RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 RNF26Q9BY78 433 aaPredicted RBP20.92■□□□□ 0.94
COL1A1-207ENST00000486572 KIAA1217Q5T5P2 1943 aa20.92■□□□□ 0.94
COL1A1-207ENST00000486572 CPLX1O14810 134 aa20.91■□□□□ 0.94
COL1A1-207ENST00000486572 ADCY7P51828 1080 aa20.91■□□□□ 0.94
COL1A1-207ENST00000486572 AK2P54819 239 aa20.91■□□□□ 0.94
COL1A1-207ENST00000486572 STK3Q13188 491 aa20.91■□□□□ 0.94
COL1A1-207ENST00000486572 UBE2SQ16763 222 aa20.91■□□□□ 0.94
COL1A1-207ENST00000486572 C1orf53Q5VUE5 145 aa20.91■□□□□ 0.94
COL1A1-207ENST00000486572 CCDC62Q6P9F0 684 aa20.91■□□□□ 0.94
COL1A1-207ENST00000486572 OR6J1Q8NGC5 347 aa20.91■□□□□ 0.94
COL1A1-207ENST00000486572 GLT1D1Q96MS3 346 aa20.91■□□□□ 0.94
COL1A1-207ENST00000486572 RIC8AQ9NPQ8 531 aa20.91■□□□□ 0.94
COL1A1-207ENST00000486572 STARD7Q9NQZ5 370 aa20.91■□□□□ 0.94
COL1A1-207ENST00000486572 SPDYE3A6NKU9 549 aa20.9■□□□□ 0.94
COL1A1-207ENST00000486572 ZEB2O60315 1214 aa20.9■□□□□ 0.94
COL1A1-207ENST00000486572 RGS20O76081 388 aa20.9■□□□□ 0.94
COL1A1-207ENST00000486572 CPT1AP50416 773 aa20.9■□□□□ 0.94
COL1A1-207ENST00000486572 RTP1P59025 263 aa20.9■□□□□ 0.94
COL1A1-207ENST00000486572 PKN1Q16512 942 aa20.9■□□□□ 0.94
COL1A1-207ENST00000486572 COPS5Q92905 334 aa20.9■□□□□ 0.94
COL1A1-207ENST00000486572 SLC26A6Q9BXS9 759 aa20.9■□□□□ 0.94
COL1A1-207ENST00000486572 TPCN1Q9ULQ1 816 aa20.9■□□□□ 0.94
COL1A1-207ENST00000486572 MRVI1Q9Y6F6 885 aa20.9■□□□□ 0.94
COL1A1-207ENST00000486572 ELP1O95163 1332 aa20.89■□□□□ 0.93
COL1A1-207ENST00000486572 SMCO2A6NFE2 343 aa20.89■□□□□ 0.93
COL1A1-207ENST00000486572 PPFIA3O75145 1194 aa20.89■□□□□ 0.93
COL1A1-207ENST00000486572 STAM2O75886 525 aa20.89■□□□□ 0.93
COL1A1-207ENST00000486572 NEK4P51957 841 aa20.89■□□□□ 0.93
COL1A1-207ENST00000486572 LY6KQ17RY6 165 aa20.89■□□□□ 0.93
COL1A1-207ENST00000486572 PCNX4Q63HM2 1172 aa20.89■□□□□ 0.93
COL1A1-207ENST00000486572 XRRA1Q6P2D8 792 aa20.89■□□□□ 0.93
COL1A1-207ENST00000486572 KCNV1Q6PIU1 500 aa20.89■□□□□ 0.93
COL1A1-207ENST00000486572 CPLX2Q6PUV4 134 aaKnown RBP20.89■□□□□ 0.93
COL1A1-207ENST00000486572 TRIM22Q8IYM9 498 aa20.89■□□□□ 0.93
COL1A1-207ENST00000486572 CCDC12Q8WUD4 166 aaPredicted RBP20.89■□□□□ 0.93
COL1A1-207ENST00000486572 GLT8D2Q9H1C3 349 aa20.89■□□□□ 0.93
COL1A1-207ENST00000486572 SLKQ9H2G2 1235 aaPredicted RBP20.89■□□□□ 0.93
COL1A1-207ENST00000486572 ATP11BQ9Y2G3 1177 aa20.89■□□□□ 0.93
COL1A1-207ENST00000486572 CEP290O15078 2479 aa20.88■□□□□ 0.93
COL1A1-207ENST00000486572 CABYRO75952 493 aa20.88■□□□□ 0.93
COL1A1-207ENST00000486572 GH1P01241 217 aa20.88■□□□□ 0.93
COL1A1-207ENST00000486572 MRPS9P82933 396 aaKnown RBP20.88■□□□□ 0.93
COL1A1-207ENST00000486572 GNPTABQ3T906 1256 aa20.88■□□□□ 0.93
COL1A1-207ENST00000486572 TRIM60Q495X7 471 aa20.88■□□□□ 0.93
COL1A1-207ENST00000486572 BRDTQ58F21 947 aaPredicted RBP20.88■□□□□ 0.93
COL1A1-207ENST00000486572 CXCL17Q6UXB2 119 aa20.88■□□□□ 0.93
COL1A1-207ENST00000486572 ZFP91Q96JP5 570 aaPredicted RBP20.88■□□□□ 0.93
COL1A1-207ENST00000486572 INPP4AQ96PE3 977 aaPredicted RBP20.88■□□□□ 0.93
COL1A1-207ENST00000486572 EHMT1Q9H9B1 1298 aa20.88■□□□□ 0.93
COL1A1-207ENST00000486572 DDX41Q9UJV9 622 aaKnown RBP20.88■□□□□ 0.93
COL1A1-207ENST00000486572 ESYT2A0FGR8 921 aa20.87■□□□□ 0.93
COL1A1-207ENST00000486572 PFKFB2O60825 505 aa20.87■□□□□ 0.93
COL1A1-207ENST00000486572 SSRP1Q08945 709 aaKnown RBP20.87■□□□□ 0.93
COL1A1-207ENST00000486572 SCRN1Q12765 414 aa20.87■□□□□ 0.93
COL1A1-207ENST00000486572 VTI1AQ96AJ9 217 aa20.87■□□□□ 0.93
COL1A1-207ENST00000486572 C22orf23Q9BZE7 217 aa20.87■□□□□ 0.93
COL1A1-207ENST00000486572 POLR3EQ9NVU0 708 aa20.87■□□□□ 0.93
COL1A1-207ENST00000486572 PCDHA6Q9UN73 950 aa20.87■□□□□ 0.93
COL1A1-207ENST00000486572 PCDHA8Q9Y5H6 950 aa20.87■□□□□ 0.93
COL1A1-207ENST00000486572 GTF3C3Q9Y5Q9 886 aa20.87■□□□□ 0.93
COL1A1-207ENST00000486572 A0A0U1RQG5 324 aaPredicted RBP20.86■□□□□ 0.93
COL1A1-207ENST00000486572 A6NJR5 290 aa20.86■□□□□ 0.93
COL1A1-207ENST00000486572 CDKL5O76039 1030 aa20.86■□□□□ 0.93
COL1A1-207ENST00000486572 FOSP01100 380 aaPredicted RBP20.86■□□□□ 0.93
COL1A1-207ENST00000486572 TGFB3P10600 412 aa20.86■□□□□ 0.93
COL1A1-207ENST00000486572 ARHGAP1Q07960 439 aa20.86■□□□□ 0.93
COL1A1-207ENST00000486572 CCDC148Q8NFR7 591 aa20.86■□□□□ 0.93
COL1A1-207ENST00000486572 ZMYND12Q9H0C1 365 aa20.86■□□□□ 0.93
COL1A1-207ENST00000486572 ZMYND8Q9ULU4 1186 aaPredicted RBP20.86■□□□□ 0.93
COL1A1-207ENST00000486572 DEXIO95424 95 aa20.85■□□□□ 0.93
COL1A1-207ENST00000486572 SYN1P17600 705 aa20.85■□□□□ 0.93
COL1A1-207ENST00000486572 RBM25P49756 843 aaKnown RBP20.85■□□□□ 0.93
COL1A1-207ENST00000486572 CLK2P49760 499 aaKnown RBP20.85■□□□□ 0.93
COL1A1-207ENST00000486572 AP3B2Q13367 1082 aa20.85■□□□□ 0.93
COL1A1-207ENST00000486572 EMID1Q96A84 441 aaPredicted RBP20.85■□□□□ 0.93
COL1A1-207ENST00000486572 UPF2Q9HAU5 1272 aaKnown RBP20.85■□□□□ 0.93
COL1A1-207ENST00000486572 C6orf50Q9HD87 102 aa20.85■□□□□ 0.93
COL1A1-207ENST00000486572 RTEL1Q9NZ71 1219 aa20.85■□□□□ 0.93
COL1A1-207ENST00000486572 FIBPO43427 364 aa20.84■□□□□ 0.93
COL1A1-207ENST00000486572 PQBP1O60828 265 aaKnown RBP20.84■□□□□ 0.93
COL1A1-207ENST00000486572 MYL3P08590 195 aa20.84■□□□□ 0.93
COL1A1-207ENST00000486572 UBA1P22314 1058 aaKnown RBP20.84■□□□□ 0.93
COL1A1-207ENST00000486572 GNA11P29992 359 aa20.84■□□□□ 0.93
COL1A1-207ENST00000486572 ICAM3P32942 547 aa20.84■□□□□ 0.93
COL1A1-207ENST00000486572 PURAQ00577 322 aaKnown RBP20.84■□□□□ 0.93
COL1A1-207ENST00000486572 TLE2Q04725 743 aa20.84■□□□□ 0.93
COL1A1-207ENST00000486572 ANKRD33Q7Z3H0 272 aa20.84■□□□□ 0.93
COL1A1-207ENST00000486572 DHX37Q8IY37 1157 aaKnown RBP20.84■□□□□ 0.93
COL1A1-207ENST00000486572 AFG1LQ8WV93 481 aa20.84■□□□□ 0.93
COL1A1-207ENST00000486572 ANO3Q9BYT9 981 aa20.84■□□□□ 0.93
COL1A1-207ENST00000486572 SH3GLB2Q9NR46 395 aa20.84■□□□□ 0.93
COL1A1-207ENST00000486572 VPS54Q9P1Q0 977 aa20.84■□□□□ 0.93
COL1A1-207ENST00000486572 DNAH12Q6ZR08 3092 aa20.84■□□□□ 0.93
COL1A1-207ENST00000486572 MROH7Q68CQ1 1323 aa20.83■□□□□ 0.93
COL1A1-207ENST00000486572 SPATA31C2B4DYI2 1134 aa20.83■□□□□ 0.93
COL1A1-207ENST00000486572 ARVCFO00192 962 aa20.83■□□□□ 0.93
COL1A1-207ENST00000486572 KPNA6O60684 536 aa20.83■□□□□ 0.93
COL1A1-207ENST00000486572 GGPS1O95749 300 aa20.83■□□□□ 0.93
COL1A1-207ENST00000486572 MMP3P08254 477 aa20.83■□□□□ 0.93
COL1A1-207ENST00000486572 LAMC2Q13753 1193 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms