RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 PCDHB10Q9UN67 800 aa5.58□□□□□ -1.52
R3HDM1-217ENST00000486532 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-217ENST00000486532 KCNH1O95259 989 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 NTRK1P04629 796 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 MAGEA10P43363 369 aaPredicted RBP5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 SLC6A11P48066 632 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 CHRNA2Q15822 529 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 MROH9Q5TGP6 573 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 E4F1Q66K89 784 aaPredicted RBP5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 NOL8Q76FK4 1167 aaKnown RBP5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 GGNQ86UU5 652 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 ZNF761Q86XN6 746 aaPredicted RBP5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 ADGRG2Q8IZP9 1017 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 LGI4Q8N135 537 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 TTC9BQ8N6N2 239 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 GPATCH11Q8N954 259 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 KYQ8NBH2 561 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 COPS5Q92905 334 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 YTHDC1Q96MU7 727 aaKnown RBP5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 RXFP1Q9HBX9 757 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 CYP26B1Q9NR63 512 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 PLA2G2DQ9UNK4 145 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 EMC9Q9Y3B6 208 aa5.57□□□□□ -1.52
R3HDM1-217ENST00000486532 CADPSQ9ULU8 1353 aa5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 MYO1BO43795 1136 aa5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 RECKO95980 971 aa5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 ITGB3P05106 788 aa5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 RPL13P26373 211 aaKnown RBP5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 NASPP49321 788 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 SCRN1Q12765 414 aa5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 SURF1Q15526 300 aa5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 ADAMTS17Q8TE56 1095 aa5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 DDX1Q92499 740 aaKnown RBP5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 SHDQ96IW2 340 aa5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 SAMD11Q96NU1 681 aa5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 C11orf84Q9BUA3 381 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 SPATA6Q9NWH7 488 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 SMPD4Q9NXE4 827 aa5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 MARCH2Q9P0N8 246 aa5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 CLEC1BQ9P126 229 aa5.56□□□□□ -1.52
R3HDM1-217ENST00000486532 CYP7B1O75881 506 aa5.55□□□□□ -1.52
R3HDM1-217ENST00000486532 PLS3P13797 630 aa5.55□□□□□ -1.52
R3HDM1-217ENST00000486532 INSRRP14616 1297 aa5.55□□□□□ -1.52
R3HDM1-217ENST00000486532 RPL11P62913 178 aaKnown RBP5.55□□□□□ -1.52
R3HDM1-217ENST00000486532 METTL16Q86W50 562 aaKnown RBP5.55□□□□□ -1.52
R3HDM1-217ENST00000486532 MIB1Q86YT6 1006 aa5.55□□□□□ -1.52
R3HDM1-217ENST00000486532 RIOX2Q8IUF8 465 aa5.55□□□□□ -1.52
R3HDM1-217ENST00000486532 TRIM59Q8IWR1 403 aa5.55□□□□□ -1.52
R3HDM1-217ENST00000486532 PLEKHO2Q8TD55 490 aa5.55□□□□□ -1.52
R3HDM1-217ENST00000486532 CCDC140Q96MF4 163 aa5.55□□□□□ -1.52
R3HDM1-217ENST00000486532 NOX5Q96PH1 765 aa5.55□□□□□ -1.52
R3HDM1-217ENST00000486532 YIPF4Q9BSR8 244 aa5.55□□□□□ -1.52
R3HDM1-217ENST00000486532 BCAS3Q9H6U6 928 aa5.55□□□□□ -1.52
R3HDM1-217ENST00000486532 LOC102724159A0A0B4J2E5 919 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 MROH6A6NGR9 719 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 C22orf46C9J442 243 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 PPP1R11O60927 126 aaPredicted RBP5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 PLATP00750 562 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 THBDP07204 575 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 THBS2P35442 1172 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 NKX3-2P78367 333 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 KCNAB2Q13303 367 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 PWP2Q15269 919 aaKnown RBP5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 GORABQ5T7V8 394 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 CD300LDQ6UXZ3 194 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 PLEKHH3Q7Z736 793 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 NT5DC4Q86YG4 428 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 FAM126BQ8IXS8 530 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 PPP1R14AQ96A00 147 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 WRNIP1Q96S55 665 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 NKX2-4Q9H2Z4 354 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 TMPRSS5Q9H3S3 457 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 COA3Q9Y2R0 106 aaPredicted RBP5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 RIPOR2Q9Y4F9 1068 aa5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 TIMM13Q9Y5L4 95 aaPredicted RBP5.54□□□□□ -1.52
R3HDM1-217ENST00000486532 C9orf118A6NHY6 69 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 CPP00450 1065 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 C8BP07358 591 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 HOXC12P31275 282 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 KRTAP10-2P60368 255 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 ADAM17P78536 824 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 SMAD4Q13485 552 aaKnown RBP5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 PUM1Q14671 1186 aaKnown RBP eCLIP5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 RGL3Q3MIN7 710 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 TNNI3KQ59H18 835 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 CPZQ66K79 652 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 GTF2IRD2BQ6EKJ0 949 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 GTF2IRD2Q86UP8 949 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 CHST13Q8NET6 341 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 TRMT2BQ96GJ1 504 aaKnown RBP5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 GORASP1Q9BQQ3 440 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 ANP32EQ9BTT0 268 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 TGIF2Q9GZN2 237 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 FBLN5Q9UBX5 448 aa5.53□□□□□ -1.52
R3HDM1-217ENST00000486532 GLB1LQ6UWU2 654 aa5.52□□□□□ -1.53
R3HDM1-217ENST00000486532 MILR1Q7Z6M3 343 aa5.52□□□□□ -1.53
R3HDM1-217ENST00000486532 VPS37DQ86XT2 251 aa5.52□□□□□ -1.53
R3HDM1-217ENST00000486532 CNPY4Q8N129 248 aa5.52□□□□□ -1.53
R3HDM1-217ENST00000486532 ZNF513Q8N8E2 541 aaPredicted RBP5.52□□□□□ -1.53
R3HDM1-217ENST00000486532 DIO2Q92813 273 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms