFDN4-204ENST00000487129 SERINC5Q86VE9 423 aa17.5■□□□□ 0.39
PFDN4-204ENST00000487129 MYOCDQ8IZQ8 938 aa17.5■□□□□ 0.39
PFDN4-204ENST00000487129 PPTC7Q8NI37 304 aa17.5■□□□□ 0.39
PFDN4-204ENST00000487129 MAF1Q9H063 256 aa17.5■□□□□ 0.39
PFDN4-204ENST00000487129 ATG2AQ2TAZ0 1938 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms