RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 GUF1Q8N442 669 aaKnown RBP13.51□□□□□ -0.25
COL3A1-206ENST00000487010 ANKRD13CQ8N6S4 541 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 ZIM3Q96PE6 472 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 SPZ1Q9BXG8 430 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 C6orf50Q9HD87 102 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 GDF3Q9NR23 364 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 BLOC1S4Q9NUP1 217 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 RNF14Q9UBS8 474 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 ZNF335Q9H4Z2 1342 aaPredicted RBP13.51□□□□□ -0.25
COL3A1-206ENST00000487010 KLRF2D3W0D1 207 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 GOLGA8HP0CJ92 632 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 GNA11P29992 359 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 SLC1A4P43007 532 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 LRRC63Q05C16 580 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 CFAP221Q4G0U5 840 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 HGSNATQ68CP4 663 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 TTC19Q6DKK2 380 aaPredicted RBP13.51□□□□□ -0.25
COL3A1-206ENST00000487010 DZIP1Q86YF9 867 aaKnown RBP13.51□□□□□ -0.25
COL3A1-206ENST00000487010 SUGP1Q8IWZ8 645 aaKnown RBP13.51□□□□□ -0.25
COL3A1-206ENST00000487010 IFT20Q8IY31 132 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 ZNF444Q8N0Y2 327 aaPredicted RBP13.51□□□□□ -0.25
COL3A1-206ENST00000487010 MS4A14Q96JA4 679 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 RABEP2Q9H5N1 569 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 STK17AQ9UEE5 414 aa13.51□□□□□ -0.25
COL3A1-206ENST00000487010 RBAK-RBAKDNI3L0D1 243 aa13.5□□□□□ -0.25
COL3A1-206ENST00000487010 BUB1O43683 1085 aa13.5□□□□□ -0.25
COL3A1-206ENST00000487010 LIG3P49916 1009 aa13.5□□□□□ -0.25
COL3A1-206ENST00000487010 ORC2Q13416 577 aaPredicted RBP13.5□□□□□ -0.25
COL3A1-206ENST00000487010 SPTY2D1Q68D10 685 aaPredicted RBP13.5□□□□□ -0.25
COL3A1-206ENST00000487010 MMS22LQ6ZRQ5 1243 aa13.5□□□□□ -0.25
COL3A1-206ENST00000487010 LRRC55Q6ZSA7 311 aa13.5□□□□□ -0.25
COL3A1-206ENST00000487010 GPIHBP1Q8IV16 184 aa13.5□□□□□ -0.25
COL3A1-206ENST00000487010 TBCKQ8TEA7 893 aa13.5□□□□□ -0.25
COL3A1-206ENST00000487010 PNMA5Q96PV4 448 aa13.5□□□□□ -0.25
COL3A1-206ENST00000487010 CLSTN1O94985 981 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 GLI1P08151 1106 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 TXKP42681 527 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 RPS8P62241 208 aaKnown RBP13.49□□□□□ -0.25
COL3A1-206ENST00000487010 ATP2B2Q01814 1243 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 APBA1Q02410 837 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 KCNMA1Q12791 1236 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 ARHGAP27Q6ZUM4 889 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 DYMQ7RTS9 669 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 CACNA2D4Q7Z3S7 1137 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 IQCKQ8N0W5 287 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 SH3RF3Q8TEJ3 882 aaPredicted RBP13.49□□□□□ -0.25
COL3A1-206ENST00000487010 CPVLQ9H3G5 476 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 STX8Q9UNK0 236 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 JAG2Q9Y219 1238 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 GUCY2CP25092 1073 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 HOXA7P31268 230 aaPredicted RBP13.49□□□□□ -0.25
COL3A1-206ENST00000487010 CARSP49589 748 aaKnown RBP13.49□□□□□ -0.25
COL3A1-206ENST00000487010 NAP1L1P55209 391 aaKnown RBP13.49□□□□□ -0.25
COL3A1-206ENST00000487010 SLC10A5Q5PT55 438 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 LARP4BQ92615 738 aaKnown RBP13.49□□□□□ -0.25
COL3A1-206ENST00000487010 CCDC43Q96MW1 224 aaKnown RBP13.49□□□□□ -0.25
COL3A1-206ENST00000487010 MTMR9Q96QG7 549 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 ANKRD2Q9GZV1 360 aa13.49□□□□□ -0.25
COL3A1-206ENST00000487010 FAM153BP0C7A2 387 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 FXR2P51116 673 aaKnown RBP eCLIP13.48□□□□□ -0.25
COL3A1-206ENST00000487010 PAK2Q13177 524 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 PDCLQ13371 301 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 FAM153CQ494X1 144 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 CFAP58Q5T655 872 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 SOGA3Q5TF21 947 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 FOXR2Q6PJQ5 311 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 B4GALNT4Q76KP1 1039 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 MREGQ8N565 214 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 SH2D3CQ8N5H7 860 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 SLC44A5Q8NCS7 719 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 SYN2Q92777 582 aaPredicted RBP13.48□□□□□ -0.25
COL3A1-206ENST00000487010 KAT2BQ92831 832 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 TSG101Q99816 390 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 NUCKS1Q9H1E3 243 aaKnown RBP13.48□□□□□ -0.25
COL3A1-206ENST00000487010 EPB41L5Q9HCM4 733 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 RIC8AQ9NPQ8 531 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 FAM153AQ9UHL3 310 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 NFU1Q9UMS0 254 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 SAMM50Q9Y512 469 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 HEXIM1O94992 359 aaKnown RBP13.48□□□□□ -0.25
COL3A1-206ENST00000487010 KRT14P02533 472 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 SERPING1P05155 500 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 RASA1P20936 1047 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 INPP5BP32019 993 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 GUCY2DQ02846 1103 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 EHHADHQ08426 723 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 PSMD2Q13200 908 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 CALCRLQ16602 461 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 SLC9C1Q4G0N8 1177 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 TDRD12Q587J7 1177 aaKnown RBP13.48□□□□□ -0.25
COL3A1-206ENST00000487010 EMC10Q5UCC4 262 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 KCTD16Q68DU8 428 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 KDM7AQ6ZMT4 941 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 TXNRD3Q86VQ6 643 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 CD302Q8IX05 232 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 CDK5RAP3Q96JB5 506 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 ATXN2Q99700 1313 aaKnown RBP13.48□□□□□ -0.25
COL3A1-206ENST00000487010 TANGO6Q9C0B7 1094 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 CEP72Q9P209 647 aa13.48□□□□□ -0.25
COL3A1-206ENST00000487010 BIN2Q9UBW5 565 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms