RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 A0A087X0B3 334 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 SMTNL1A8MU46 457 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 BIN1O00499 593 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 SLC37A4O43826 429 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 MYL1P05976 194 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 CYP3A4P08684 503 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 ALAS1P13196 640 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 HOXA13P31271 388 aaPredicted RBP7.94□□□□□ -1.14
SF3A3-206ENST00000487062 CIITAP33076 1130 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 AFMP43652 599 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 OAZ1P54368 228 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 PPATQ06203 517 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 SEMA3FQ13275 785 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 DSG2Q14126 1118 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 VGLL4Q14135 290 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 COG2Q14746 738 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 KARSQ15046 597 aaKnown RBP7.94□□□□□ -1.14
SF3A3-206ENST00000487062 Q4G0T1 1027 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 EAPPQ56P03 285 aaPredicted RBP7.94□□□□□ -1.14
SF3A3-206ENST00000487062 NT5DC1Q5TFE4 455 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 KRT79Q5XKE5 535 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.94□□□□□ -1.14
SF3A3-206ENST00000487062 C11orf57Q6ZUT1 292 aaPredicted RBP7.94□□□□□ -1.14
SF3A3-206ENST00000487062 ARMC9Q7Z3E5 817 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 SH3RF1Q7Z6J0 888 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 FCHSD1Q86WN1 690 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 ERO1BQ86YB8 467 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 IGSF22Q8N9C0 903 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 CRYGNQ8WXF5 182 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 ERCC4Q92889 916 aaPredicted RBP7.94□□□□□ -1.14
SF3A3-206ENST00000487062 CCDC47Q96A33 483 aaKnown RBP7.94□□□□□ -1.14
SF3A3-206ENST00000487062 TRIM44Q96DX7 344 aaPredicted RBP7.94□□□□□ -1.14
SF3A3-206ENST00000487062 PAGE5Q96GU1 130 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 MBOAT7Q96N66 472 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 GSDMAQ96QA5 445 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 MAF1Q9H063 256 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 TTC12Q9H892 705 aaPredicted RBP7.94□□□□□ -1.14
SF3A3-206ENST00000487062 RMND1Q9NWS8 449 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 PCDHA12Q9UN75 941 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 FZD1Q9UP38 647 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 SNCAIPQ9Y6H5 919 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 LOC285556D6RIA3 1793 aa7.94□□□□□ -1.14
SF3A3-206ENST00000487062 VWA5AO00534 786 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 OPLAHO14841 1288 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 FOXN1O15353 648 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 EDIL3O43854 480 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 SARSP49591 514 aaKnown RBP7.93□□□□□ -1.14
SF3A3-206ENST00000487062 HSD17B4P51659 736 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 AMPD3Q01432 767 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 GHRHRQ02643 423 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 IQCB1Q15051 598 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 TKFCQ3LXA3 575 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 CT47A1Q5JQC4 288 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-206ENST00000487062 PDXDC2PQ6P474 469 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 CATSPERGQ6ZRH7 1159 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 LUZP1Q86V48 1076 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 CPXCR1Q8N123 301 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 MLKLQ8NB16 471 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 ERMNQ8TAM6 284 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 ATG4CQ96DT6 458 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 AGBL1Q96MI9 1066 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 FAM20AQ96MK3 541 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 GTPBP4Q9BZE4 634 aaKnown RBP7.93□□□□□ -1.14
SF3A3-206ENST00000487062 LRRC27Q9C0I9 530 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 NT5C3AQ9H0P0 336 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 RAVER2Q9HCJ3 691 aaKnown RBP7.93□□□□□ -1.14
SF3A3-206ENST00000487062 KCNMB3Q9NPA1 279 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 HOXC10Q9NYD6 342 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 STK17AQ9UEE5 414 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 MAN1B1Q9UKM7 699 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 ZNF536O15090 1300 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 KDM3AQ9Y4C1 1321 aa7.93□□□□□ -1.14
SF3A3-206ENST00000487062 SPDYE5A6NIY4 337 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 UNCXA6NJT0 531 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 PP2D1A8MPX8 630 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 CXCL11O14625 94 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 IKBKBO14920 756 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 TAL1P17542 331 aaPredicted RBP7.92□□□□□ -1.14
SF3A3-206ENST00000487062 PLCG1P19174 1290 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 CDC25AP30304 524 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 SETQ01105 290 aaPredicted RBP7.92□□□□□ -1.14
SF3A3-206ENST00000487062 DPYDQ12882 1025 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 DGKZQ13574 1117 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 MORC3Q14149 939 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 DPCR1Q3MIW9 517 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 PRR16Q569H4 304 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 ISM2Q6H9L7 571 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 GRAMD1CQ8IYS0 662 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 AOPEPQ8N6M6 819 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 PROCA1Q8NCQ7 364 aaPredicted RBP7.92□□□□□ -1.14
SF3A3-206ENST00000487062 SPATA20Q8TB22 786 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 SNX29Q8TEQ0 813 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 TBC1D5Q92609 795 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 HAS1Q92839 578 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 PDLIM2Q96JY6 352 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 TRERF1Q96PN7 1200 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 ELP3Q9H9T3 547 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 ADAMTS5Q9UNA0 930 aa7.92□□□□□ -1.14
SF3A3-206ENST00000487062 LOXHD1Q8IVV2 1947 aa7.91□□□□□ -1.14
SF3A3-206ENST00000487062 A0A0G2JLL6 359 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms