RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 FOXO4P98177 505 aa6.22□□□□□ -1.41
SNRNP40-205ENST00000486941 NOL9Q5SY16 702 aaKnown RBP6.22□□□□□ -1.41
SNRNP40-205ENST00000486941 CCDC81Q6ZN84 652 aa6.22□□□□□ -1.41
SNRNP40-205ENST00000486941 THEMISQ8N1K5 641 aaPredicted RBP6.22□□□□□ -1.41
SNRNP40-205ENST00000486941 NAT16Q8N8M0 369 aa6.22□□□□□ -1.41
SNRNP40-205ENST00000486941 NLGN2Q8NFZ4 835 aa6.22□□□□□ -1.41
SNRNP40-205ENST00000486941 FNIP1Q8TF40 1166 aa6.22□□□□□ -1.41
SNRNP40-205ENST00000486941 ZNF526Q8TF50 670 aaPredicted RBP6.22□□□□□ -1.41
SNRNP40-205ENST00000486941 FERD3LQ96RJ6 166 aa6.22□□□□□ -1.41
SNRNP40-205ENST00000486941 NOL6Q9H6R4 1146 aaKnown RBP6.22□□□□□ -1.41
SNRNP40-205ENST00000486941 GINM1Q9NU53 330 aa6.22□□□□□ -1.41
SNRNP40-205ENST00000486941 PZPP20742 1482 aa6.22□□□□□ -1.41
SNRNP40-205ENST00000486941 CAMSAP2Q08AD1 1489 aa6.22□□□□□ -1.41
SNRNP40-205ENST00000486941 NCOA2Q15596 1464 aa6.22□□□□□ -1.41
SNRNP40-205ENST00000486941 KDM5DQ9BY66 1539 aa6.21□□□□□ -1.42
SNRNP40-205ENST00000486941 F8W031 263 aaPredicted RBP6.21□□□□□ -1.42
SNRNP40-205ENST00000486941 TOM1O60784 492 aa6.21□□□□□ -1.42
SNRNP40-205ENST00000486941 CD3EP07766 207 aa6.21□□□□□ -1.42
SNRNP40-205ENST00000486941 GLI4P10075 376 aa6.21□□□□□ -1.42
SNRNP40-205ENST00000486941 CAP1Q01518 475 aa6.21□□□□□ -1.42
SNRNP40-205ENST00000486941 TMEM62Q0P6H9 643 aa6.21□□□□□ -1.42
SNRNP40-205ENST00000486941 CWF19L1Q69YN2 538 aaKnown RBP6.21□□□□□ -1.42
SNRNP40-205ENST00000486941 BICRALQ6AI39 1079 aa6.21□□□□□ -1.42
SNRNP40-205ENST00000486941 ZDHHC15Q96MV8 337 aa6.21□□□□□ -1.42
SNRNP40-205ENST00000486941 PCDHB10Q9UN67 800 aa6.21□□□□□ -1.42
SNRNP40-205ENST00000486941 MIA2Q96PC5 1412 aa6.21□□□□□ -1.42
SNRNP40-205ENST00000486941 ARHGEF5Q12774 1597 aa6.21□□□□□ -1.42
SNRNP40-205ENST00000486941 NLRP1Q9C000 1473 aa6.21□□□□□ -1.42
SNRNP40-205ENST00000486941 CFAP65Q6ZU64 1925 aaKnown RBP6.21□□□□□ -1.42
SNRNP40-205ENST00000486941 CPS1P31327 1500 aa6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 NEURL4Q96JN8 1562 aa6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 VAMP4O75379 141 aa6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 ASGR2P07307 311 aa6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 IMPDH2P12268 514 aa6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 PPP2R5DQ14738 602 aa6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 RTP5Q14D33 572 aa6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 FBXW10Q5XX13 1052 aa6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 FRMD5Q7Z6J6 570 aa6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 PRRT2Q7Z6L0 340 aaPredicted RBP6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 JAMLQ86YT9 394 aa6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 SP8Q8IXZ3 490 aa6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 ZNF513Q8N8E2 541 aaPredicted RBP6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 SMARCC1Q92922 1105 aaPredicted RBP6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 TEPSINQ96N21 525 aa6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 KLHL25Q9H0H3 589 aa6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 SUSD2Q9UGT4 822 aa6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 SHANK2Q9UPX8 1470 aa6.2□□□□□ -1.42
SNRNP40-205ENST00000486941 DEPDC5O75140 1603 aa6.19□□□□□ -1.42
SNRNP40-205ENST00000486941 A0A087WZG4 1122 aa6.19□□□□□ -1.42
SNRNP40-205ENST00000486941 AURKAO14965 403 aa6.19□□□□□ -1.42
SNRNP40-205ENST00000486941 CYP2R1Q6VVX0 501 aa6.19□□□□□ -1.42
SNRNP40-205ENST00000486941 LIPIQ6XZB0 460 aa6.19□□□□□ -1.42
SNRNP40-205ENST00000486941 SAPCD2Q86UD0 394 aa6.19□□□□□ -1.42
SNRNP40-205ENST00000486941 ADCY4Q8NFM4 1077 aa6.19□□□□□ -1.42
SNRNP40-205ENST00000486941 KLHL6Q8WZ60 621 aa6.19□□□□□ -1.42
SNRNP40-205ENST00000486941 NOX5Q96PH1 765 aa6.19□□□□□ -1.42
SNRNP40-205ENST00000486941 SYT3Q9BQG1 590 aa6.19□□□□□ -1.42
SNRNP40-205ENST00000486941 DUSP10Q9Y6W6 482 aa6.19□□□□□ -1.42
SNRNP40-205ENST00000486941 MED14O60244 1454 aa6.19□□□□□ -1.42
SNRNP40-205ENST00000486941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.18□□□□□ -1.42
SNRNP40-205ENST00000486941 UGGT1Q9NYU2 1555 aa6.18□□□□□ -1.42
SNRNP40-205ENST00000486941 RNF17Q9BXT8 1623 aaKnown RBP6.18□□□□□ -1.42
SNRNP40-205ENST00000486941 CELA3BP08861 270 aa6.18□□□□□ -1.42
SNRNP40-205ENST00000486941 L1CAMP32004 1257 aa6.18□□□□□ -1.42
SNRNP40-205ENST00000486941 HSPA1LP34931 641 aa6.18□□□□□ -1.42
SNRNP40-205ENST00000486941 NOP2P46087 812 aaKnown RBP6.18□□□□□ -1.42
SNRNP40-205ENST00000486941 RCSD1Q6JBY9 416 aa6.18□□□□□ -1.42
SNRNP40-205ENST00000486941 METTL16Q86W50 562 aaKnown RBP6.18□□□□□ -1.42
SNRNP40-205ENST00000486941 HAUS7Q99871 368 aa6.18□□□□□ -1.42
SNRNP40-205ENST00000486941 SPATA25Q9BR10 227 aa6.18□□□□□ -1.42
SNRNP40-205ENST00000486941 MTA3Q9BTC8 594 aa6.18□□□□□ -1.42
SNRNP40-205ENST00000486941 VWDEQ8N2E2 1590 aa6.18□□□□□ -1.42
SNRNP40-205ENST00000486941 MAST1Q9Y2H9 1570 aa6.18□□□□□ -1.42
SNRNP40-205ENST00000486941 NPHP4O75161 1426 aaPredicted RBP6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 ZC3H13Q5T200 1668 aaKnown RBP6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 LRRC9Q6ZRR7 1453 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 MAP3K1Q13233 1512 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 A0A1W2PQ27 194 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 A0A1W2PQ64 194 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 A0A1W2PQC6 194 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 A0A1W2PQD8 194 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 A0A1W2PQH9 124 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 STXBP3O00186 592 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 ITGA4P13612 1032 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 PFKLP17858 780 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 PMLP29590 882 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 KCNC1P48547 511 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 CORO7P57737 925 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 EFEMP1Q12805 493 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 PAK2Q13177 524 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 FGD4Q96M96 766 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 KRTAP17-1Q9BYP8 105 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 METTL5Q9NRN9 209 aaKnown RBP6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 SPATA6Q9NWH7 488 aaPredicted RBP6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 DIS3Q9Y2L1 958 aaKnown RBP6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 SF3B6Q9Y3B4 125 aaKnown RBP6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 RWDD3Q9Y3V2 267 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 EIF2AK4Q9P2K8 1649 aaKnown RBP6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 IQGAP1P46940 1657 aa6.17□□□□□ -1.42
SNRNP40-205ENST00000486941 VPS8Q8N3P4 1428 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms